| Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
|---|---|
| Accession | NC_009972 |
| Length | 6,346,587 |
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The map label for this gene is 159899132
Identifier: 159899132
GI number: 159899132
Start: 3351866
End: 3352606
Strand: Direct
Name: 159899132
Synonym: Haur_2613
Alternate gene names: NA
Gene position: 3351866-3352606 (Clockwise)
Preceding gene: 159899131
Following gene: 159899137
Centisome position: 52.81
GC content: 54.52
Gene sequence:
>741_bases ATGCAACATTTTTATAATAGCGATCTCGGCCAGCTTCTCGCGCTTGATCCCAACCAAACCTATGCCGCTATTCCCGTCAT TTGTGCCATGCTCGAAATTCCGCATGCCCCACAGATTAAGCGCATCAAAGCTCATGCGACGCTGGCAGCAGGATTACGTC AACTCAAAGTACCCAACCTTGATGGCGAGGATGAACGGCAAGCCTGTTTGCGGATTGATCTGATTCCCCTATGGGCGGCG GGGCTTGATCCCAACAGCGTTAGCGCCGAAGCTGCGCCAATTATTCAAGCGCTGAGCAGCGAAATGGCCTCAGTGCTTTG GCAAAGTTTTCGTCCACAAGCCTTTGAAACCAACGATCAACTATTGCCCAACCGTTGGGAGCAAACTCAAGCCGAGGTGG CTTATCGCGGAGCCTTGGCTGTGGCCAATCTTACTCGTGAGCAAATGTTGCTTGAGCGCCAGCTAACCGCCGATGTTGAG GCGCGTGAAATGGGCGGAATGAGCGCCGAAATCGAAGCCAATGCAATGTTATTGGCTCGCACCGTTCGGCGAGTGGCGCA GGTAGTTGGTGAGCGCTCTCGCCGCAACGAATACCCCGCAATTTTCGATGGCTTGTATCGCCAATGGGGCATTACCACCT ATCGCCGTATGCCACAGGCTCGGCTCAACGAAGCCCTTGCTTGGCTCGAACGCTGGTACGGCGATGCCCTCGGCGAACCT GAGCCAATGCCCGATATTTAA
Upstream 100 bases:
>100_bases CAAGCACAATCCTCAGTCCACTTGACGATCAATTGGAGCTAGCCGCGCACAGCACCATGGTCGAACGTTTGCAACGCTAA GCTGTTGATAAAGGATCTTC
Downstream 100 bases:
>100_bases AGGCAGAAGTCAAAAGTCAAAAGTCAGAAGGGAAATGAGGATATAGCCAAGAGCCAAAAGCCTATAGCCTCATTTCCTTC GTGCGCTTCGTGTCCTTCGT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 246; Mature: 246
Protein sequence:
>246_residues MQHFYNSDLGQLLALDPNQTYAAIPVICAMLEIPHAPQIKRIKAHATLAAGLRQLKVPNLDGEDERQACLRIDLIPLWAA GLDPNSVSAEAAPIIQALSSEMASVLWQSFRPQAFETNDQLLPNRWEQTQAEVAYRGALAVANLTREQMLLERQLTADVE AREMGGMSAEIEANAMLLARTVRRVAQVVGERSRRNEYPAIFDGLYRQWGITTYRRMPQARLNEALAWLERWYGDALGEP EPMPDI
Sequences:
>Translated_246_residues MQHFYNSDLGQLLALDPNQTYAAIPVICAMLEIPHAPQIKRIKAHATLAAGLRQLKVPNLDGEDERQACLRIDLIPLWAA GLDPNSVSAEAAPIIQALSSEMASVLWQSFRPQAFETNDQLLPNRWEQTQAEVAYRGALAVANLTREQMLLERQLTADVE AREMGGMSAEIEANAMLLARTVRRVAQVVGERSRRNEYPAIFDGLYRQWGITTYRRMPQARLNEALAWLERWYGDALGEP EPMPDI >Mature_246_residues MQHFYNSDLGQLLALDPNQTYAAIPVICAMLEIPHAPQIKRIKAHATLAAGLRQLKVPNLDGEDERQACLRIDLIPLWAA GLDPNSVSAEAAPIIQALSSEMASVLWQSFRPQAFETNDQLLPNRWEQTQAEVAYRGALAVANLTREQMLLERQLTADVE AREMGGMSAEIEANAMLLARTVRRVAQVVGERSRRNEYPAIFDGLYRQWGITTYRRMPQARLNEALAWLERWYGDALGEP EPMPDI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 27663; Mature: 27663
Theoretical pI: Translated: 4.86; Mature: 4.86
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 3.7 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 3.7 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQHFYNSDLGQLLALDPNQTYAAIPVICAMLEIPHAPQIKRIKAHATLAAGLRQLKVPNL CCCCCCCCCCCEEEECCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCC DGEDERQACLRIDLIPLWAAGLDPNSVSAEAAPIIQALSSEMASVLWQSFRPQAFETNDQ CCCHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC LLPNRWEQTQAEVAYRGALAVANLTREQMLLERQLTADVEAREMGGMSAEIEANAMLLAR CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCCCCCHHHHHHHHHH TVRRVAQVVGERSRRNEYPAIFDGLYRQWGITTYRRMPQARLNEALAWLERWYGDALGEP HHHHHHHHHHHHHHCCCCCHHHHHHHHHHCHHHHHHCCHHHHHHHHHHHHHHHHHHCCCC EPMPDI CCCCCC >Mature Secondary Structure MQHFYNSDLGQLLALDPNQTYAAIPVICAMLEIPHAPQIKRIKAHATLAAGLRQLKVPNL CCCCCCCCCCCEEEECCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCC DGEDERQACLRIDLIPLWAAGLDPNSVSAEAAPIIQALSSEMASVLWQSFRPQAFETNDQ CCCHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC LLPNRWEQTQAEVAYRGALAVANLTREQMLLERQLTADVEAREMGGMSAEIEANAMLLAR CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCCCCCHHHHHHHHHH TVRRVAQVVGERSRRNEYPAIFDGLYRQWGITTYRRMPQARLNEALAWLERWYGDALGEP HHHHHHHHHHHHHHCCCCCHHHHHHHHHHCHHHHHHCCHHHHHHHHHHHHHHHHHHCCCC EPMPDI CCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA