Definition Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome.
Accession NC_009972
Length 6,346,587

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The map label for this gene is 159899143

Identifier: 159899143

GI number: 159899143

Start: 3366360

End: 3367499

Strand: Direct

Name: 159899143

Synonym: Haur_2624

Alternate gene names: NA

Gene position: 3366360-3367499 (Clockwise)

Preceding gene: 159899142

Following gene: 159899144

Centisome position: 53.04

GC content: 45.61

Gene sequence:

>1140_bases
ATGCAAATCGCCGCATTATTGGCCGAGGCTCGCCAAGCCTTGAGTGTAGGAGATCGTGCCAAAGCCAAACAGTTCGCTTC
ACAAGCCTTGCGACTTGATAGCAAGCACATTGAAACATGGCTTTTACTGGCCGATTTGGTTGAAGTTCCCGCGCAAAAAC
GCGATTGTTTTCAACGAATTTTGGCCATCGATCCTACCAATGCACAAGCCAAACAAGCCCTGAACCAACTTGATGCACCA
GCCCCAGTTGCTGCCGCCAGCTTTGAATTACCCAAATCGGCGTGGTTTGGCAGCAAATCAGCTGAGCCAGAACTAACCGC
CCAAGTTGGTGGGCCGATCGCAACAGCACCATTAGCAACCAACGCACCGAGTGGCATTCGACCACTCGGTTCGAGCCAAG
CTGCCTCATTAGTTGAATTGAGCAATACGGCTGTGGGTGGCACCACCCCAACTGGCTATGTTCAGCCAATTCAGCCTAGC
TATAACCAAACAAATTATCCACAACCCAACCAAGCCTATAGTTTGCCAGCAGCAAGTTATGGCCAAGCCCAGCCACAATA
TGGTCAAGTGACCTACCCATATGTTGAGCCAAGTGGCGCAGCCAAATTCTTGAAATGGCTAGTTTTTGCAACATTAGGCT
TAATAGTAGTTTGTGCAGGGATTGGCTTGATGGTCAATTTTGGCAAAGAGCCACCGCCAACGCCCAAAGTCAGTGCCCAA
GATCGCACGACAGCGATGCTTGGTGATACCATGAAGATAATCGTTAATCCCGATTTTTATGATAAAAGCAAACAGAAAGC
CATTGTTGAGCCTTATTTGAATAACTATTTTATTGAGGCTGCCCGTACTAATACTGGACGGTTAGACCAAACTGTTCTTG
ATAGCTTCGATAATGGAGTAGATCAACAGGCCTTTCTGGCGGCTCTACCTTATATCAAAGATGCCTATGTTACGCCAACC
CAGTATACGGTAGAATCACAAACGAATGAGATGATTACACTCAAGTTAATCAGTGGAGATCTTGTATTTACTTTTCATAA
TGGTAAATTTCTCCAAGTTCCATTAAAAGATACCTACGATACATTTACCTGGGTCAATGATGATGGAAGATGGTATCTTG
CTGGGATAAGTTTAAAATAA

Upstream 100 bases:

>100_bases
GCTAGGCATAAATTCAATCAAAAGTCGCTTCATTAATCAAACCTAGAATGCTATACTAGGAAAATACTGACTAAAGTACC
AAACCAATGAGGGAAGAACA

Downstream 100 bases:

>100_bases
GTTAGTCAGAGGCATTATCTATTCTCAATATTGATATAGAATAGCATTAAACTGTTACTCCGCCCCAATGCTGTGGCTGG
TATACTTAAGCGAGAGAGTC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 379; Mature: 379

Protein sequence:

>379_residues
MQIAALLAEARQALSVGDRAKAKQFASQALRLDSKHIETWLLLADLVEVPAQKRDCFQRILAIDPTNAQAKQALNQLDAP
APVAAASFELPKSAWFGSKSAEPELTAQVGGPIATAPLATNAPSGIRPLGSSQAASLVELSNTAVGGTTPTGYVQPIQPS
YNQTNYPQPNQAYSLPAASYGQAQPQYGQVTYPYVEPSGAAKFLKWLVFATLGLIVVCAGIGLMVNFGKEPPPTPKVSAQ
DRTTAMLGDTMKIIVNPDFYDKSKQKAIVEPYLNNYFIEAARTNTGRLDQTVLDSFDNGVDQQAFLAALPYIKDAYVTPT
QYTVESQTNEMITLKLISGDLVFTFHNGKFLQVPLKDTYDTFTWVNDDGRWYLAGISLK

Sequences:

>Translated_379_residues
MQIAALLAEARQALSVGDRAKAKQFASQALRLDSKHIETWLLLADLVEVPAQKRDCFQRILAIDPTNAQAKQALNQLDAP
APVAAASFELPKSAWFGSKSAEPELTAQVGGPIATAPLATNAPSGIRPLGSSQAASLVELSNTAVGGTTPTGYVQPIQPS
YNQTNYPQPNQAYSLPAASYGQAQPQYGQVTYPYVEPSGAAKFLKWLVFATLGLIVVCAGIGLMVNFGKEPPPTPKVSAQ
DRTTAMLGDTMKIIVNPDFYDKSKQKAIVEPYLNNYFIEAARTNTGRLDQTVLDSFDNGVDQQAFLAALPYIKDAYVTPT
QYTVESQTNEMITLKLISGDLVFTFHNGKFLQVPLKDTYDTFTWVNDDGRWYLAGISLK
>Mature_379_residues
MQIAALLAEARQALSVGDRAKAKQFASQALRLDSKHIETWLLLADLVEVPAQKRDCFQRILAIDPTNAQAKQALNQLDAP
APVAAASFELPKSAWFGSKSAEPELTAQVGGPIATAPLATNAPSGIRPLGSSQAASLVELSNTAVGGTTPTGYVQPIQPS
YNQTNYPQPNQAYSLPAASYGQAQPQYGQVTYPYVEPSGAAKFLKWLVFATLGLIVVCAGIGLMVNFGKEPPPTPKVSAQ
DRTTAMLGDTMKIIVNPDFYDKSKQKAIVEPYLNNYFIEAARTNTGRLDQTVLDSFDNGVDQQAFLAALPYIKDAYVTPT
QYTVESQTNEMITLKLISGDLVFTFHNGKFLQVPLKDTYDTFTWVNDDGRWYLAGISLK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 41103; Mature: 41103

Theoretical pI: Translated: 5.43; Mature: 5.43

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQIAALLAEARQALSVGDRAKAKQFASQALRLDSKHIETWLLLADLVEVPAQKRDCFQRI
CHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHCCCHHHHHHHHH
LAIDPTNAQAKQALNQLDAPAPVAAASFELPKSAWFGSKSAEPELTAQVGGPIATAPLAT
HHCCCCCHHHHHHHHHCCCCCCCCHHCCCCCHHHCCCCCCCCCCEEHHCCCCEEECCCCC
NAPSGIRPLGSSQAASLVELSNTAVGGTTPTGYVQPIQPSYNQTNYPQPNQAYSLPAASY
CCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCCEECCCCCC
GQAQPQYGQVTYPYVEPSGAAKFLKWLVFATLGLIVVCAGIGLMVNFGKEPPPTPKVSAQ
CCCCCCCCCEEECEECCCCHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCCCCCCCCC
DRTTAMLGDTMKIIVNPDFYDKSKQKAIVEPYLNNYFIEAARTNTGRLDQTVLDSFDNGV
CCHHHHHCCCEEEEECCCCCCCCCCHHHHHHHHCCEEEEEECCCCCCHHHHHHHHHCCCC
DQQAFLAALPYIKDAYVTPTQYTVESQTNEMITLKLISGDLVFTFHNGKFLQVPLKDTYD
CHHHHHHHHCHHHCCEECCCEEEEECCCCCEEEEEEECCCEEEEEECCEEEEEECCCCCC
TFTWVNDDGRWYLAGISLK
CEEEECCCCCEEEEEEECC
>Mature Secondary Structure
MQIAALLAEARQALSVGDRAKAKQFASQALRLDSKHIETWLLLADLVEVPAQKRDCFQRI
CHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHCCCHHHHHHHHH
LAIDPTNAQAKQALNQLDAPAPVAAASFELPKSAWFGSKSAEPELTAQVGGPIATAPLAT
HHCCCCCHHHHHHHHHCCCCCCCCHHCCCCCHHHCCCCCCCCCCEEHHCCCCEEECCCCC
NAPSGIRPLGSSQAASLVELSNTAVGGTTPTGYVQPIQPSYNQTNYPQPNQAYSLPAASY
CCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCCEECCCCCC
GQAQPQYGQVTYPYVEPSGAAKFLKWLVFATLGLIVVCAGIGLMVNFGKEPPPTPKVSAQ
CCCCCCCCCEEECEECCCCHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCCCCCCCCC
DRTTAMLGDTMKIIVNPDFYDKSKQKAIVEPYLNNYFIEAARTNTGRLDQTVLDSFDNGV
CCHHHHHCCCEEEEECCCCCCCCCCHHHHHHHHCCEEEEEECCCCCCHHHHHHHHHCCCC
DQQAFLAALPYIKDAYVTPTQYTVESQTNEMITLKLISGDLVFTFHNGKFLQVPLKDTYD
CHHHHHHHHCHHHCCEECCCEEEEECCCCCEEEEEEECCCEEEEEECCEEEEEECCCCCC
TFTWVNDDGRWYLAGISLK
CEEEECCCCCEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA