| Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
|---|---|
| Accession | NC_009972 |
| Length | 6,346,587 |
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The map label for this gene is 159899483
Identifier: 159899483
GI number: 159899483
Start: 3739137
End: 3739652
Strand: Reverse
Name: 159899483
Synonym: Haur_2964
Alternate gene names: NA
Gene position: 3739652-3739137 (Counterclockwise)
Preceding gene: 159899484
Following gene: 159899482
Centisome position: 58.92
GC content: 52.33
Gene sequence:
>516_bases ATGACTTCAAATCAAACGGCATTGCTGCTGGAAACAGCGGTGGCGGCGTTATATGCTGGCGACCGTCGCAGCGCCCGAGT TTATTTAACCCAAGCTTTAGCCCTAGAACCCTATAACGAAATCGCCTTGCTCTGGCTGAGTGGCGCGGTTGAGCTGCCCG AACAGCAAATTGCCTGCTTGGAGCGGGTGCTGGCGATCAATCCTTATAATCATGCAGCGATTCGCGGTTTGGCCAGCTTG CGCGGCCCACTTGAGCCGATGGTGGTCGAACCAGAGCCATTGCCGCCTTGGAACCCACCTGAGCCATTGAGTTTGAGCCA ATTGGCTGAATTGCCAGTCTGTTGTTATGCCTGCGATGCCCAATTGTATGCTAGTGCGACCTTTTGTTGGCGCTGCCATG TGCATGTGCGCTGCTGTGCCAATTGTATTTTTAATGGCTATGTTGAATGTAAAACTGAGCAAGCAATTCAATCGGAGCAA CTGCCCAACTGTTGCCCATGGTGGCGACCAATTTAA
Upstream 100 bases:
>100_bases CTTGATCTGCGGACTGTGCTACCTGAGCAGGATGCAGTGCTTATGGCGGCGTTAGCAGCCCTCGATCCAGCCTAACCTGT CATAGAGAGGGACGCAAGCT
Downstream 100 bases:
>100_bases AAGGCTCGCTTTTGACTTCTCTGGCCCCTAATGCTAGCATGGCGGCTATCTGAATTGATTGTATATAGCAGCAATGAGGC AGAATGCGATTATCAACCAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 171; Mature: 170
Protein sequence:
>171_residues MTSNQTALLLETAVAALYAGDRRSARVYLTQALALEPYNEIALLWLSGAVELPEQQIACLERVLAINPYNHAAIRGLASL RGPLEPMVVEPEPLPPWNPPEPLSLSQLAELPVCCYACDAQLYASATFCWRCHVHVRCCANCIFNGYVECKTEQAIQSEQ LPNCCPWWRPI
Sequences:
>Translated_171_residues MTSNQTALLLETAVAALYAGDRRSARVYLTQALALEPYNEIALLWLSGAVELPEQQIACLERVLAINPYNHAAIRGLASL RGPLEPMVVEPEPLPPWNPPEPLSLSQLAELPVCCYACDAQLYASATFCWRCHVHVRCCANCIFNGYVECKTEQAIQSEQ LPNCCPWWRPI >Mature_170_residues TSNQTALLLETAVAALYAGDRRSARVYLTQALALEPYNEIALLWLSGAVELPEQQIACLERVLAINPYNHAAIRGLASLR GPLEPMVVEPEPLPPWNPPEPLSLSQLAELPVCCYACDAQLYASATFCWRCHVHVRCCANCIFNGYVECKTEQAIQSEQL PNCCPWWRPI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19027; Mature: 18896
Theoretical pI: Translated: 4.72; Mature: 4.72
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
7.0 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 8.2 %Cys+Met (Translated Protein) 7.1 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 7.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTSNQTALLLETAVAALYAGDRRSARVYLTQALALEPYNEIALLWLSGAVELPEQQIACL CCCCCHHHHHHHHHHHHHCCCCCCEEEEEEEHHHCCCCCCEEEEEECCCCCCCHHHHHHH ERVLAINPYNHAAIRGLASLRGPLEPMVVEPEPLPPWNPPEPLSLSQLAELPVCCYACDA HHHHHCCCCCHHHHHHHHHHCCCCCCEEECCCCCCCCCCCCCCCHHHHHCCCEEEEECCH QLYASATFCWRCHVHVRCCANCIFNGYVECKTEQAIQSEQLPNCCPWWRPI HHHHCEEEEEEEHHHHHHHHHHHHCCEEEECHHHHHHHHCCCCCCCCCCCC >Mature Secondary Structure TSNQTALLLETAVAALYAGDRRSARVYLTQALALEPYNEIALLWLSGAVELPEQQIACL CCCCHHHHHHHHHHHHHCCCCCCEEEEEEEHHHCCCCCCEEEEEECCCCCCCHHHHHHH ERVLAINPYNHAAIRGLASLRGPLEPMVVEPEPLPPWNPPEPLSLSQLAELPVCCYACDA HHHHHCCCCCHHHHHHHHHHCCCCCCEEECCCCCCCCCCCCCCCHHHHHCCCEEEEECCH QLYASATFCWRCHVHVRCCANCIFNGYVECKTEQAIQSEQLPNCCPWWRPI HHHHCEEEEEEEHHHHHHHHHHHHCCEEEECHHHHHHHHCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA