| Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
|---|---|
| Accession | NC_009972 |
| Length | 6,346,587 |
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The map label for this gene is 159899424
Identifier: 159899424
GI number: 159899424
Start: 3673556
End: 3674629
Strand: Reverse
Name: 159899424
Synonym: Haur_2905
Alternate gene names: NA
Gene position: 3674629-3673556 (Counterclockwise)
Preceding gene: 159899425
Following gene: 159899423
Centisome position: 57.9
GC content: 51.3
Gene sequence:
>1074_bases ATGAAAAAACAGCTTTTAATTGTTGGTTTAATTGTTGGTTTAGCTGGCTGTGGCGCGGCCTCAAACAGCGTTACGACTGT TCCCCAAGTTCTAACAGCACCCGATGCTGCTAACTTGGCTGGCTATTGTGTTGATACTGCACCGATCACCAAGCCCGTGA TCGTCGGCCTCGAAGGCAATATGTGGTCAATTAACGGCGATGGCACAGAGGCCAGTCAATTAACCACCGTCAAGGAACGC ACGCTCATTCGTGATGCAGCATGGTCGCATGATCGCAAAACTTTAGCCTATTCGTTGATGTTGCCGCCAATTGATTTGGC GATTCCGTGGTTGCAATCGAGTATTGTCTGTGGAATCGATGCGGCCACTGGCAAAGGCAGCCTTTTAGCCTATGGCAATA TCGATGTTTCATTAAGTGAGCCAAGCTGGGCTAGTGATAATCAATCGTTGTATTTGACCCGCCGTCGCACCCTGCTCGAC GCGAAAAACCAATTTGTTGGCGAAGAAATTGCCGTCGCACGCTATGCCTTGGGCAGCAACCAAGAAACGGTTGTGGTTGA AGGTGCAACTACACCTGCACTTTCGCCCGATGGTCAACATCTGGTCTATGTGCAGCCGAATGTTGAAATTGGCTTTCCCT CGTTGATGCTTGCCAAACTTGATGGCAGCGCTGCCCAGCCACTCGGCCAGCCAGATCTGCCCTTCAAATCGATTGTCGCC CCGCGCTGGTCGCCCGATGGCAGCAGCATTGTGATGACGGTTGGCGGCGGGCCTGGCGCAATTGGTGGCGGCGCAGAGCC AAGCTTGGCTTGGTGGGAAGTGTTGTTAGGAGTCGAGATTGCTAGTGCTCACGGCGAGCCAGTTTCATTGTGGCAAGTTA ATGCCAATGATGGAGCCTTGAAGCCCTTAGCGCAAAATATTGACGATGGCCGCACAGCCTGGAATCCCGATGGCGAGCAT TTTCTCTTTATCCATGGCTATGATGGATTAATGGAATATACCTTGGCAACTGGTGAAGATCGTGCTTTGACACCCGTGCA ACCCTATTGGTTTTTAGAATGGGCTAGTCACTAA
Upstream 100 bases:
>100_bases CTGCCATTAGTTGGCAAATAACGAACTTAGTAAAACGCGTTACAATACCGCTGAGTGGTTTGCACTCAGCGGTTTGTTTT AATCAAATGGCATAATCATA
Downstream 100 bases:
>100_bases GCATATAGCTAAATATCGTGTACAATAGCGCCACGATCCATCCACACAAGCAGCAAAAGCGTTAGATCTCTACAAGATTC GAGCAAAATCGCAGTTCATG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 357; Mature: 357
Protein sequence:
>357_residues MKKQLLIVGLIVGLAGCGAASNSVTTVPQVLTAPDAANLAGYCVDTAPITKPVIVGLEGNMWSINGDGTEASQLTTVKER TLIRDAAWSHDRKTLAYSLMLPPIDLAIPWLQSSIVCGIDAATGKGSLLAYGNIDVSLSEPSWASDNQSLYLTRRRTLLD AKNQFVGEEIAVARYALGSNQETVVVEGATTPALSPDGQHLVYVQPNVEIGFPSLMLAKLDGSAAQPLGQPDLPFKSIVA PRWSPDGSSIVMTVGGGPGAIGGGAEPSLAWWEVLLGVEIASAHGEPVSLWQVNANDGALKPLAQNIDDGRTAWNPDGEH FLFIHGYDGLMEYTLATGEDRALTPVQPYWFLEWASH
Sequences:
>Translated_357_residues MKKQLLIVGLIVGLAGCGAASNSVTTVPQVLTAPDAANLAGYCVDTAPITKPVIVGLEGNMWSINGDGTEASQLTTVKER TLIRDAAWSHDRKTLAYSLMLPPIDLAIPWLQSSIVCGIDAATGKGSLLAYGNIDVSLSEPSWASDNQSLYLTRRRTLLD AKNQFVGEEIAVARYALGSNQETVVVEGATTPALSPDGQHLVYVQPNVEIGFPSLMLAKLDGSAAQPLGQPDLPFKSIVA PRWSPDGSSIVMTVGGGPGAIGGGAEPSLAWWEVLLGVEIASAHGEPVSLWQVNANDGALKPLAQNIDDGRTAWNPDGEH FLFIHGYDGLMEYTLATGEDRALTPVQPYWFLEWASH >Mature_357_residues MKKQLLIVGLIVGLAGCGAASNSVTTVPQVLTAPDAANLAGYCVDTAPITKPVIVGLEGNMWSINGDGTEASQLTTVKER TLIRDAAWSHDRKTLAYSLMLPPIDLAIPWLQSSIVCGIDAATGKGSLLAYGNIDVSLSEPSWASDNQSLYLTRRRTLLD AKNQFVGEEIAVARYALGSNQETVVVEGATTPALSPDGQHLVYVQPNVEIGFPSLMLAKLDGSAAQPLGQPDLPFKSIVA PRWSPDGSSIVMTVGGGPGAIGGGAEPSLAWWEVLLGVEIASAHGEPVSLWQVNANDGALKPLAQNIDDGRTAWNPDGEH FLFIHGYDGLMEYTLATGEDRALTPVQPYWFLEWASH
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 37852; Mature: 37852
Theoretical pI: Translated: 4.38; Mature: 4.38
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKQLLIVGLIVGLAGCGAASNSVTTVPQVLTAPDAANLAGYCVDTAPITKPVIVGLEGN CCCEEEEEEHHHHHHCCCCCCCCCCCCCHHHCCCCCCCCCEEEEECCCCCCEEEEEECCC MWSINGDGTEASQLTTVKERTLIRDAAWSHDRKTLAYSLMLPPIDLAIPWLQSSIVCGID EEEECCCCCCHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCHHEEEHHHCCCEEEEEE AATGKGSLLAYGNIDVSLSEPSWASDNQSLYLTRRRTLLDAKNQFVGEEIAVARYALGSN CCCCCCCEEEEECEEEEECCCCCCCCCCEEEEEEHHHHHHHHHHHCCHHHEEEEEECCCC QETVVVEGATTPALSPDGQHLVYVQPNVEIGFPSLMLAKLDGSAAQPLGQPDLPFKSIVA CCEEEEECCCCCCCCCCCCEEEEECCCCEECCCEEEEEECCCCCCCCCCCCCCCHHHHCC PRWSPDGSSIVMTVGGGPGAIGGGAEPSLAWWEVLLGVEIASAHGEPVSLWQVNANDGAL CCCCCCCCEEEEEECCCCCCCCCCCCCCHHHHHHHHHEEEECCCCCEEEEEEEECCCCCC KPLAQNIDDGRTAWNPDGEHFLFIHGYDGLMEYTLATGEDRALTPVQPYWFLEWASH CHHHHCCCCCCCCCCCCCCEEEEEECCCCEEEEEEECCCCCCCCCCCCEEEEEECCC >Mature Secondary Structure MKKQLLIVGLIVGLAGCGAASNSVTTVPQVLTAPDAANLAGYCVDTAPITKPVIVGLEGN CCCEEEEEEHHHHHHCCCCCCCCCCCCCHHHCCCCCCCCCEEEEECCCCCCEEEEEECCC MWSINGDGTEASQLTTVKERTLIRDAAWSHDRKTLAYSLMLPPIDLAIPWLQSSIVCGID EEEECCCCCCHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCHHEEEHHHCCCEEEEEE AATGKGSLLAYGNIDVSLSEPSWASDNQSLYLTRRRTLLDAKNQFVGEEIAVARYALGSN CCCCCCCEEEEECEEEEECCCCCCCCCCEEEEEEHHHHHHHHHHHCCHHHEEEEEECCCC QETVVVEGATTPALSPDGQHLVYVQPNVEIGFPSLMLAKLDGSAAQPLGQPDLPFKSIVA CCEEEEECCCCCCCCCCCCEEEEECCCCEECCCEEEEEECCCCCCCCCCCCCCCHHHHCC PRWSPDGSSIVMTVGGGPGAIGGGAEPSLAWWEVLLGVEIASAHGEPVSLWQVNANDGAL CCCCCCCCEEEEEECCCCCCCCCCCCCCHHHHHHHHHEEEECCCCCEEEEEEEECCCCCC KPLAQNIDDGRTAWNPDGEHFLFIHGYDGLMEYTLATGEDRALTPVQPYWFLEWASH CHHHHCCCCCCCCCCCCCCEEEEEECCCCEEEEEEECCCCCCCCCCCCEEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA