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The map label for this gene is ytrF [H]

Identifier: 159899125

GI number: 159899125

Start: 3346276

End: 3347538

Strand: Direct

Name: ytrF [H]

Synonym: Haur_2606

Alternate gene names: 159899125

Gene position: 3346276-3347538 (Clockwise)

Preceding gene: 159899124

Following gene: 159899127

Centisome position: 52.73

GC content: 51.54

Gene sequence:

>1263_bases
ATGACATTTGGCGATATTTTACGCACTGCTTGGAGCAATTTAACCCGCCGCAAAGTCCGCACTTCGTTAACCTCGCTGGG
CGTGACGGTTGGGATTTTCACCATTGTGGTCATGCTTTCGTTGGGGGTCGGGGTTCAGCGGGTTATTCAGCAACAATTCG
ATGCCATCGGGCTAGAAAATGTCGTTGTTCAGCCGCGTGATGCCGAGCGCAATCCCTATACGCGCTATGTACGCCCCGAA
CGGGAAGTCGTGATTTCGCCTGCCAAAATTGCCGAATGGCAGCAACGCCCCGATATTGTCAGCGTTACCCCAATCGTCGA
TGTCAATGAATCGATCTCGAAACGGTTGGTGCTACCTGGCGATGCGACCGCAACAATTGCAGTTGGGGTTGATCCTGGGG
TTGGCATCAATAATCCTTTTGAAACGCCGCCAACCGCCTTGGCTGGTGTGTTGCGCCCCACCAAAGATGGCGAAATTGTG
ATTTCGCAGCGAGCGTTGCGCCGTTTGGGCCTTACTGCTGAAGTTAATAATCTGATTGGTCAAGAAGTCCAGTTGGTGAT
GGAAACCCCGCGCGGCGAATCGCAATCGTTCGATTATACGCTTGTAGGTGTTTCAAGTGCTGATAATAATTTGGTTGCAT
TAACCCCCAACGATAGCATTGCCCTCAAGGCTTGGTGGTTTAACGAGCCAGATTTGTTGGCAACCGAAGGCTACGATTAT
GCCTTGATTCGCGCCAAAGATTTGAATGTAGCCCGTCAATTGACCAATGAACTACGAACGCAGCGCTTTCGAGTGCAATC
AGTTGAAACTGTGCTTGAACTAGCCTCGAAAATTTTCTTGGTGATCAATATTATGCTTGGCTCGGTTGGTGGCTTGGCGC
TGTTCGTCGCCACAATCGGGATTATGAACACCATGATTATGGCGATTTATGAGCGGACTCGTGAAATTGGTACGCTCAAG
GCCATCGGAGCTTCGCGCGGCAATATTCGCACGCTCTTTATGACTGAGGCTGGCATGATTGGCTTCTTTGGGGGAGTTGT
CGGTTTGCTGGGTGGTTGGGGTACGGGCCGCATCCTCAATCGCTTTGCCCTCGCCTACCTCGAACAAGAACAAGTGCCAA
TTCGCGGTGATTTCTTCTATATTCCACCGTGGCTGATTGCCCTGGCACTGGGCTTTGGCTTGGTAGTAGGAATTATCGCG
GGCTTGTATCCCGCTGCACGTGCCGCCCGCCTTGACCCAATCAAGGCATTGCGTCACGAATAA

Upstream 100 bases:

>100_bases
ACGACATGAATGCTGCCTCGTATGCTGATCGCATTGTCCATATGCGTGATGGAGTTATTGAGCAAATTGAAATTGTTGAA
CGAACGGCGGAGGCTGTAGC

Downstream 100 bases:

>100_bases
GCTCGCTTGGTAAAGCAAATCCCCTCGCCATTGATTTGGTGAGGGGATTGCTGTTTAATCGGCATGTTTGATAAATTCGG
CCATTTTGAGCGGAATAATT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 420; Mature: 419

Protein sequence:

>420_residues
MTFGDILRTAWSNLTRRKVRTSLTSLGVTVGIFTIVVMLSLGVGVQRVIQQQFDAIGLENVVVQPRDAERNPYTRYVRPE
REVVISPAKIAEWQQRPDIVSVTPIVDVNESISKRLVLPGDATATIAVGVDPGVGINNPFETPPTALAGVLRPTKDGEIV
ISQRALRRLGLTAEVNNLIGQEVQLVMETPRGESQSFDYTLVGVSSADNNLVALTPNDSIALKAWWFNEPDLLATEGYDY
ALIRAKDLNVARQLTNELRTQRFRVQSVETVLELASKIFLVINIMLGSVGGLALFVATIGIMNTMIMAIYERTREIGTLK
AIGASRGNIRTLFMTEAGMIGFFGGVVGLLGGWGTGRILNRFALAYLEQEQVPIRGDFFYIPPWLIALALGFGLVVGIIA
GLYPAARAARLDPIKALRHE

Sequences:

>Translated_420_residues
MTFGDILRTAWSNLTRRKVRTSLTSLGVTVGIFTIVVMLSLGVGVQRVIQQQFDAIGLENVVVQPRDAERNPYTRYVRPE
REVVISPAKIAEWQQRPDIVSVTPIVDVNESISKRLVLPGDATATIAVGVDPGVGINNPFETPPTALAGVLRPTKDGEIV
ISQRALRRLGLTAEVNNLIGQEVQLVMETPRGESQSFDYTLVGVSSADNNLVALTPNDSIALKAWWFNEPDLLATEGYDY
ALIRAKDLNVARQLTNELRTQRFRVQSVETVLELASKIFLVINIMLGSVGGLALFVATIGIMNTMIMAIYERTREIGTLK
AIGASRGNIRTLFMTEAGMIGFFGGVVGLLGGWGTGRILNRFALAYLEQEQVPIRGDFFYIPPWLIALALGFGLVVGIIA
GLYPAARAARLDPIKALRHE
>Mature_419_residues
TFGDILRTAWSNLTRRKVRTSLTSLGVTVGIFTIVVMLSLGVGVQRVIQQQFDAIGLENVVVQPRDAERNPYTRYVRPER
EVVISPAKIAEWQQRPDIVSVTPIVDVNESISKRLVLPGDATATIAVGVDPGVGINNPFETPPTALAGVLRPTKDGEIVI
SQRALRRLGLTAEVNNLIGQEVQLVMETPRGESQSFDYTLVGVSSADNNLVALTPNDSIALKAWWFNEPDLLATEGYDYA
LIRAKDLNVARQLTNELRTQRFRVQSVETVLELASKIFLVINIMLGSVGGLALFVATIGIMNTMIMAIYERTREIGTLKA
IGASRGNIRTLFMTEAGMIGFFGGVVGLLGGWGTGRILNRFALAYLEQEQVPIRGDFFYIPPWLIALALGFGLVVGIIAG
LYPAARAARLDPIKALRHE

Specific function: Part of the ABC transporter complex ytrBCDEF that plays a role in acetoin utilization during stationary phase and sporulation [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Lipid-anchor (Potential). Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ABC-4 integral membrane protein family [H]

Homologues:

Organism=Escherichia coli, GI1787105, Length=448, Percent_Identity=25, Blast_Score=91, Evalue=2e-19,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003838 [H]

Pfam domain/function: PF02687 FtsX [H]

EC number: NA

Molecular weight: Translated: 45913; Mature: 45782

Theoretical pI: Translated: 9.19; Mature: 9.19

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTFGDILRTAWSNLTRRKVRTSLTSLGVTVGIFTIVVMLSLGVGVQRVIQQQFDAIGLEN
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCC
VVVQPRDAERNPYTRYVRPEREVVISPAKIAEWQQRPDIVSVTPIVDVNESISKRLVLPG
EEECCCCCCCCCCCCCCCCCCCEEECCHHHHHHHHCCCEEEECCEECCCHHHHCEEECCC
DATATIAVGVDPGVGINNPFETPPTALAGVLRPTKDGEIVISQRALRRLGLTAEVNNLIG
CCCEEEEEECCCCCCCCCCCCCCHHHHHHHCCCCCCCCEEEEHHHHHHHCCHHHHHHHHH
QEVQLVMETPRGESQSFDYTLVGVSSADNNLVALTPNDSIALKAWWFNEPDLLATEGYDY
HHHHHEEECCCCCCCCCCEEEEEECCCCCCEEEECCCCCEEEEEEECCCCCEEEECCCCE
ALIRAKDLNVARQLTNELRTQRFRVQSVETVLELASKIFLVINIMLGSVGGLALFVATIG
EEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHH
IMNTMIMAIYERTREIGTLKAIGASRGNIRTLFMTEAGMIGFFGGVVGLLGGWGTGRILN
HHHHHHHHHHHHHHHHCCHHEECCCCCCEEEEEEECCCHHHHHHHHHHHHCCCCHHHHHH
RFALAYLEQEQVPIRGDFFYIPPWLIALALGFGLVVGIIAGLYPAARAARLDPIKALRHE
HHHHHHHHHCCCCCCCCEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHCC
>Mature Secondary Structure 
TFGDILRTAWSNLTRRKVRTSLTSLGVTVGIFTIVVMLSLGVGVQRVIQQQFDAIGLEN
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCC
VVVQPRDAERNPYTRYVRPEREVVISPAKIAEWQQRPDIVSVTPIVDVNESISKRLVLPG
EEECCCCCCCCCCCCCCCCCCCEEECCHHHHHHHHCCCEEEECCEECCCHHHHCEEECCC
DATATIAVGVDPGVGINNPFETPPTALAGVLRPTKDGEIVISQRALRRLGLTAEVNNLIG
CCCEEEEEECCCCCCCCCCCCCCHHHHHHHCCCCCCCCEEEEHHHHHHHCCHHHHHHHHH
QEVQLVMETPRGESQSFDYTLVGVSSADNNLVALTPNDSIALKAWWFNEPDLLATEGYDY
HHHHHEEECCCCCCCCCCEEEEEECCCCCCEEEECCCCCEEEEEEECCCCCEEEECCCCE
ALIRAKDLNVARQLTNELRTQRFRVQSVETVLELASKIFLVINIMLGSVGGLALFVATIG
EEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHH
IMNTMIMAIYERTREIGTLKAIGASRGNIRTLFMTEAGMIGFFGGVVGLLGGWGTGRILN
HHHHHHHHHHHHHHHHCCHHEECCCCCCEEEEEEECCCHHHHHHHHHHHHCCCCHHHHHH
RFALAYLEQEQVPIRGDFFYIPPWLIALALGFGLVVGIIAGLYPAARAARLDPIKALRHE
HHHHHHHHHCCCCCCCCEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9387221; 9384377 [H]