Definition Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome.
Accession NC_009972
Length 6,346,587

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The map label for this gene is 159899107

Identifier: 159899107

GI number: 159899107

Start: 3321484

End: 3321891

Strand: Direct

Name: 159899107

Synonym: Haur_2588

Alternate gene names: NA

Gene position: 3321484-3321891 (Clockwise)

Preceding gene: 159899106

Following gene: 159899108

Centisome position: 52.33

GC content: 47.79

Gene sequence:

>408_bases
ATGGATTCGCATTGTGCAGCATGTCAAGGATTTATCAGCTATGCCGAGAACTGTTTGCAACGCCATTTTCAAGACCAACA
GTTCGTGCGCCAACAATGCGATGCCCAACATGGTGGCAGAGAATGTCTTGTGCTCTACCGTTCACCAATCTGTAGTGCCT
TGCTGGTGCTCTCAGATGGCGAGTATCACCTGGCACTTGGCAAACACACTGCCCCATTTATCACCAACCAACAACTAAAA
CTCGATGGCTCCCAAGGTTGGTACAATGTGCTCGATTTGCTTGATCGTCAAGCCAACCCATTGCAACGCTTATGGCAGAC
GTTCAAGCGCCATAAACCGAATGATCTGGCATGGGTTGCCAAGCAACTTGATGGAAAGCTAGCACAACTTACAACGCTCT
TTAAATAA

Upstream 100 bases:

>100_bases
GATTACATTCAGTTTATGCAACGCCAACGCTATTACGGCACATAAATAGCTGCCTGCCTGTAACGATACATTATAGGCAG
GCACTAACTAAAGGATGTTC

Downstream 100 bases:

>100_bases
ACCGAAATCGTTAAGCCAGCCCTTGCAAATCAGGGTCAATCAGCGGAGCAACGCAGCCAACCTGAATGGTCGCATGCAAC
AACCCATGACAATTCATGCG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 135; Mature: 135

Protein sequence:

>135_residues
MDSHCAACQGFISYAENCLQRHFQDQQFVRQQCDAQHGGRECLVLYRSPICSALLVLSDGEYHLALGKHTAPFITNQQLK
LDGSQGWYNVLDLLDRQANPLQRLWQTFKRHKPNDLAWVAKQLDGKLAQLTTLFK

Sequences:

>Translated_135_residues
MDSHCAACQGFISYAENCLQRHFQDQQFVRQQCDAQHGGRECLVLYRSPICSALLVLSDGEYHLALGKHTAPFITNQQLK
LDGSQGWYNVLDLLDRQANPLQRLWQTFKRHKPNDLAWVAKQLDGKLAQLTTLFK
>Mature_135_residues
MDSHCAACQGFISYAENCLQRHFQDQQFVRQQCDAQHGGRECLVLYRSPICSALLVLSDGEYHLALGKHTAPFITNQQLK
LDGSQGWYNVLDLLDRQANPLQRLWQTFKRHKPNDLAWVAKQLDGKLAQLTTLFK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 15473; Mature: 15473

Theoretical pI: Translated: 8.14; Mature: 8.14

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

4.4 %Cys     (Translated Protein)
0.7 %Met     (Translated Protein)
5.2 %Cys+Met (Translated Protein)
4.4 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
5.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDSHCAACQGFISYAENCLQRHFQDQQFVRQQCDAQHGGRECLVLYRSPICSALLVLSDG
CCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCCEEEEEEHHHHHHHHHHHCCC
EYHLALGKHTAPFITNQQLKLDGSQGWYNVLDLLDRQANPLQRLWQTFKRHKPNDLAWVA
CEEEEECCCCCCCCCCCEEEECCCCCHHHHHHHHHCCCCHHHHHHHHHHHCCCCHHHHHH
KQLDGKLAQLTTLFK
HHHCCHHHHHHHHCC
>Mature Secondary Structure
MDSHCAACQGFISYAENCLQRHFQDQQFVRQQCDAQHGGRECLVLYRSPICSALLVLSDG
CCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCCEEEEEEHHHHHHHHHHHCCC
EYHLALGKHTAPFITNQQLKLDGSQGWYNVLDLLDRQANPLQRLWQTFKRHKPNDLAWVA
CEEEEECCCCCCCCCCCEEEECCCCCHHHHHHHHHCCCCHHHHHHHHHHHCCCCHHHHHH
KQLDGKLAQLTTLFK
HHHCCHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA