| Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
|---|---|
| Accession | NC_009972 |
| Length | 6,346,587 |
Click here to switch to the map view.
The map label for this gene is 159899137
Identifier: 159899137
GI number: 159899137
Start: 3360502
End: 3360768
Strand: Direct
Name: 159899137
Synonym: Haur_2618
Alternate gene names: NA
Gene position: 3360502-3360768 (Clockwise)
Preceding gene: 159899132
Following gene: 159899139
Centisome position: 52.95
GC content: 43.07
Gene sequence:
>267_bases TTGACTGCCGACATGCTTATCGAAACGCAAGCTGATGGAATCAAGGGGCGGATCTGGTTCTCGATTAATCGTGATACACG ACGCGAGCATAAAAACCAACAACAAGAAAATGAAGCCATTATACCGTTTCATACATCTGCTCCCACCAAGACCCGCGTTA TAAACTACCAAACCTTGTTGTCACTACAACGCGCTATTTATGCATTGATCAACCTGAACAAATGGTCAATTGTACGCCAT TTAGTACCATCAAGATCGATCGAATGA
Upstream 100 bases:
>100_bases CCAAATCCCGTGTTCCTGCTTGCAACGTGAGGTGTATCGGAATCGGCTCATTCAGGGAAAAACAATTTTTTGCTAGCTCA ATTGCTGCATCTGGACCAAA
Downstream 100 bases:
>100_bases CTTCTCACGATGAACTGACGAACGGAGATAGTTATTCTGTTTCGAGTTGATTACATGGAATATTGACATCATAGAAATTC CGCAGATAGGTGATACCAAA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 88; Mature: 87
Protein sequence:
>88_residues MTADMLIETQADGIKGRIWFSINRDTRREHKNQQQENEAIIPFHTSAPTKTRVINYQTLLSLQRAIYALINLNKWSIVRH LVPSRSIE
Sequences:
>Translated_88_residues MTADMLIETQADGIKGRIWFSINRDTRREHKNQQQENEAIIPFHTSAPTKTRVINYQTLLSLQRAIYALINLNKWSIVRH LVPSRSIE >Mature_87_residues TADMLIETQADGIKGRIWFSINRDTRREHKNQQQENEAIIPFHTSAPTKTRVINYQTLLSLQRAIYALINLNKWSIVRHL VPSRSIE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 10288; Mature: 10157
Theoretical pI: Translated: 10.55; Mature: 10.55
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 1.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTADMLIETQADGIKGRIWFSINRDTRREHKNQQQENEAIIPFHTSAPTKTRVINYQTLL CCCCCEEECCCCCCCEEEEEEECCHHHHHHCCHHHCCCEEEEEECCCCCCEEEEHHHHHH SLQRAIYALINLNKWSIVRHLVPSRSIE HHHHHHHHHHCCCHHHHHHHHCCCCCCC >Mature Secondary Structure TADMLIETQADGIKGRIWFSINRDTRREHKNQQQENEAIIPFHTSAPTKTRVINYQTLL CCCCEEECCCCCCCEEEEEEECCHHHHHHCCHHHCCCEEEEEECCCCCCEEEEHHHHHH SLQRAIYALINLNKWSIVRHLVPSRSIE HHHHHHHHHHCCCHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA