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The map label for this gene is ycnJ [H]

Identifier: 159899154

GI number: 159899154

Start: 3381314

End: 3383029

Strand: Reverse

Name: ycnJ [H]

Synonym: Haur_2635

Alternate gene names: 159899154

Gene position: 3383029-3381314 (Counterclockwise)

Preceding gene: 159899155

Following gene: 159899153

Centisome position: 53.3

GC content: 53.21

Gene sequence:

>1716_bases
ATGAAGCGGATTTTAATTGTAGCTCTATTTGTGCTGTGTTTATGGCCAAGTGTGGCGGCGGCTCATGCCTTGGTTATCGA
GAGCAGCATTGTTGATGGGGCGGTGCTCGATGTCGCACCTGCCGAGGTTGTGTTGCGATTTAGCGAGCCGCTTGATCGTA
GTTATAGCTCGTTGACGCTCTACAATGAGCAATCGCAGCCAATTGGCCTACCGCAAACCCAGTTTCCTGCTGCCGATAGT
ATGCAAGTGGCCTTGCCTGCCGAGCTTCGGCCTGGCGAATATACCTTGATTTACAAAGTGCTTTCGACCGCCGATGGCCA
TCGTTCGGCTGGCTCGTTGCTGTTTAGCATTGGCACTGGGGTTGCTCCCACCGCGCCCTCGGTCGAAGTTAGTGCAACCG
CCAATGCTGGCTTGAATTGGGGCGTGGTCAGCGGGCGTTCAATCGCCTTAACTGGCGGCTTAGGGGCGATTGGCGGCTTG
GCGTGGTTGTTGATTTTATTATTGCCAGCAATTCAACATAATCCTGAATCACGTTTGCCGTTGCTGGTTCGCCCAACGAT
TTGGCTGACCCAGCTGAGTTTGGTTTGGCTGTTGATTGGCTCGGTTTGGGAATTTGTGGTGCGGGCCAGCGATTTTGGTG
ATGGTAGTTTAGCCTCAATTCAATATGCCGATGTGCTTTCTTCGATGGCGATTAGCCGTTGGGGCGTGTTGGCCTTGATT
CGCTTGGTCGCGATCACACTGTTAATTCCGCTGACGTTCTTGGCTGCTTACCAAAAACCAATGGGCTATGTTGCCTTGGC
TTTGGCAAGTTTAAGCCTATTGACCTTTAGTATGAGCGGCCATGCAGCGGCTAACATCGACGATCCAATCACGCCGGTGG
CCTCAGATTGGATGCATATGCTGACGGCGGCGGTTTGGTTTGGTGGCTTGATTGGTATGGCTTTGAGTGCTTGGGTACTC
CGTAAAACCGAGGCGGCGCTACGTAACAGCGCTTTGGCTTGGCTGATTGCCCGATTTAGCCCGTTGGCCTTGTTTAGCAT
TGCGATGGTTGTGTTGACTGGTACGATGCGTACCTTTGACCAATTGCCAACCTTGGCAGGCTTGTGGGAATCGCGCTACG
GCCAGACCTTGTTGATCAAGTTGGCGGTGATGCTGGCAGCTTTGTTGCTCGGCTCTTGGCATTGGCGTAAGCTTAATCCC
CGTTTGCAAGCTGCCAAAGATCAAACAACTGTGGTAAAAATTGGCCTGACCTTGGGCTTGGAAAGTGCTTTGGCGATTGG
GGTGATTCTGGTTGCTAGCGCTTTGACTCAAACGCCACATCCAGTCAAAGCCGCTCCCAGCGCTGGTGGCACTGCCCGAC
CAACCTTGCCAACGCCAACCCCACGGGTCGCCCAGCCGCTCTATCTAACAGCGCAGCGCGAAGATTTAACCATGACCCTC
GATACTGATGATAATCGGCCTGGTGAACGCCAATTTAGCGCAACCGTCCGCGATGCGAATGGCGTAATTCGCCCAGATCG
AGTACGCTTACGCTTTGAATCGCTTGATCTCGAAGCTGGCCAACAAGTGGCAATTCTTGAACCTGCTACTGATGGACGTT
TTACCGCGACCTCAGGAGCGCTAAGCTTGGTTGGGCGCTGGAAGATCGAAATGCAGGTGCGTCGTTTGAATTTGCCCGAC
GTAACTGCTGAATGGACTGTGGAGATAACGCGCTAA

Upstream 100 bases:

>100_bases
AAGCGTGGAACGCCCCTCGCCCGCCGCAGTGGGAGAGGGATCGGGGGTGAGGGATCGTAAATCCTAGCCCGACCCCTACT
AGATTTAAGGAACAATAGCT

Downstream 100 bases:

>100_bases
TGCTACGTTTTGCTGTGCCTTCCAAAGGTGCTCTTGCTGATGATACGTTTCGCTTTTTTGAAAGCTGTGGCCTGAAAGTC
TCGCGACCCAATCCGCGCCG

Product: copper resistance protein CopC

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 571; Mature: 571

Protein sequence:

>571_residues
MKRILIVALFVLCLWPSVAAAHALVIESSIVDGAVLDVAPAEVVLRFSEPLDRSYSSLTLYNEQSQPIGLPQTQFPAADS
MQVALPAELRPGEYTLIYKVLSTADGHRSAGSLLFSIGTGVAPTAPSVEVSATANAGLNWGVVSGRSIALTGGLGAIGGL
AWLLILLLPAIQHNPESRLPLLVRPTIWLTQLSLVWLLIGSVWEFVVRASDFGDGSLASIQYADVLSSMAISRWGVLALI
RLVAITLLIPLTFLAAYQKPMGYVALALASLSLLTFSMSGHAAANIDDPITPVASDWMHMLTAAVWFGGLIGMALSAWVL
RKTEAALRNSALAWLIARFSPLALFSIAMVVLTGTMRTFDQLPTLAGLWESRYGQTLLIKLAVMLAALLLGSWHWRKLNP
RLQAAKDQTTVVKIGLTLGLESALAIGVILVASALTQTPHPVKAAPSAGGTARPTLPTPTPRVAQPLYLTAQREDLTMTL
DTDDNRPGERQFSATVRDANGVIRPDRVRLRFESLDLEAGQQVAILEPATDGRFTATSGALSLVGRWKIEMQVRRLNLPD
VTAEWTVEITR

Sequences:

>Translated_571_residues
MKRILIVALFVLCLWPSVAAAHALVIESSIVDGAVLDVAPAEVVLRFSEPLDRSYSSLTLYNEQSQPIGLPQTQFPAADS
MQVALPAELRPGEYTLIYKVLSTADGHRSAGSLLFSIGTGVAPTAPSVEVSATANAGLNWGVVSGRSIALTGGLGAIGGL
AWLLILLLPAIQHNPESRLPLLVRPTIWLTQLSLVWLLIGSVWEFVVRASDFGDGSLASIQYADVLSSMAISRWGVLALI
RLVAITLLIPLTFLAAYQKPMGYVALALASLSLLTFSMSGHAAANIDDPITPVASDWMHMLTAAVWFGGLIGMALSAWVL
RKTEAALRNSALAWLIARFSPLALFSIAMVVLTGTMRTFDQLPTLAGLWESRYGQTLLIKLAVMLAALLLGSWHWRKLNP
RLQAAKDQTTVVKIGLTLGLESALAIGVILVASALTQTPHPVKAAPSAGGTARPTLPTPTPRVAQPLYLTAQREDLTMTL
DTDDNRPGERQFSATVRDANGVIRPDRVRLRFESLDLEAGQQVAILEPATDGRFTATSGALSLVGRWKIEMQVRRLNLPD
VTAEWTVEITR
>Mature_571_residues
MKRILIVALFVLCLWPSVAAAHALVIESSIVDGAVLDVAPAEVVLRFSEPLDRSYSSLTLYNEQSQPIGLPQTQFPAADS
MQVALPAELRPGEYTLIYKVLSTADGHRSAGSLLFSIGTGVAPTAPSVEVSATANAGLNWGVVSGRSIALTGGLGAIGGL
AWLLILLLPAIQHNPESRLPLLVRPTIWLTQLSLVWLLIGSVWEFVVRASDFGDGSLASIQYADVLSSMAISRWGVLALI
RLVAITLLIPLTFLAAYQKPMGYVALALASLSLLTFSMSGHAAANIDDPITPVASDWMHMLTAAVWFGGLIGMALSAWVL
RKTEAALRNSALAWLIARFSPLALFSIAMVVLTGTMRTFDQLPTLAGLWESRYGQTLLIKLAVMLAALLLGSWHWRKLNP
RLQAAKDQTTVVKIGLTLGLESALAIGVILVASALTQTPHPVKAAPSAGGTARPTLPTPTPRVAQPLYLTAQREDLTMTL
DTDDNRPGERQFSATVRDANGVIRPDRVRLRFESLDLEAGQQVAILEPATDGRFTATSGALSLVGRWKIEMQVRRLNLPD
VTAEWTVEITR

Specific function: Involved in uptake of extracellular oxidized copper under copper-limiting conditions [H]

COG id: COG1276

COG function: function code P; Putative copper export protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: In the C-terminal section; belongs to the CopD family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007348
- InterPro:   IPR008457
- InterPro:   IPR014755
- InterPro:   IPR014756 [H]

Pfam domain/function: PF04234 CopC; PF05425 CopD [H]

EC number: NA

Molecular weight: Translated: 61332; Mature: 61332

Theoretical pI: Translated: 8.43; Mature: 8.43

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKRILIVALFVLCLWPSVAAAHALVIESSIVDGAVLDVAPAEVVLRFSEPLDRSYSSLTL
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHEECCHHHHHEECCCCCCCCCCEEEE
YNEQSQPIGLPQTQFPAADSMQVALPAELRPGEYTLIYKVLSTADGHRSAGSLLFSIGTG
ECCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCEEEEEEEHHCCCCCCCCCCEEEEECCC
VAPTAPSVEVSATANAGLNWGVVSGRSIALTGGLGAIGGLAWLLILLLPAIQHNPESRLP
CCCCCCCEEEEECCCCCCCEEEECCCEEEEECCCHHHHHHHHHHHHHHHHHCCCCCCCCC
LLVRPTIWLTQLSLVWLLIGSVWEFVVRASDFGDGSLASIQYADVLSSMAISRWGVLALI
EEEECHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH
RLVAITLLIPLTFLAAYQKPMGYVALALASLSLLTFSMSGHAAANIDDPITPVASDWMHM
HHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHEEECCCCEECCCCCCCCHHHHHHHHH
LTAAVWFGGLIGMALSAWVLRKTEAALRNSALAWLIARFSPLALFSIAMVVLTGTMRTFD
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHH
QLPTLAGLWESRYGQTLLIKLAVMLAALLLGSWHWRKLNPRLQAAKDQTTVVKIGLTLGL
HCCHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCEECCCHHHCCCCCCEEEEEEEHHCH
ESALAIGVILVASALTQTPHPVKAAPSAGGTARPTLPTPTPRVAQPLYLTAQREDLTMTL
HHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCEEEEE
DTDDNRPGERQFSATVRDANGVIRPDRVRLRFESLDLEAGQQVAILEPATDGRFTATSGA
ECCCCCCCCHHHHEEEECCCCCCCCCCEEEEEEECCCCCCCEEEEEECCCCCCEEECCCH
LSLVGRWKIEMQVRRLNLPDVTAEWTVEITR
HHEEEEEEEEEEEEECCCCCCCCEEEEEEEC
>Mature Secondary Structure
MKRILIVALFVLCLWPSVAAAHALVIESSIVDGAVLDVAPAEVVLRFSEPLDRSYSSLTL
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHEECCHHHHHEECCCCCCCCCCEEEE
YNEQSQPIGLPQTQFPAADSMQVALPAELRPGEYTLIYKVLSTADGHRSAGSLLFSIGTG
ECCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCEEEEEEEHHCCCCCCCCCCEEEEECCC
VAPTAPSVEVSATANAGLNWGVVSGRSIALTGGLGAIGGLAWLLILLLPAIQHNPESRLP
CCCCCCCEEEEECCCCCCCEEEECCCEEEEECCCHHHHHHHHHHHHHHHHHCCCCCCCCC
LLVRPTIWLTQLSLVWLLIGSVWEFVVRASDFGDGSLASIQYADVLSSMAISRWGVLALI
EEEECHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH
RLVAITLLIPLTFLAAYQKPMGYVALALASLSLLTFSMSGHAAANIDDPITPVASDWMHM
HHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHEEECCCCEECCCCCCCCHHHHHHHHH
LTAAVWFGGLIGMALSAWVLRKTEAALRNSALAWLIARFSPLALFSIAMVVLTGTMRTFD
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHH
QLPTLAGLWESRYGQTLLIKLAVMLAALLLGSWHWRKLNPRLQAAKDQTTVVKIGLTLGL
HCCHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCEECCCHHHCCCCCCEEEEEEEHHCH
ESALAIGVILVASALTQTPHPVKAAPSAGGTARPTLPTPTPRVAQPLYLTAQREDLTMTL
HHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCEEEEE
DTDDNRPGERQFSATVRDANGVIRPDRVRLRFESLDLEAGQQVAILEPATDGRFTATSGA
ECCCCCCCCHHHHEEEECCCCCCCCCCEEEEEEECCCCCCCEEEEEECCCCCCEEECCCH
LSLVGRWKIEMQVRRLNLPDVTAEWTVEITR
HHEEEEEEEEEEEEECCCCCCCCEEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: Cu [C]

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8969502; 9384377 [H]