| Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
|---|---|
| Accession | NC_009972 |
| Length | 6,346,587 |
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The map label for this gene is 159899597
Identifier: 159899597
GI number: 159899597
Start: 3887894
End: 3888796
Strand: Reverse
Name: 159899597
Synonym: Haur_3078
Alternate gene names: NA
Gene position: 3888796-3887894 (Counterclockwise)
Preceding gene: 159899609
Following gene: 159899595
Centisome position: 61.27
GC content: 51.38
Gene sequence:
>903_bases ATGCTAATCCTTTTTCCTGCCGAGCCATTTAATTTGCCGCATGTTGATGCTGCATATGCTGCGGAAGTTGCTGCCTCCGC CCAACTTAGGCTAGCTTGGGCGGTCATCGATCTTGAGGCTTTATTTGATGGTGCGATCAAGCAGGCCTTACGCCGTGTGC CTGTTGCTTCCGCGCCAACTCTCGCCATCTATCGTGGTTGGATGCTCAGCCTTGCCCAGTATCAACAACTCGCACAGGGC TTGGCGGCTAAAAACTATCAATTAATTAACGATCCTGCTGCATATGCCGCTTGTCATCATTTGCCGAATGTGTTGCCCTT GCTTGGCGACCAAACGCCAGCAAGTCTCGTTTTTCCTCAATCCCAAGGCTTGGATGCTGCCAGCATTGCTGCCCAAGCAG CAGTCTATTTTAATCAGCAAGCGTTGATCATCAAAGACTATGTGAAATCGCGTAAACATGAATGGTATGAAGCTTGTTTC ATTCCCAATGCTAGCGACCAAGCCCAAAGTGCCCGCGTGATTCAGACGTTTATTGAGCGCCAAGCTGAGGCTTTGGTTGG TGGGGTGGTGCTGCGGGCATGGCATCCATTGCAGATTTGGCAAACACACCAGCAAAGTGGCTTAGCCTTGGCCTACGAGT ATCGCAGCTTTTGGCTTGATGGCACGCTGTTGTGGGCTACGCCCTACTGGGATCATCAACCGAGCCAGCCAACCCCTGAT TGGTCGCGCTATACCGCGCTGGCCCAACAAATCCAAAGTCGCTTTTGGACATTGGATCTGGCCTTGACCCAAACAGGCGA TTGGCTGATTATCGAACTTGGCGATGCACAAGTATCGGGTTTGCCCGATCATGCTGATGCCCAGGAACTATTGCAAGCCT TGGCTCAACAGTTGACTATCTAA
Upstream 100 bases:
>100_bases GGCTGGAGGAGATTGCTTGGAAATACCAACAATTGCTCCAATAGCCAAAAGCCAATAGCCTAGCTCTTTATCCTTCGTGG ATCAATTATAATTATCCATT
Downstream 100 bases:
>100_bases TCTTGGGCAAGCCAAGCTTCGGCTTTGGCAAGGGTTGCACAGAAATAACAATGGCCTTGTTTGTTTTCCTCGCCTGCCAT CTCGGCAAAATATTGACTAT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 300; Mature: 300
Protein sequence:
>300_residues MLILFPAEPFNLPHVDAAYAAEVAASAQLRLAWAVIDLEALFDGAIKQALRRVPVASAPTLAIYRGWMLSLAQYQQLAQG LAAKNYQLINDPAAYAACHHLPNVLPLLGDQTPASLVFPQSQGLDAASIAAQAAVYFNQQALIIKDYVKSRKHEWYEACF IPNASDQAQSARVIQTFIERQAEALVGGVVLRAWHPLQIWQTHQQSGLALAYEYRSFWLDGTLLWATPYWDHQPSQPTPD WSRYTALAQQIQSRFWTLDLALTQTGDWLIIELGDAQVSGLPDHADAQELLQALAQQLTI
Sequences:
>Translated_300_residues MLILFPAEPFNLPHVDAAYAAEVAASAQLRLAWAVIDLEALFDGAIKQALRRVPVASAPTLAIYRGWMLSLAQYQQLAQG LAAKNYQLINDPAAYAACHHLPNVLPLLGDQTPASLVFPQSQGLDAASIAAQAAVYFNQQALIIKDYVKSRKHEWYEACF IPNASDQAQSARVIQTFIERQAEALVGGVVLRAWHPLQIWQTHQQSGLALAYEYRSFWLDGTLLWATPYWDHQPSQPTPD WSRYTALAQQIQSRFWTLDLALTQTGDWLIIELGDAQVSGLPDHADAQELLQALAQQLTI >Mature_300_residues MLILFPAEPFNLPHVDAAYAAEVAASAQLRLAWAVIDLEALFDGAIKQALRRVPVASAPTLAIYRGWMLSLAQYQQLAQG LAAKNYQLINDPAAYAACHHLPNVLPLLGDQTPASLVFPQSQGLDAASIAAQAAVYFNQQALIIKDYVKSRKHEWYEACF IPNASDQAQSARVIQTFIERQAEALVGGVVLRAWHPLQIWQTHQQSGLALAYEYRSFWLDGTLLWATPYWDHQPSQPTPD WSRYTALAQQIQSRFWTLDLALTQTGDWLIIELGDAQVSGLPDHADAQELLQALAQQLTI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 33325; Mature: 33325
Theoretical pI: Translated: 5.02; Mature: 5.02
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 0.7 %Met (Translated Protein) 1.3 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 1.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLILFPAEPFNLPHVDAAYAAEVAASAQLRLAWAVIDLEALFDGAIKQALRRVPVASAPT CEEEECCCCCCCCCCCHHHHHHHHHHHHEEEEHHHHHHHHHHHHHHHHHHHHCCCCCCCH LAIYRGWMLSLAQYQQLAQGLAAKNYQLINDPAAYAACHHLPNVLPLLGDQTPASLVFPQ HHHHHHHHHHHHHHHHHHHHHHHCCCEEECCHHHHHHHHHCCCHHHHCCCCCCCEEECCC SQGLDAASIAAQAAVYFNQQALIIKDYVKSRKHEWYEACFIPNASDQAQSARVIQTFIER CCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHCCCHHHHEECCCCCCHHHHHHHHHHHHHH QAEALVGGVVLRAWHPLQIWQTHQQSGLALAYEYRSFWLDGTLLWATPYWDHQPSQPTPD HHHHHHHHHHHHCCCCHHHHHHHCCCCCEEEEEEHHHEECCEEEEECCCCCCCCCCCCCC WSRYTALAQQIQSRFWTLDLALTQTGDWLIIELGDAQVSGLPDHADAQELLQALAQQLTI HHHHHHHHHHHHHHHEEEEEEEECCCCEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHCC >Mature Secondary Structure MLILFPAEPFNLPHVDAAYAAEVAASAQLRLAWAVIDLEALFDGAIKQALRRVPVASAPT CEEEECCCCCCCCCCCHHHHHHHHHHHHEEEEHHHHHHHHHHHHHHHHHHHHCCCCCCCH LAIYRGWMLSLAQYQQLAQGLAAKNYQLINDPAAYAACHHLPNVLPLLGDQTPASLVFPQ HHHHHHHHHHHHHHHHHHHHHHHCCCEEECCHHHHHHHHHCCCHHHHCCCCCCCEEECCC SQGLDAASIAAQAAVYFNQQALIIKDYVKSRKHEWYEACFIPNASDQAQSARVIQTFIER CCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHCCCHHHHEECCCCCCHHHHHHHHHHHHHH QAEALVGGVVLRAWHPLQIWQTHQQSGLALAYEYRSFWLDGTLLWATPYWDHQPSQPTPD HHHHHHHHHHHHCCCCHHHHHHHCCCCCEEEEEEHHHEECCEEEEECCCCCCCCCCCCCC WSRYTALAQQIQSRFWTLDLALTQTGDWLIIELGDAQVSGLPDHADAQELLQALAQQLTI HHHHHHHHHHHHHHHEEEEEEEECCCCEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA