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The map label for this gene is ycnJ [H]

Identifier: 159899155

GI number: 159899155

Start: 3383310

End: 3383831

Strand: Reverse

Name: ycnJ [H]

Synonym: Haur_2636

Alternate gene names: 159899155

Gene position: 3383831-3383310 (Counterclockwise)

Preceding gene: 159899156

Following gene: 159899154

Centisome position: 53.32

GC content: 52.49

Gene sequence:

>522_bases
ATGAAACGTTTAATTGCATTATTAGCATTGGTAATTATTTTTGCTCAGCCAAGCGTTGGTTCAGCACACTCAAAATTGGC
TAGTTCAACCCCCGCCGATGGCTCGAAGTTGGCAGCCGCGCCAAGCGAAGTTGTGCTGACCTTCAACGACGAATTGGAAT
CCGAAGGCTTGAAATTAAGCGTTACCGATGCCAATGGCGCTGTGGTTGATACCGGTGATGGTCGGGTTGATTTGGCTGAT
CTTGAGCGCAAAACTATGCGCGTTTCGTTGAAATCGGGCTTGGGGACGGGCAGCTACACCGTTCGTTGGTCGGTGGTTGG
CAGCGATGGTCACGAAGTAACTGGTTCAATTGGCTTTGCTGTGGGCGATGCGGCTGTGCCAACCCCCGCCGAGCCAGATC
ATCACAGCCCAGGCTTGCCAGCAACTGGTAGCAATGGCTTCAATCTTGGCATGCTGGTGGCTGCAATCATTATCTTTATG
ATTGCTGGCGTGGCTTTGCGCCGCCGCTCAGTTCGTGCCTAA

Upstream 100 bases:

>100_bases
GCCACGTTACCTTGGTTGTAATGCTTAATCTCATTCGTTTGATCGGTTTTGGCATTCTTTGGCAGATCGTTGTGATCTGC
TGCAATCAAGGATTTACAGA

Downstream 100 bases:

>100_bases
GCCTGTAGTTTGAGTGATTAAGCGTGCTAGGTTGCGGCCTAGCACGCTTTTTTTGCTATAGAGGAATGGGGATCGGTTGT
TGGGGGTGTGGGATCGGCGA

Product: cell wall anchor domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 173; Mature: 173

Protein sequence:

>173_residues
MKRLIALLALVIIFAQPSVGSAHSKLASSTPADGSKLAAAPSEVVLTFNDELESEGLKLSVTDANGAVVDTGDGRVDLAD
LERKTMRVSLKSGLGTGSYTVRWSVVGSDGHEVTGSIGFAVGDAAVPTPAEPDHHSPGLPATGSNGFNLGMLVAAIIIFM
IAGVALRRRSVRA

Sequences:

>Translated_173_residues
MKRLIALLALVIIFAQPSVGSAHSKLASSTPADGSKLAAAPSEVVLTFNDELESEGLKLSVTDANGAVVDTGDGRVDLAD
LERKTMRVSLKSGLGTGSYTVRWSVVGSDGHEVTGSIGFAVGDAAVPTPAEPDHHSPGLPATGSNGFNLGMLVAAIIIFM
IAGVALRRRSVRA
>Mature_173_residues
MKRLIALLALVIIFAQPSVGSAHSKLASSTPADGSKLAAAPSEVVLTFNDELESEGLKLSVTDANGAVVDTGDGRVDLAD
LERKTMRVSLKSGLGTGSYTVRWSVVGSDGHEVTGSIGFAVGDAAVPTPAEPDHHSPGLPATGSNGFNLGMLVAAIIIFM
IAGVALRRRSVRA

Specific function: Involved in uptake of extracellular oxidized copper under copper-limiting conditions [H]

COG id: COG2372

COG function: function code R; Uncharacterized protein, homolog of Cu resistance protein CopC

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: In the C-terminal section; belongs to the CopD family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007348
- InterPro:   IPR008457
- InterPro:   IPR014755
- InterPro:   IPR014756 [H]

Pfam domain/function: PF04234 CopC; PF05425 CopD [H]

EC number: NA

Molecular weight: Translated: 17720; Mature: 17720

Theoretical pI: Translated: 6.52; Mature: 6.52

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKRLIALLALVIIFAQPSVGSAHSKLASSTPADGSKLAAAPSEVVLTFNDELESEGLKLS
CHHHHHHHHHHHHHCCCCCCCHHHHHHCCCCCCCCEEECCCCEEEEEECCCCCCCCCEEE
VTDANGAVVDTGDGRVDLADLERKTMRVSLKSGLGTGSYTVRWSVVGSDGHEVTGSIGFA
EECCCCCEEECCCCEEEHHHHHHHHHEEECCCCCCCCCEEEEEEEECCCCCEEECEEEEE
VGDAAVPTPAEPDHHSPGLPATGSNGFNLGMLVAAIIIFMIAGVALRRRSVRA
ECCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MKRLIALLALVIIFAQPSVGSAHSKLASSTPADGSKLAAAPSEVVLTFNDELESEGLKLS
CHHHHHHHHHHHHHCCCCCCCHHHHHHCCCCCCCCEEECCCCEEEEEECCCCCCCCCEEE
VTDANGAVVDTGDGRVDLADLERKTMRVSLKSGLGTGSYTVRWSVVGSDGHEVTGSIGFA
EECCCCCEEECCCCEEEHHHHHHHHHEEECCCCCCCCCEEEEEEEECCCCCEEECEEEEE
VGDAAVPTPAEPDHHSPGLPATGSNGFNLGMLVAAIIIFMIAGVALRRRSVRA
ECCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: Cu [C]

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8969502; 9384377 [H]