| Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
|---|---|
| Accession | NC_009972 |
| Length | 6,346,587 |
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The map label for this gene is 159899294
Identifier: 159899294
GI number: 159899294
Start: 3533192
End: 3534280
Strand: Reverse
Name: 159899294
Synonym: Haur_2775
Alternate gene names: NA
Gene position: 3534280-3533192 (Counterclockwise)
Preceding gene: 159899303
Following gene: 159899292
Centisome position: 55.69
GC content: 52.62
Gene sequence:
>1089_bases ATGGCATCGTCAGTGGCTCTGCCAACGTTTCAATCAACCGCCCGATTATACCGTTGGTTGATTCAACCTGGTGCTGAGGT AGCAGCAGGCCAGCTTGTAGCGTTGGTTGTTGATGCACACGCTGAATGGGCGCTTCCAGCACAGCAAACTGGAACGGTTG CGGCATTATTAGTTGATGAGGGAGCCACCCTCGATGTGACTACTCCATTATTACAATTTGTTGAAATGGTGTCAAAACGC CAACTTACTGTCACCCCACTGGCTCGTTGCATTGCCGAGCGCCATCAACTCGATTTAAGCACAATCAGTGGTACGCTCGC CGATGGGCGGGTGGGCAAACGCGATATTCTGGCGCATTTGCCCGATGTCTCCCCAACGTTAGCTGAGCCAACCGAGCAAC TTGCCGCTCCTGCCGATGGGTTTTGTGTCGCCGAACAGATGGGCAATGCTTTTGCCCAATCTGAGCAAGTAATTGTTGTT GCTGCTCCCAAAAACCCGCCAATCAGCCAAACAACGCCGCCACAAGCAAGCACGCTTCAGCCGTGGACTGAGGCCCAACT CCAGCAGATTCAGCTGCGCCAACTTGCCGCAGCCAGCATTCCCCAAGCCTATTGTTCGCACGCCATCAGCCTCGATCGGT TTGCTTCAACCGAATTAACCGCGCATTTATTGCTCGCCACAATTCAGGTCTTGCAACGCCATCCACTATTACGCAGTGTT TGGTCTGCTGGTGATCGTTTGGAACGGGCTAGTTTGCATATTCAGGTTGAACATCCTTTGGGTCGCTGTAGCATTCCATT CGCCGCCGATTTGAATTTGCGTGGCTTGCAACGGGCATTAACCAGCCCAGCCACTGAGCAAGCTGGGGTGTTTAGCTTCA TTCAAAGTGCGGTGAATTTGTGGAGTGCTGCGCCGATCAACTATGGTCAATCGGCGACGTTGCATATTGGGGCTACCCGC AAAGTGTTGGTTGGCGAGGCATTGCAAATTAGCCAACAAGCGATCGCCACCCTCAGTTATGATACTCGTTTGATCAGTGA TGCTGCTGCCGAGGCATTTTTAGCGGATCTCGCCAAAGCACTGGCTTAA
Upstream 100 bases:
>100_bases ATAGCTTACGTCTCAGCGTGGAGTCACCCCTTGTCGATGGTGCTTGCTCCTGCTAATGTGCTGCTCAACTGTCATTCATG TAGATCACAAAGGAGTGTTC
Downstream 100 bases:
>100_bases TTTAACGATTGAACGGCAATTGCATCGGCCCATGTTAACGTGCCTGGTATGGCGCTAAGCCCAATGCGGCCAATTTGGCC TGGATCAAACCAAAAATCGC
Product: E3 binding domain-containing protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 362; Mature: 361
Protein sequence:
>362_residues MASSVALPTFQSTARLYRWLIQPGAEVAAGQLVALVVDAHAEWALPAQQTGTVAALLVDEGATLDVTTPLLQFVEMVSKR QLTVTPLARCIAERHQLDLSTISGTLADGRVGKRDILAHLPDVSPTLAEPTEQLAAPADGFCVAEQMGNAFAQSEQVIVV AAPKNPPISQTTPPQASTLQPWTEAQLQQIQLRQLAAASIPQAYCSHAISLDRFASTELTAHLLLATIQVLQRHPLLRSV WSAGDRLERASLHIQVEHPLGRCSIPFAADLNLRGLQRALTSPATEQAGVFSFIQSAVNLWSAAPINYGQSATLHIGATR KVLVGEALQISQQAIATLSYDTRLISDAAAEAFLADLAKALA
Sequences:
>Translated_362_residues MASSVALPTFQSTARLYRWLIQPGAEVAAGQLVALVVDAHAEWALPAQQTGTVAALLVDEGATLDVTTPLLQFVEMVSKR QLTVTPLARCIAERHQLDLSTISGTLADGRVGKRDILAHLPDVSPTLAEPTEQLAAPADGFCVAEQMGNAFAQSEQVIVV AAPKNPPISQTTPPQASTLQPWTEAQLQQIQLRQLAAASIPQAYCSHAISLDRFASTELTAHLLLATIQVLQRHPLLRSV WSAGDRLERASLHIQVEHPLGRCSIPFAADLNLRGLQRALTSPATEQAGVFSFIQSAVNLWSAAPINYGQSATLHIGATR KVLVGEALQISQQAIATLSYDTRLISDAAAEAFLADLAKALA >Mature_361_residues ASSVALPTFQSTARLYRWLIQPGAEVAAGQLVALVVDAHAEWALPAQQTGTVAALLVDEGATLDVTTPLLQFVEMVSKRQ LTVTPLARCIAERHQLDLSTISGTLADGRVGKRDILAHLPDVSPTLAEPTEQLAAPADGFCVAEQMGNAFAQSEQVIVVA APKNPPISQTTPPQASTLQPWTEAQLQQIQLRQLAAASIPQAYCSHAISLDRFASTELTAHLLLATIQVLQRHPLLRSVW SAGDRLERASLHIQVEHPLGRCSIPFAADLNLRGLQRALTSPATEQAGVFSFIQSAVNLWSAAPINYGQSATLHIGATRK VLVGEALQISQQAIATLSYDTRLISDAAAEAFLADLAKALA
Specific function: Unknown
COG id: COG0508
COG function: function code C; Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide acyltransferase (E2) component, and related enzymes
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 38597; Mature: 38465
Theoretical pI: Translated: 6.03; Mature: 6.03
Prosite motif: PS50968 BIOTINYL_LIPOYL
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 0.8 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MASSVALPTFQSTARLYRWLIQPGAEVAAGQLVALVVDAHAEWALPAQQTGTVAALLVDE CCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHEEEEEEECCCCCCCCCCCCCCEEEEEECC GATLDVTTPLLQFVEMVSKRQLTVTPLARCIAERHQLDLSTISGTLADGRVGKRDILAHL CCEEEHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCHHHHCCCCCCCCCCHHHHHHHC PDVSPTLAEPTEQLAAPADGFCVAEQMGNAFAQSEQVIVVAAPKNPPISQTTPPQASTLQ CCCCCCCCCCHHHHCCCCCCCHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCCCCCC PWTEAQLQQIQLRQLAAASIPQAYCSHAISLDRFASTELTAHLLLATIQVLQRHPLLRSV CHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHH WSAGDRLERASLHIQVEHPLGRCSIPFAADLNLRGLQRALTSPATEQAGVFSFIQSAVNL HHCCCCEEEEEEEEEEECCCCCCCCCCCCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHH WSAAPINYGQSATLHIGATRKVLVGEALQISQQAIATLSYDTRLISDAAAEAFLADLAKA HHCCCCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LA HC >Mature Secondary Structure ASSVALPTFQSTARLYRWLIQPGAEVAAGQLVALVVDAHAEWALPAQQTGTVAALLVDE CCCCCCCCHHHHHHHHHHHHCCCCHHHHHHEEEEEEECCCCCCCCCCCCCCEEEEEECC GATLDVTTPLLQFVEMVSKRQLTVTPLARCIAERHQLDLSTISGTLADGRVGKRDILAHL CCEEEHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCHHHHCCCCCCCCCCHHHHHHHC PDVSPTLAEPTEQLAAPADGFCVAEQMGNAFAQSEQVIVVAAPKNPPISQTTPPQASTLQ CCCCCCCCCCHHHHCCCCCCCHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCCCCCC PWTEAQLQQIQLRQLAAASIPQAYCSHAISLDRFASTELTAHLLLATIQVLQRHPLLRSV CHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHH WSAGDRLERASLHIQVEHPLGRCSIPFAADLNLRGLQRALTSPATEQAGVFSFIQSAVNL HHCCCCEEEEEEEEEEECCCCCCCCCCCCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHH WSAAPINYGQSATLHIGATRKVLVGEALQISQQAIATLSYDTRLISDAAAEAFLADLAKA HHCCCCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LA HC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA