Definition Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome.
Accession NC_009972
Length 6,346,587

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The map label for this gene is 159899162

Identifier: 159899162

GI number: 159899162

Start: 3391059

End: 3391733

Strand: Direct

Name: 159899162

Synonym: Haur_2643

Alternate gene names: NA

Gene position: 3391059-3391733 (Clockwise)

Preceding gene: 159899161

Following gene: 159899163

Centisome position: 53.43

GC content: 45.33

Gene sequence:

>675_bases
ATGGATAGTTTTGAGCCATTACGCGCAGCTGGCTTGGATGTAACATTCCATGTATGGGACGAGGAAGAAGTCGCAACCGC
AATCCGCTATGCTCAACAACGTCGAAGCCAAGGACTTCCATCTCAAGTACCCTATTTTTGGTATGCCAACGTATCCAAGC
CCGCCGATCACCCAACCTATAATCTGTCGCAGGATGTTACACAGGAAAAAACACCAAGGCCACTAGATAGTCTTGTATCA
AGCATTGCATTGCAGATTGAAAACCGCCAAGCCTGCTATTGGAAAATCTGGGATTACATTCCAGGCCCAGTTCATCACGA
ATTTTTCTGTCATTACGAATCACTTGATATGCTGATACCCAATCTTATCAACTATTATTGTGGAGAGTCTACAATAATTA
ATGATTGGGTTGTTCCATTAAATCGGCATCCTGAATTGAACCCTAGGCGAGTAGCGACGATTATTGTCCACGCAAGGCCT
ACCACACTCACCAAGCTTGAGAAGCATCAAACCAACCAATCTCACCGAGACCAGATGCAATGGAATCGTGAACGTTGCAC
ACGCCATGCCTTCCTACGCCAATACCTCATCATCAAGCATAATAGTGATCCGACGAGCCAACTTTATCTGCGACGTGATT
GCCGAGCTGCTTGGATCATTCCTCAATCTGATTAA

Upstream 100 bases:

>100_bases
CTGGGATTTAGTCTGCGATTTACATCAAGCTGAAGTGTATGCCAATAATGCGCTGTGCTACAAAAATGGTGAGTTTATTA
TTTAACATAGAAAGCACCAT

Downstream 100 bases:

>100_bases
GAGCTAAAACAGAATCGAGTTCAATTCTAGGACTATATGTTATGTCAAAAATTACGAATCACTATACACGTAATGTGGGG
ATGCAAGTTCAAGAGCGGAT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 224; Mature: 224

Protein sequence:

>224_residues
MDSFEPLRAAGLDVTFHVWDEEEVATAIRYAQQRRSQGLPSQVPYFWYANVSKPADHPTYNLSQDVTQEKTPRPLDSLVS
SIALQIENRQACYWKIWDYIPGPVHHEFFCHYESLDMLIPNLINYYCGESTIINDWVVPLNRHPELNPRRVATIIVHARP
TTLTKLEKHQTNQSHRDQMQWNRERCTRHAFLRQYLIIKHNSDPTSQLYLRRDCRAAWIIPQSD

Sequences:

>Translated_224_residues
MDSFEPLRAAGLDVTFHVWDEEEVATAIRYAQQRRSQGLPSQVPYFWYANVSKPADHPTYNLSQDVTQEKTPRPLDSLVS
SIALQIENRQACYWKIWDYIPGPVHHEFFCHYESLDMLIPNLINYYCGESTIINDWVVPLNRHPELNPRRVATIIVHARP
TTLTKLEKHQTNQSHRDQMQWNRERCTRHAFLRQYLIIKHNSDPTSQLYLRRDCRAAWIIPQSD
>Mature_224_residues
MDSFEPLRAAGLDVTFHVWDEEEVATAIRYAQQRRSQGLPSQVPYFWYANVSKPADHPTYNLSQDVTQEKTPRPLDSLVS
SIALQIENRQACYWKIWDYIPGPVHHEFFCHYESLDMLIPNLINYYCGESTIINDWVVPLNRHPELNPRRVATIIVHARP
TTLTKLEKHQTNQSHRDQMQWNRERCTRHAFLRQYLIIKHNSDPTSQLYLRRDCRAAWIIPQSD

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 26455; Mature: 26455

Theoretical pI: Translated: 7.34; Mature: 7.34

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.2 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
2.2 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDSFEPLRAAGLDVTFHVWDEEEVATAIRYAQQRRSQGLPSQVPYFWYANVSKPADHPTY
CCCCCCHHHCCCEEEEEECCHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCCCCCC
NLSQDVTQEKTPRPLDSLVSSIALQIENRQACYWKIWDYIPGPVHHEFFCHYESLDMLIP
CCCHHHHHCCCCCCHHHHHHHHHHHCCCCCEEEEEEECCCCCCCCHHHEEEHHHHHHHHH
NLINYYCGESTIINDWVVPLNRHPELNPRRVATIIVHARPTTLTKLEKHQTNQSHRDQMQ
HHHHHHCCCCEEECCEEECCCCCCCCCCCEEEEEEEECCCCHHHHHHHHHCCHHHHHHHH
WNRERCTRHAFLRQYLIIKHNSDPTSQLYLRRDCRAAWIIPQSD
HHHHHHHHHHHHHHHEEEEECCCCHHHHHHHHCCCEEEEEECCC
>Mature Secondary Structure
MDSFEPLRAAGLDVTFHVWDEEEVATAIRYAQQRRSQGLPSQVPYFWYANVSKPADHPTY
CCCCCCHHHCCCEEEEEECCHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCCCCCC
NLSQDVTQEKTPRPLDSLVSSIALQIENRQACYWKIWDYIPGPVHHEFFCHYESLDMLIP
CCCHHHHHCCCCCCHHHHHHHHHHHCCCCCEEEEEEECCCCCCCCHHHEEEHHHHHHHHH
NLINYYCGESTIINDWVVPLNRHPELNPRRVATIIVHARPTTLTKLEKHQTNQSHRDQMQ
HHHHHHCCCCEEECCEEECCCCCCCCCCCEEEEEEEECCCCHHHHHHHHHCCHHHHHHHH
WNRERCTRHAFLRQYLIIKHNSDPTSQLYLRRDCRAAWIIPQSD
HHHHHHHHHHHHHHHEEEEECCCCHHHHHHHHCCCEEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA