Definition Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome.
Accession NC_009972
Length 6,346,587

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The map label for this gene is yieF [H]

Identifier: 159899204

GI number: 159899204

Start: 3442949

End: 3443512

Strand: Direct

Name: yieF [H]

Synonym: Haur_2685

Alternate gene names: 159899204

Gene position: 3442949-3443512 (Clockwise)

Preceding gene: 159899203

Following gene: 159899205

Centisome position: 54.25

GC content: 50.18

Gene sequence:

>564_bases
ATGGCAGACACACTCAAGATTGTTGGGATTTCGGGCAGCTTGCGCAAGGATTCGTATAACACGGCGTTATTGTGGGCTGC
GGCTGGGTTAATGCCCGATGGCGTGGAGTTCAACATTATCCTATTGCATGATATTCCGTTATTCAATGAGGATGTTGAGC
AACACGGCTTCCCAAGCAGCGTGCAACATCTACGCCAAGCAATTAGTGAAGCCGATGCTGTACTGATTGCCACGCCTGAG
TACAACTACTCAATTCCTGGCGTGCTGAAAAATGCGCTCGATTGGGCTTCGCGGCCTGGTAGCGCTGGCGAGATGCCACT
GAGCGGCAAGCCCTTGGGAATTATTGGCGCAAGCGTCGGAGCCTATGGCACTGCTCGCGGTCAGCACCATTTACGCCAAG
TGACCGTCAATACCAACATGCATCCCTTAAATAAACCTGAGGTGATGATTACCTTCGCAGACAAAAAGTTTAGCGATGGT
CAATTACACGATGAACCAACCCGCAAGGTTGTACGTAACCATTTAGAAGCGCTTGTGGCTTGGACGAAACGGTTAAGTCA
ATAA

Upstream 100 bases:

>100_bases
AGGACAAAAAGATGGACAACATGGCGGACAACACGATCGTATTATCGCGATACAATCAGTGTGTGATCATCAACAACCAT
TTGTTGGAGGAAGTTCGTCT

Downstream 100 bases:

>100_bases
ATAGTTAACTTAGGGCAACCGGGTCGTCGCATGTTCACACAAAGGAGTGTTGATTATGTCGATTTTGGGCTTACATCATA
TTACAATTGTTAGTGCAGAC

Product: NAD(P)H dehydrogenase (quinone)

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 187; Mature: 186

Protein sequence:

>187_residues
MADTLKIVGISGSLRKDSYNTALLWAAAGLMPDGVEFNIILLHDIPLFNEDVEQHGFPSSVQHLRQAISEADAVLIATPE
YNYSIPGVLKNALDWASRPGSAGEMPLSGKPLGIIGASVGAYGTARGQHHLRQVTVNTNMHPLNKPEVMITFADKKFSDG
QLHDEPTRKVVRNHLEALVAWTKRLSQ

Sequences:

>Translated_187_residues
MADTLKIVGISGSLRKDSYNTALLWAAAGLMPDGVEFNIILLHDIPLFNEDVEQHGFPSSVQHLRQAISEADAVLIATPE
YNYSIPGVLKNALDWASRPGSAGEMPLSGKPLGIIGASVGAYGTARGQHHLRQVTVNTNMHPLNKPEVMITFADKKFSDG
QLHDEPTRKVVRNHLEALVAWTKRLSQ
>Mature_186_residues
ADTLKIVGISGSLRKDSYNTALLWAAAGLMPDGVEFNIILLHDIPLFNEDVEQHGFPSSVQHLRQAISEADAVLIATPEY
NYSIPGVLKNALDWASRPGSAGEMPLSGKPLGIIGASVGAYGTARGQHHLRQVTVNTNMHPLNKPEVMITFADKKFSDGQ
LHDEPTRKVVRNHLEALVAWTKRLSQ

Specific function: Unknown

COG id: COG0431

COG function: function code R; Predicted flavoprotein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ssuE family [H]

Homologues:

Organism=Escherichia coli, GI1790149, Length=189, Percent_Identity=40.2116402116402, Blast_Score=134, Evalue=5e-33,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005025 [H]

Pfam domain/function: PF03358 FMN_red [H]

EC number: NA

Molecular weight: Translated: 20401; Mature: 20269

Theoretical pI: Translated: 6.97; Mature: 6.97

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MADTLKIVGISGSLRKDSYNTALLWAAAGLMPDGVEFNIILLHDIPLFNEDVEQHGFPSS
CCCCEEEEECCCCCCCCCCCCEEEEEHHCCCCCCCEEEEEEEECCCCCCCCHHHCCCCHH
VQHLRQAISEADAVLIATPEYNYSIPGVLKNALDWASRPGSAGEMPLSGKPLGIIGASVG
HHHHHHHHHHCCEEEEECCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEECCCC
AYGTARGQHHLRQVTVNTNMHPLNKPEVMITFADKKFSDGQLHDEPTRKVVRNHLEALVA
CCCCCCCCCEEEEEEECCCCCCCCCCCEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHH
WTKRLSQ
HHHHHCC
>Mature Secondary Structure 
ADTLKIVGISGSLRKDSYNTALLWAAAGLMPDGVEFNIILLHDIPLFNEDVEQHGFPSS
CCCEEEEECCCCCCCCCCCCEEEEEHHCCCCCCCEEEEEEEECCCCCCCCHHHCCCCHH
VQHLRQAISEADAVLIATPEYNYSIPGVLKNALDWASRPGSAGEMPLSGKPLGIIGASVG
HHHHHHHHHHCCEEEEECCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEECCCC
AYGTARGQHHLRQVTVNTNMHPLNKPEVMITFADKKFSDGQLHDEPTRKVVRNHLEALVA
CCCCCCCCCEEEEEEECCCCCCCCCCCEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHH
WTKRLSQ
HHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]