| Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
|---|---|
| Accession | NC_009972 |
| Length | 6,346,587 |
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The map label for this gene is 159899594
Identifier: 159899594
GI number: 159899594
Start: 3882884
End: 3884548
Strand: Reverse
Name: 159899594
Synonym: Haur_3075
Alternate gene names: NA
Gene position: 3884548-3882884 (Counterclockwise)
Preceding gene: 159899595
Following gene: 159899593
Centisome position: 61.21
GC content: 51.29
Gene sequence:
>1665_bases ATGCTACGAGTGTCGGATGCTCTGCGGGTATTGTTACAAAACCAAACGGTGGTAGGCAACGATTGGCTACCGCCCACCAA AATTCGCTCGCTCTACTTAAATGACCCAGCCGCGATTTGGCTAGAGCATCATGGAGCGGCACATGGCTTTGCGCCTGAAA CGCTCAGTTATGCCTTTATCGATTTTCTGGCCGAAAAAGGTCATCAATTTGAGCTGGCTTGGCTGCAACGCGTCGCGCCC AATGCAGTTCAAGTTTGCGTCGAACCCTATGAAGGCCGCGAAGCCCATCGTGTCGCTCAAACCCTCGACCTGATTGAGGC TAGAACGCCAGTGATTGCCCAACCAGCCTTGTGGTGGCCTGCTGAGCGAATTTTTGGCACGCCCGATCTGATTGTGCTTA GCTCGTGGTTTCGCCAGCAATATCCTGAATTGGCGCATTTGGTCGGCGAAACTGAACATTATTTGGTGCTTGATTTGAAG TTTTCAAGCAACCTTGAAAAGCGCGAAAAAGCTGCTGATTTGAGTTGCTACAGCGCTCAAACTCGTATGTATAGTTATAT GCTAGGCCAGATTCAGGGCATCATGCCACAACATGCCTTCTTAATTACCCGTGATCGCTTGCATAATCCAATTTCGATTC CAATTGAGGCTCAGCTTGGGCAGCCACTTGATGCCGATATTCGCCAAAACTGTGAGCGCTATTTCGAGATTGTGCGCGAT GGCGGCCAATATCTGCCATGGAACGACCCGATTGTGCAACTGAACCCGAATGTTAACGATGAACGTTGGGGCAAAGCCCG TGCCCAAATTCGCCAACGCCAGCCAGGTGGCGAGATGCTGCGGCTCTGGAATATAGGGGCAGCGGCCCAACAAAAATTGG TCAAAGCTGGCATTACCAGCTTGTCCAGCCTCATGAACGCCGCTAGCCAAAGCCTGCCCAAGGGCGTGATGAAGTATCCC GACCCAATGAAGGCCATTATGCAAGCCAACCATACTGGCCTTGCGCAACGCGCCCAAGGCATTGCACCAACCACCAGACC TTACGAGTTTTTTGTTGATTTTGAGTTTTTCAGCAATCTGAATGTAAATTTTGAGCAGCAATGGCCCACGCTCCAAGGCA CGCCCATGATTTTTATGATTGGGATTGGCTGGCTGGCAAACGGTGAGTGGCACTATCACGAGTGTATTGCTGAGCGCGAA GATCATCTCGCTGAGCAAGCAATCTTGGCTGAATTTATCGCCGTTTTACAAGCCCAAACCAATCAGCAACTTGATCAAGC GGTGCTCTACCATTGGCATAACGCTGAGCCAGTTGAATGTCGCCATGCTGCGGCCCGTCATCAACTGCCCAGCGATCATC TGTTGCTCAATTTGCCATGGTTCGATTTGAAAAATGTTTTGGTCGATAATGCCTGTGCTGTGCCTGGCGCTTGGGATTAT TCGCTCAAGAGCATCGCCAAAGCGTTGGCCGCGCTCGATGCCCAATATGATCCAGCCTGGCCCAGCGATTTAGCCGATGG CTCCCAAGCGCAGTTAGTTGGTTGGTATGCCTATCGCCAGCCCAACCCGCGCACTAGCGCTGAAATGCAATTACTCAGCC GTTATTTAGAGGCCGATTGCCGCGCGACCTGGAAAATTTTGGCTTGGCTACGAGCTGATGATTAA
Upstream 100 bases:
>100_bases TAAAAACCCATTGCTCTTTATTCATCCTTCATCCTTCATCCCTCATCCTTGTCTTATGGTATGCTTAGCCCAATTTGCCA GCGTACCAGAGGGATGTTGT
Downstream 100 bases:
>100_bases TAATGTTAATAGATAGGCCATAGTTTGCTGGTTTCATGGCTGCAACGGCTGTGCTAGATTGAGCAGCAGTTGTTGTGGAA AGGAATCGCTGGCTATGCAA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 554; Mature: 554
Protein sequence:
>554_residues MLRVSDALRVLLQNQTVVGNDWLPPTKIRSLYLNDPAAIWLEHHGAAHGFAPETLSYAFIDFLAEKGHQFELAWLQRVAP NAVQVCVEPYEGREAHRVAQTLDLIEARTPVIAQPALWWPAERIFGTPDLIVLSSWFRQQYPELAHLVGETEHYLVLDLK FSSNLEKREKAADLSCYSAQTRMYSYMLGQIQGIMPQHAFLITRDRLHNPISIPIEAQLGQPLDADIRQNCERYFEIVRD GGQYLPWNDPIVQLNPNVNDERWGKARAQIRQRQPGGEMLRLWNIGAAAQQKLVKAGITSLSSLMNAASQSLPKGVMKYP DPMKAIMQANHTGLAQRAQGIAPTTRPYEFFVDFEFFSNLNVNFEQQWPTLQGTPMIFMIGIGWLANGEWHYHECIAERE DHLAEQAILAEFIAVLQAQTNQQLDQAVLYHWHNAEPVECRHAAARHQLPSDHLLLNLPWFDLKNVLVDNACAVPGAWDY SLKSIAKALAALDAQYDPAWPSDLADGSQAQLVGWYAYRQPNPRTSAEMQLLSRYLEADCRATWKILAWLRADD
Sequences:
>Translated_554_residues MLRVSDALRVLLQNQTVVGNDWLPPTKIRSLYLNDPAAIWLEHHGAAHGFAPETLSYAFIDFLAEKGHQFELAWLQRVAP NAVQVCVEPYEGREAHRVAQTLDLIEARTPVIAQPALWWPAERIFGTPDLIVLSSWFRQQYPELAHLVGETEHYLVLDLK FSSNLEKREKAADLSCYSAQTRMYSYMLGQIQGIMPQHAFLITRDRLHNPISIPIEAQLGQPLDADIRQNCERYFEIVRD GGQYLPWNDPIVQLNPNVNDERWGKARAQIRQRQPGGEMLRLWNIGAAAQQKLVKAGITSLSSLMNAASQSLPKGVMKYP DPMKAIMQANHTGLAQRAQGIAPTTRPYEFFVDFEFFSNLNVNFEQQWPTLQGTPMIFMIGIGWLANGEWHYHECIAERE DHLAEQAILAEFIAVLQAQTNQQLDQAVLYHWHNAEPVECRHAAARHQLPSDHLLLNLPWFDLKNVLVDNACAVPGAWDY SLKSIAKALAALDAQYDPAWPSDLADGSQAQLVGWYAYRQPNPRTSAEMQLLSRYLEADCRATWKILAWLRADD >Mature_554_residues MLRVSDALRVLLQNQTVVGNDWLPPTKIRSLYLNDPAAIWLEHHGAAHGFAPETLSYAFIDFLAEKGHQFELAWLQRVAP NAVQVCVEPYEGREAHRVAQTLDLIEARTPVIAQPALWWPAERIFGTPDLIVLSSWFRQQYPELAHLVGETEHYLVLDLK FSSNLEKREKAADLSCYSAQTRMYSYMLGQIQGIMPQHAFLITRDRLHNPISIPIEAQLGQPLDADIRQNCERYFEIVRD GGQYLPWNDPIVQLNPNVNDERWGKARAQIRQRQPGGEMLRLWNIGAAAQQKLVKAGITSLSSLMNAASQSLPKGVMKYP DPMKAIMQANHTGLAQRAQGIAPTTRPYEFFVDFEFFSNLNVNFEQQWPTLQGTPMIFMIGIGWLANGEWHYHECIAERE DHLAEQAILAEFIAVLQAQTNQQLDQAVLYHWHNAEPVECRHAAARHQLPSDHLLLNLPWFDLKNVLVDNACAVPGAWDY SLKSIAKALAALDAQYDPAWPSDLADGSQAQLVGWYAYRQPNPRTSAEMQLLSRYLEADCRATWKILAWLRADD
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 62955; Mature: 62955
Theoretical pI: Translated: 5.92; Mature: 5.92
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLRVSDALRVLLQNQTVVGNDWLPPTKIRSLYLNDPAAIWLEHHGAAHGFAPETLSYAFI CCCHHHHHHHHHCCCEEECCCCCCHHHHHEEEECCCEEEEEECCCCCCCCCHHHHHHHHH DFLAEKGHQFELAWLQRVAPNAVQVCVEPYEGREAHRVAQTLDLIEARTPVIAQPALWWP HHHHHCCCEEHHHHHHHHCCCHHEEEECCCCCCHHHHHHHHHHHHHCCCCCEECCCCCCC AERIFGTPDLIVLSSWFRQQYPELAHLVGETEHYLVLDLKFSSNLEKREKAADLSCYSAQ HHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEECCCHHHHHHHHCCHHHHHH TRMYSYMLGQIQGIMPQHAFLITRDRLHNPISIPIEAQLGQPLDADIRQNCERYFEIVRD HHHHHHHHHHHHCCCCCHHEEEEHHHCCCCCCCEEECCCCCCCCHHHHHHHHHHHHHHHC GGQYLPWNDPIVQLNPNVNDERWGKARAQIRQRQPGGEMLRLWNIGAAAQQKLVKAGITS CCCCCCCCCCEEEECCCCCHHHHHHHHHHHHHCCCCHHEEEEECCCHHHHHHHHHHHHHH LSSLMNAASQSLPKGVMKYPDPMKAIMQANHTGLAQRAQGIAPTTRPYEFFVDFEFFSNL HHHHHHHHHHHCCHHHHCCCCHHHHHHHCCCCCHHHHHCCCCCCCCCEEEEEEEHHHCCC NVNFEQQWPTLQGTPMIFMIGIGWLANGEWHYHECIAEREDHLAEQAILAEFIAVLQAQT CCCCCCCCCCCCCCCEEEEEECHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH NQQLDQAVLYHWHNAEPVECRHAAARHQLPSDHLLLNLPWFDLKNVLVDNACAVPGAWDY HHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCEEEECCCHHHHHHHHCCCCCCCCCCCH SLKSIAKALAALDAQYDPAWPSDLADGSQAQLVGWYAYRQPNPRTSAEMQLLSRYLEADC HHHHHHHHHHHHCCCCCCCCCHHHCCCCCCEEEEEEEECCCCCCCHHHHHHHHHHHHHHH RATWKILAWLRADD HHHHHHHHHHCCCC >Mature Secondary Structure MLRVSDALRVLLQNQTVVGNDWLPPTKIRSLYLNDPAAIWLEHHGAAHGFAPETLSYAFI CCCHHHHHHHHHCCCEEECCCCCCHHHHHEEEECCCEEEEEECCCCCCCCCHHHHHHHHH DFLAEKGHQFELAWLQRVAPNAVQVCVEPYEGREAHRVAQTLDLIEARTPVIAQPALWWP HHHHHCCCEEHHHHHHHHCCCHHEEEECCCCCCHHHHHHHHHHHHHCCCCCEECCCCCCC AERIFGTPDLIVLSSWFRQQYPELAHLVGETEHYLVLDLKFSSNLEKREKAADLSCYSAQ HHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEECCCHHHHHHHHCCHHHHHH TRMYSYMLGQIQGIMPQHAFLITRDRLHNPISIPIEAQLGQPLDADIRQNCERYFEIVRD HHHHHHHHHHHHCCCCCHHEEEEHHHCCCCCCCEEECCCCCCCCHHHHHHHHHHHHHHHC GGQYLPWNDPIVQLNPNVNDERWGKARAQIRQRQPGGEMLRLWNIGAAAQQKLVKAGITS CCCCCCCCCCEEEECCCCCHHHHHHHHHHHHHCCCCHHEEEEECCCHHHHHHHHHHHHHH LSSLMNAASQSLPKGVMKYPDPMKAIMQANHTGLAQRAQGIAPTTRPYEFFVDFEFFSNL HHHHHHHHHHHCCHHHHCCCCHHHHHHHCCCCCHHHHHCCCCCCCCCEEEEEEEHHHCCC NVNFEQQWPTLQGTPMIFMIGIGWLANGEWHYHECIAEREDHLAEQAILAEFIAVLQAQT CCCCCCCCCCCCCCCEEEEEECHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH NQQLDQAVLYHWHNAEPVECRHAAARHQLPSDHLLLNLPWFDLKNVLVDNACAVPGAWDY HHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCEEEECCCHHHHHHHHCCCCCCCCCCCH SLKSIAKALAALDAQYDPAWPSDLADGSQAQLVGWYAYRQPNPRTSAEMQLLSRYLEADC HHHHHHHHHHHHCCCCCCCCCHHHCCCCCCEEEEEEEECCCCCCCHHHHHHHHHHHHHHH RATWKILAWLRADD HHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA