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The map label for this gene is arnC [H]

Identifier: 159899114

GI number: 159899114

Start: 3330452

End: 3331222

Strand: Reverse

Name: arnC [H]

Synonym: Haur_2595

Alternate gene names: 159899114

Gene position: 3331222-3330452 (Counterclockwise)

Preceding gene: 159899115

Following gene: 159899099

Centisome position: 52.49

GC content: 54.73

Gene sequence:

>771_bases
ATGGCCCCGTATCTCTCGGTGGTAATTCCGGCCTATAACGAAGCCCGCCGATTACCCCAAACCTTACCTTTAGTCTTGCA
ATTTCTCGCTGCCCAGCCATGGTCATGGGAGTTATTGGTGGTTGATGATGGCAGTAGCGATCAAACGGTGGCGCTGGCTG
AAGCCGCTTGTCATAACTTTGCCCAAGCCCGCGTGATTCAAAACCCGCATCGTGGCAAAGGCTATACCGTGCGCACTGGC
ATGACTCAAGCGGTTGGTGAGTATGTGCTTTTCTCCGATGCCGATTTGGCCGTGCCCATGGAAGAATGGCCCAAGCTCGA
AGCCAAACTGCAACAAGGCTACGATATTGTGATTGCTTCGCGCGAGGGCGCAGGAGCCAGCCGCATCGACGAGCCATTTA
TGCGTCACCTGATGGGTCGGGTGTTCAATATCATCGTGCGGGTTTTGGGCATTGGTCAATTCCAAGATACGCAATGTGGG
TTTAAGGTATTCAGCCGCGAGGCATCCCACGACGTTTTTGGGCGCATGCGGCTGTACGACGATACCACCGAGGCTCCCAA
GGGGGCGGCAGTCACGGCCTTTGATGTTGAGGTATTGTATTTAGCCTTGCGGCGAGGCTATCGGATTGCCGAAGTTCCCG
TCACTTGGCGCTACGGCGAAGAAACCAAAGTCGATAATATCCGCGATTCTTGGCGCAACCTGCGCGATGTGCTCAAAGTC
CGCTGGAACGCGATCTCAGGCCAGTATCGCGATGTGAAACCAAGAGCATAG

Upstream 100 bases:

>100_bases
GGGCTGGCTTGCGGCTCATTCCTCAAATTTGGCGTGAACGAACGTTAGCCACAGCAGAAGCACAGCGGCTGCTCGCTTGG
CTTGGACGATAGGAGTCCCC

Downstream 100 bases:

>100_bases
AGCATATTTTATTTAACCACGAAGAACGCGAAGAACACGAAGATCAGTAAGGCAATAGGCGAGTGGCTATCGGAATAGTG
GTTGGCGTTTCAAATCAATC

Product: glycosyl transferase family protein

Products: NA

Alternate protein names: Undecaprenyl-phosphate Ara4FN transferase; Ara4FN transferase [H]

Number of amino acids: Translated: 256; Mature: 255

Protein sequence:

>256_residues
MAPYLSVVIPAYNEARRLPQTLPLVLQFLAAQPWSWELLVVDDGSSDQTVALAEAACHNFAQARVIQNPHRGKGYTVRTG
MTQAVGEYVLFSDADLAVPMEEWPKLEAKLQQGYDIVIASREGAGASRIDEPFMRHLMGRVFNIIVRVLGIGQFQDTQCG
FKVFSREASHDVFGRMRLYDDTTEAPKGAAVTAFDVEVLYLALRRGYRIAEVPVTWRYGEETKVDNIRDSWRNLRDVLKV
RWNAISGQYRDVKPRA

Sequences:

>Translated_256_residues
MAPYLSVVIPAYNEARRLPQTLPLVLQFLAAQPWSWELLVVDDGSSDQTVALAEAACHNFAQARVIQNPHRGKGYTVRTG
MTQAVGEYVLFSDADLAVPMEEWPKLEAKLQQGYDIVIASREGAGASRIDEPFMRHLMGRVFNIIVRVLGIGQFQDTQCG
FKVFSREASHDVFGRMRLYDDTTEAPKGAAVTAFDVEVLYLALRRGYRIAEVPVTWRYGEETKVDNIRDSWRNLRDVLKV
RWNAISGQYRDVKPRA
>Mature_255_residues
APYLSVVIPAYNEARRLPQTLPLVLQFLAAQPWSWELLVVDDGSSDQTVALAEAACHNFAQARVIQNPHRGKGYTVRTGM
TQAVGEYVLFSDADLAVPMEEWPKLEAKLQQGYDIVIASREGAGASRIDEPFMRHLMGRVFNIIVRVLGIGQFQDTQCGF
KVFSREASHDVFGRMRLYDDTTEAPKGAAVTAFDVEVLYLALRRGYRIAEVPVTWRYGEETKVDNIRDSWRNLRDVLKVR
WNAISGQYRDVKPRA

Specific function: Catalyzes the transfer of 4-deoxy-4-formamido-L- arabinose from UDP to undecaprenyl phosphate. The modified arabinose is attached to lipid A and is required for resistance to polymyxin and cationic antimicrobial peptides [H]

COG id: COG0463

COG function: function code M; Glycosyltransferases involved in cell wall biogenesis

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycosyltransferase 2 family [H]

Homologues:

Organism=Homo sapiens, GI7019323, Length=262, Percent_Identity=33.587786259542, Blast_Score=119, Evalue=2e-27,
Organism=Homo sapiens, GI215276969, Length=254, Percent_Identity=29.9212598425197, Blast_Score=91, Evalue=1e-18,
Organism=Homo sapiens, GI4503363, Length=226, Percent_Identity=26.9911504424779, Blast_Score=78, Evalue=7e-15,
Organism=Escherichia coli, GI1788588, Length=191, Percent_Identity=29.8429319371728, Blast_Score=77, Evalue=1e-15,
Organism=Caenorhabditis elegans, GI25146207, Length=270, Percent_Identity=29.2592592592593, Blast_Score=103, Evalue=1e-22,
Organism=Caenorhabditis elegans, GI71999402, Length=252, Percent_Identity=27.7777777777778, Blast_Score=83, Evalue=1e-16,
Organism=Saccharomyces cerevisiae, GI6325029, Length=270, Percent_Identity=33.3333333333333, Blast_Score=129, Evalue=3e-31,
Organism=Drosophila melanogaster, GI24582769, Length=262, Percent_Identity=34.7328244274809, Blast_Score=119, Evalue=2e-27,
Organism=Drosophila melanogaster, GI24585265, Length=220, Percent_Identity=30, Blast_Score=93, Evalue=2e-19,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR022857
- InterPro:   IPR001173 [H]

Pfam domain/function: PF00535 Glycos_transf_2 [H]

EC number: =2.7.8.30 [H]

Molecular weight: Translated: 28964; Mature: 28833

Theoretical pI: Translated: 7.56; Mature: 7.56

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAPYLSVVIPAYNEARRLPQTLPLVLQFLAAQPWSWELLVVDDGSSDQTVALAEAACHNF
CCCCEEEEECCCHHHHHCHHHHHHHHHHHHCCCCCEEEEEEECCCCCCEEHHHHHHHHHH
AQARVIQNPHRGKGYTVRTGMTQAVGEYVLFSDADLAVPMEEWPKLEAKLQQGYDIVIAS
HHHHHHCCCCCCCCEEEECCCHHHHCCEEEECCCCCCCCHHHHHHHHHHHHCCCEEEEEE
REGAGASRIDEPFMRHLMGRVFNIIVRVLGIGQFQDTQCGFKVFSREASHDVFGRMRLYD
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHCCCCHHHHHHEEEEC
DTTEAPKGAAVTAFDVEVLYLALRRGYRIAEVPVTWRYGEETKVDNIRDSWRNLRDVLKV
CCCCCCCCCEEEEHHHHHHHHHHHCCCEEEECCEEEECCCCCCHHHHHHHHHHHHHHHHH
RWNAISGQYRDVKPRA
HHHHCCCCCCCCCCCC
>Mature Secondary Structure 
APYLSVVIPAYNEARRLPQTLPLVLQFLAAQPWSWELLVVDDGSSDQTVALAEAACHNF
CCCEEEEECCCHHHHHCHHHHHHHHHHHHCCCCCEEEEEEECCCCCCEEHHHHHHHHHH
AQARVIQNPHRGKGYTVRTGMTQAVGEYVLFSDADLAVPMEEWPKLEAKLQQGYDIVIAS
HHHHHHCCCCCCCCEEEECCCHHHHCCEEEECCCCCCCCHHHHHHHHHHHHCCCEEEEEE
REGAGASRIDEPFMRHLMGRVFNIIVRVLGIGQFQDTQCGFKVFSREASHDVFGRMRLYD
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHCCCCHHHHHHEEEEC
DTTEAPKGAAVTAFDVEVLYLALRRGYRIAEVPVTWRYGEETKVDNIRDSWRNLRDVLKV
CCCCCCCCCEEEEHHHHHHHHHHHCCCEEEECCEEEECCCCCCHHHHHHHHHHHHHHHHH
RWNAISGQYRDVKPRA
HHHHCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA