| Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
|---|---|
| Accession | NC_009972 |
| Length | 6,346,587 |
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The map label for this gene is 159899143
Identifier: 159899143
GI number: 159899143
Start: 3366360
End: 3367499
Strand: Direct
Name: 159899143
Synonym: Haur_2624
Alternate gene names: NA
Gene position: 3366360-3367499 (Clockwise)
Preceding gene: 159899142
Following gene: 159899144
Centisome position: 53.04
GC content: 45.61
Gene sequence:
>1140_bases ATGCAAATCGCCGCATTATTGGCCGAGGCTCGCCAAGCCTTGAGTGTAGGAGATCGTGCCAAAGCCAAACAGTTCGCTTC ACAAGCCTTGCGACTTGATAGCAAGCACATTGAAACATGGCTTTTACTGGCCGATTTGGTTGAAGTTCCCGCGCAAAAAC GCGATTGTTTTCAACGAATTTTGGCCATCGATCCTACCAATGCACAAGCCAAACAAGCCCTGAACCAACTTGATGCACCA GCCCCAGTTGCTGCCGCCAGCTTTGAATTACCCAAATCGGCGTGGTTTGGCAGCAAATCAGCTGAGCCAGAACTAACCGC CCAAGTTGGTGGGCCGATCGCAACAGCACCATTAGCAACCAACGCACCGAGTGGCATTCGACCACTCGGTTCGAGCCAAG CTGCCTCATTAGTTGAATTGAGCAATACGGCTGTGGGTGGCACCACCCCAACTGGCTATGTTCAGCCAATTCAGCCTAGC TATAACCAAACAAATTATCCACAACCCAACCAAGCCTATAGTTTGCCAGCAGCAAGTTATGGCCAAGCCCAGCCACAATA TGGTCAAGTGACCTACCCATATGTTGAGCCAAGTGGCGCAGCCAAATTCTTGAAATGGCTAGTTTTTGCAACATTAGGCT TAATAGTAGTTTGTGCAGGGATTGGCTTGATGGTCAATTTTGGCAAAGAGCCACCGCCAACGCCCAAAGTCAGTGCCCAA GATCGCACGACAGCGATGCTTGGTGATACCATGAAGATAATCGTTAATCCCGATTTTTATGATAAAAGCAAACAGAAAGC CATTGTTGAGCCTTATTTGAATAACTATTTTATTGAGGCTGCCCGTACTAATACTGGACGGTTAGACCAAACTGTTCTTG ATAGCTTCGATAATGGAGTAGATCAACAGGCCTTTCTGGCGGCTCTACCTTATATCAAAGATGCCTATGTTACGCCAACC CAGTATACGGTAGAATCACAAACGAATGAGATGATTACACTCAAGTTAATCAGTGGAGATCTTGTATTTACTTTTCATAA TGGTAAATTTCTCCAAGTTCCATTAAAAGATACCTACGATACATTTACCTGGGTCAATGATGATGGAAGATGGTATCTTG CTGGGATAAGTTTAAAATAA
Upstream 100 bases:
>100_bases GCTAGGCATAAATTCAATCAAAAGTCGCTTCATTAATCAAACCTAGAATGCTATACTAGGAAAATACTGACTAAAGTACC AAACCAATGAGGGAAGAACA
Downstream 100 bases:
>100_bases GTTAGTCAGAGGCATTATCTATTCTCAATATTGATATAGAATAGCATTAAACTGTTACTCCGCCCCAATGCTGTGGCTGG TATACTTAAGCGAGAGAGTC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 379; Mature: 379
Protein sequence:
>379_residues MQIAALLAEARQALSVGDRAKAKQFASQALRLDSKHIETWLLLADLVEVPAQKRDCFQRILAIDPTNAQAKQALNQLDAP APVAAASFELPKSAWFGSKSAEPELTAQVGGPIATAPLATNAPSGIRPLGSSQAASLVELSNTAVGGTTPTGYVQPIQPS YNQTNYPQPNQAYSLPAASYGQAQPQYGQVTYPYVEPSGAAKFLKWLVFATLGLIVVCAGIGLMVNFGKEPPPTPKVSAQ DRTTAMLGDTMKIIVNPDFYDKSKQKAIVEPYLNNYFIEAARTNTGRLDQTVLDSFDNGVDQQAFLAALPYIKDAYVTPT QYTVESQTNEMITLKLISGDLVFTFHNGKFLQVPLKDTYDTFTWVNDDGRWYLAGISLK
Sequences:
>Translated_379_residues MQIAALLAEARQALSVGDRAKAKQFASQALRLDSKHIETWLLLADLVEVPAQKRDCFQRILAIDPTNAQAKQALNQLDAP APVAAASFELPKSAWFGSKSAEPELTAQVGGPIATAPLATNAPSGIRPLGSSQAASLVELSNTAVGGTTPTGYVQPIQPS YNQTNYPQPNQAYSLPAASYGQAQPQYGQVTYPYVEPSGAAKFLKWLVFATLGLIVVCAGIGLMVNFGKEPPPTPKVSAQ DRTTAMLGDTMKIIVNPDFYDKSKQKAIVEPYLNNYFIEAARTNTGRLDQTVLDSFDNGVDQQAFLAALPYIKDAYVTPT QYTVESQTNEMITLKLISGDLVFTFHNGKFLQVPLKDTYDTFTWVNDDGRWYLAGISLK >Mature_379_residues MQIAALLAEARQALSVGDRAKAKQFASQALRLDSKHIETWLLLADLVEVPAQKRDCFQRILAIDPTNAQAKQALNQLDAP APVAAASFELPKSAWFGSKSAEPELTAQVGGPIATAPLATNAPSGIRPLGSSQAASLVELSNTAVGGTTPTGYVQPIQPS YNQTNYPQPNQAYSLPAASYGQAQPQYGQVTYPYVEPSGAAKFLKWLVFATLGLIVVCAGIGLMVNFGKEPPPTPKVSAQ DRTTAMLGDTMKIIVNPDFYDKSKQKAIVEPYLNNYFIEAARTNTGRLDQTVLDSFDNGVDQQAFLAALPYIKDAYVTPT QYTVESQTNEMITLKLISGDLVFTFHNGKFLQVPLKDTYDTFTWVNDDGRWYLAGISLK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 41103; Mature: 41103
Theoretical pI: Translated: 5.43; Mature: 5.43
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQIAALLAEARQALSVGDRAKAKQFASQALRLDSKHIETWLLLADLVEVPAQKRDCFQRI CHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHCCCHHHHHHHHH LAIDPTNAQAKQALNQLDAPAPVAAASFELPKSAWFGSKSAEPELTAQVGGPIATAPLAT HHCCCCCHHHHHHHHHCCCCCCCCHHCCCCCHHHCCCCCCCCCCEEHHCCCCEEECCCCC NAPSGIRPLGSSQAASLVELSNTAVGGTTPTGYVQPIQPSYNQTNYPQPNQAYSLPAASY CCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCCEECCCCCC GQAQPQYGQVTYPYVEPSGAAKFLKWLVFATLGLIVVCAGIGLMVNFGKEPPPTPKVSAQ CCCCCCCCCEEECEECCCCHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCCCCCCCCC DRTTAMLGDTMKIIVNPDFYDKSKQKAIVEPYLNNYFIEAARTNTGRLDQTVLDSFDNGV CCHHHHHCCCEEEEECCCCCCCCCCHHHHHHHHCCEEEEEECCCCCCHHHHHHHHHCCCC DQQAFLAALPYIKDAYVTPTQYTVESQTNEMITLKLISGDLVFTFHNGKFLQVPLKDTYD CHHHHHHHHCHHHCCEECCCEEEEECCCCCEEEEEEECCCEEEEEECCEEEEEECCCCCC TFTWVNDDGRWYLAGISLK CEEEECCCCCEEEEEEECC >Mature Secondary Structure MQIAALLAEARQALSVGDRAKAKQFASQALRLDSKHIETWLLLADLVEVPAQKRDCFQRI CHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHCCCHHHHHHHHH LAIDPTNAQAKQALNQLDAPAPVAAASFELPKSAWFGSKSAEPELTAQVGGPIATAPLAT HHCCCCCHHHHHHHHHCCCCCCCCHHCCCCCHHHCCCCCCCCCCEEHHCCCCEEECCCCC NAPSGIRPLGSSQAASLVELSNTAVGGTTPTGYVQPIQPSYNQTNYPQPNQAYSLPAASY CCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCCEECCCCCC GQAQPQYGQVTYPYVEPSGAAKFLKWLVFATLGLIVVCAGIGLMVNFGKEPPPTPKVSAQ CCCCCCCCCEEECEECCCCHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCCCCCCCCC DRTTAMLGDTMKIIVNPDFYDKSKQKAIVEPYLNNYFIEAARTNTGRLDQTVLDSFDNGV CCHHHHHCCCEEEEECCCCCCCCCCHHHHHHHHCCEEEEEECCCCCCHHHHHHHHHCCCC DQQAFLAALPYIKDAYVTPTQYTVESQTNEMITLKLISGDLVFTFHNGKFLQVPLKDTYD CHHHHHHHHCHHHCCEECCCEEEEECCCCCEEEEEEECCCEEEEEECCEEEEEECCCCCC TFTWVNDDGRWYLAGISLK CEEEECCCCCEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA