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The map label for this gene is yibD [C]

Identifier: 159899115

GI number: 159899115

Start: 3331231

End: 3332178

Strand: Reverse

Name: yibD [C]

Synonym: Haur_2596

Alternate gene names: 159899115

Gene position: 3332178-3331231 (Counterclockwise)

Preceding gene: 159899116

Following gene: 159899114

Centisome position: 52.5

GC content: 52.22

Gene sequence:

>948_bases
ATGAGCCATCACATCGATATTCTGATTCCAAATTATAACGGCGCTAGCTTATTGGCTGCTTGCCTTGAGAGCTTGCGCCA
GCAAACCCGCCGCGATTTTCTAATTACAGTGATTGATGATGCCTCGCCTGATGGGAGCGTTCCCGCTTTACAGGCCGCCT
ATCCTGAGGTCAACTGGCTGATCCAGCCTGAAAATCAAGGCTTTGTGGCGGCAGTTAATCGTGGTTTTCAGGCAACCAGT
GCGCCTTGGGTCATCTTGCTTAATAATGATACTGAAGTTGAGCCAAGCTTTGTTGCCGCATTAATTGGTACGCTTGAGCG
TTTTCCAGCTTATGATTTTGCTGCCGCCAAAATGCTGCTCTACAGCCAACCTGATCATTTGCACACTACTGGCGATGGCT
ACAATTGGGATGGTTTGCCATGGAGTCGCGGGGTTTGGCAAGTTGATCGTGGTCAGTATGATGCAATCAGCGAGGTTTTT
GGGCCATGTGCTGGGGCAGCGGCCTATAAACGCGCTAGTTTGCAACAACTTGTCAATCACCATGGCCAATTGCTTGATCC
ATTGCTCGTGATGTATTGCGAAGATGTTGATCTCAATTTGCGGGCGCGGCGAGCTGGAATGCGCACCCTCTTTGTGCCTC
AAGCGCGAGTGCTGCATCATTTAAGTGCGACTGGTGGCGGGGTACGCGCCAGCTATTATTGTGGGCGGAATTTTATTGTG
CTGTGGTTGCGCCATATGCCACTGCAAGCGTGGCCGTATGCCTTGCCAGCTTTTTTGTGGTCGCAACTGACGATTTTTGG
TCAAGCGCTGCGCCATTGGCGTGGCGAAGCTGCCCGTGCTCGCTTACGTGGTCAGTGGGCTGGCTTGCGGCTCATTCCTC
AAATTTGGCGTGAACGAACGTTAGCCACAGCAGAAGCACAGCGGCTGCTCGCTTGGCTTGGACGATAG

Upstream 100 bases:

>100_bases
AGCATTGAGCAACAATGCCGCTGCTGCCTTGGGCATTCGCTTGCGCCGCTGGCAAGCAGCTGTAATTGCAGCAGTTGCGG
CGATCGACGAGCCAGCTTAA

Downstream 100 bases:

>100_bases
GAGTCCCCATGGCCCCGTATCTCTCGGTGGTAATTCCGGCCTATAACGAAGCCCGCCGATTACCCCAAACCTTACCTTTA
GTCTTGCAATTTCTCGCTGC

Product: glycosyl transferase family protein

Products: NA

Alternate protein names: Glycosyltransferase; Family 2 Glycosyl Transferase; Glycosyl Transferase; Glycosyl Transferase Group 2 Family Protein; Glycosyl Transferase Family 2 Protein; Glycosyl Transferase Group 2 Family; Glycosyltransferase Domain-Containing Protein; Glycosyl Transferase GT2 Family Protein; Glycosyl Transferase GT2 Family; Family 2 Glycosyltransferase; Succinoglycan Biosynthesis Protein ExoO; B-Glycosyltransferase; Glycosyl Transferase Protein; Group 2 Family Glycosyltransferase; Glycosyl Transferase Group 1/2 Family Protein; Glycosyl Transferase Group 1 Protein; Methyltransferase And Glycosyltransferase; Rhamnosyl Transferase; Glycosyltransferase/Rhamnosyltransferase; Glycosyl Transferase Domain-Containing Protein

Number of amino acids: Translated: 315; Mature: 314

Protein sequence:

>315_residues
MSHHIDILIPNYNGASLLAACLESLRQQTRRDFLITVIDDASPDGSVPALQAAYPEVNWLIQPENQGFVAAVNRGFQATS
APWVILLNNDTEVEPSFVAALIGTLERFPAYDFAAAKMLLYSQPDHLHTTGDGYNWDGLPWSRGVWQVDRGQYDAISEVF
GPCAGAAAYKRASLQQLVNHHGQLLDPLLVMYCEDVDLNLRARRAGMRTLFVPQARVLHHLSATGGGVRASYYCGRNFIV
LWLRHMPLQAWPYALPAFLWSQLTIFGQALRHWRGEAARARLRGQWAGLRLIPQIWRERTLATAEAQRLLAWLGR

Sequences:

>Translated_315_residues
MSHHIDILIPNYNGASLLAACLESLRQQTRRDFLITVIDDASPDGSVPALQAAYPEVNWLIQPENQGFVAAVNRGFQATS
APWVILLNNDTEVEPSFVAALIGTLERFPAYDFAAAKMLLYSQPDHLHTTGDGYNWDGLPWSRGVWQVDRGQYDAISEVF
GPCAGAAAYKRASLQQLVNHHGQLLDPLLVMYCEDVDLNLRARRAGMRTLFVPQARVLHHLSATGGGVRASYYCGRNFIV
LWLRHMPLQAWPYALPAFLWSQLTIFGQALRHWRGEAARARLRGQWAGLRLIPQIWRERTLATAEAQRLLAWLGR
>Mature_314_residues
SHHIDILIPNYNGASLLAACLESLRQQTRRDFLITVIDDASPDGSVPALQAAYPEVNWLIQPENQGFVAAVNRGFQATSA
PWVILLNNDTEVEPSFVAALIGTLERFPAYDFAAAKMLLYSQPDHLHTTGDGYNWDGLPWSRGVWQVDRGQYDAISEVFG
PCAGAAAYKRASLQQLVNHHGQLLDPLLVMYCEDVDLNLRARRAGMRTLFVPQARVLHHLSATGGGVRASYYCGRNFIVL
WLRHMPLQAWPYALPAFLWSQLTIFGQALRHWRGEAARARLRGQWAGLRLIPQIWRERTLATAEAQRLLAWLGR

Specific function: Unknown

COG id: COG1216

COG function: function code R; Predicted glycosyltransferases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: 2.-.-.- [C]

Molecular weight: Translated: 35394; Mature: 35263

Theoretical pI: Translated: 8.33; Mature: 8.33

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSHHIDILIPNYNGASLLAACLESLRQQTRRDFLITVIDDASPDGSVPALQAAYPEVNWL
CCCEEEEEEECCCCHHHHHHHHHHHHHHHHHCEEEEEEECCCCCCCCCCHHHCCCCCEEE
IQPENQGFVAAVNRGFQATSAPWVILLNNDTEVEPSFVAALIGTLERFPAYDFAAAKMLL
EECCCCCEEEEECCCCCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHH
YSQPDHLHTTGDGYNWDGLPWSRGVWQVDRGQYDAISEVFGPCAGAAAYKRASLQQLVNH
CCCCCCCEECCCCCCCCCCCCCCCCEEECCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHH
HGQLLDPLLVMYCEDVDLNLRARRAGMRTLFVPQARVLHHLSATGGGVRASYYCGRNFIV
CHHHHHHHHHHHHCCCCCCHHHHHCCCEEEECCHHHHHHHHHCCCCCEEEEEEECCHHEE
LWLRHMPLQAWPYALPAFLWSQLTIFGQALRHWRGEAARARLRGQWAGLRLIPQIWRERT
HHHHHCCCHHCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCHHHHHHHHHHHH
LATAEAQRLLAWLGR
HHHHHHHHHHHHHCC
>Mature Secondary Structure 
SHHIDILIPNYNGASLLAACLESLRQQTRRDFLITVIDDASPDGSVPALQAAYPEVNWL
CCEEEEEEECCCCHHHHHHHHHHHHHHHHHCEEEEEEECCCCCCCCCCHHHCCCCCEEE
IQPENQGFVAAVNRGFQATSAPWVILLNNDTEVEPSFVAALIGTLERFPAYDFAAAKMLL
EECCCCCEEEEECCCCCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHH
YSQPDHLHTTGDGYNWDGLPWSRGVWQVDRGQYDAISEVFGPCAGAAAYKRASLQQLVNH
CCCCCCCEECCCCCCCCCCCCCCCCEEECCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHH
HGQLLDPLLVMYCEDVDLNLRARRAGMRTLFVPQARVLHHLSATGGGVRASYYCGRNFIV
CHHHHHHHHHHHHCCCCCCHHHHHCCCEEEECCHHHHHHHHHCCCCCEEEEEEECCHHEE
LWLRHMPLQAWPYALPAFLWSQLTIFGQALRHWRGEAARARLRGQWAGLRLIPQIWRERT
HHHHHCCCHHCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCHHHHHHHHHHHH
LATAEAQRLLAWLGR
HHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA