| Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
|---|---|
| Accession | NC_009972 |
| Length | 6,346,587 |
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The map label for this gene is 159899106
Identifier: 159899106
GI number: 159899106
Start: 3320943
End: 3321428
Strand: Direct
Name: 159899106
Synonym: Haur_2587
Alternate gene names: NA
Gene position: 3320943-3321428 (Clockwise)
Preceding gene: 159899105
Following gene: 159899107
Centisome position: 52.33
GC content: 47.33
Gene sequence:
>486_bases GTGAGCAACGATTGTGGCCAATGCCAAAGCTACATCAATTATGTTGAGCAAGAACTAAGCAGCTATCTGCAAGCTGGGCA ATTTCAACGCGTTGAATGCGATTCGCAAGCCGATGGGCAGGAATGTTTGGCCTTGTATCATTCGCCAACATGCCAATTGC TGATTCAACGCACCGATGGCGCTGATTATTGCGCTTTGGGCACGTTTGAAGCCCCGTTTTTGACCGATCAAGTGCTTGAG GTCGATGGCTCACAAGGCTGGTTCAATTTGGTCTATTTGTTGGAGTTTCGTGCCAACAAAAAGATCATGACCCAACGGGT CATTGAACAATTTTGGGATGGTACTTTAGATTATCATCAGTGGTTGGCCCAATTGCTCACAGGCCAATTCGCCCAACTCT TGGCGATGTTTGAGCCTGGTGTACCAGCCACATGGTTGGCAGATTACATTCAGTTTATGCAACGCCAACGCTATTACGGC ACATAA
Upstream 100 bases:
>100_bases TGGCGGGCCAGCACAACTGGTCGGGTCATTGGCGGCAGCATCGGACCAGGTGGCGAGATTTTACAAACCAGCCAATCATT GAACGATTAAGAGGTTTTCT
Downstream 100 bases:
>100_bases ATAGCTGCCTGCCTGTAACGATACATTATAGGCAGGCACTAACTAAAGGATGTTCATGGATTCGCATTGTGCAGCATGTC AAGGATTTATCAGCTATGCC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 161; Mature: 160
Protein sequence:
>161_residues MSNDCGQCQSYINYVEQELSSYLQAGQFQRVECDSQADGQECLALYHSPTCQLLIQRTDGADYCALGTFEAPFLTDQVLE VDGSQGWFNLVYLLEFRANKKIMTQRVIEQFWDGTLDYHQWLAQLLTGQFAQLLAMFEPGVPATWLADYIQFMQRQRYYG T
Sequences:
>Translated_161_residues MSNDCGQCQSYINYVEQELSSYLQAGQFQRVECDSQADGQECLALYHSPTCQLLIQRTDGADYCALGTFEAPFLTDQVLE VDGSQGWFNLVYLLEFRANKKIMTQRVIEQFWDGTLDYHQWLAQLLTGQFAQLLAMFEPGVPATWLADYIQFMQRQRYYG T >Mature_160_residues SNDCGQCQSYINYVEQELSSYLQAGQFQRVECDSQADGQECLALYHSPTCQLLIQRTDGADYCALGTFEAPFLTDQVLEV DGSQGWFNLVYLLEFRANKKIMTQRVIEQFWDGTLDYHQWLAQLLTGQFAQLLAMFEPGVPATWLADYIQFMQRQRYYGT
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18589; Mature: 18458
Theoretical pI: Translated: 4.06; Mature: 4.06
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.7 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 6.2 %Cys+Met (Translated Protein) 3.8 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 5.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSNDCGQCQSYINYVEQELSSYLQAGQFQRVECDSQADGQECLALYHSPTCQLLIQRTDG CCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHCCCHHHEEEECCCC ADYCALGTFEAPFLTDQVLEVDGSQGWFNLVYLLEFRANKKIMTQRVIEQFWDGTLDYHQ CCEEEECCCCCCHHHHHHHHCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCHHHH WLAQLLTGQFAQLLAMFEPGVPATWLADYIQFMQRQRYYGT HHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure SNDCGQCQSYINYVEQELSSYLQAGQFQRVECDSQADGQECLALYHSPTCQLLIQRTDG CCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHCCCHHHEEEECCCC ADYCALGTFEAPFLTDQVLEVDGSQGWFNLVYLLEFRANKKIMTQRVIEQFWDGTLDYHQ CCEEEECCCCCCHHHHHHHHCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCHHHH WLAQLLTGQFAQLLAMFEPGVPATWLADYIQFMQRQRYYGT HHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA