| Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
|---|---|
| Accession | NC_009972 |
| Length | 6,346,587 |
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The map label for this gene is 159899016
Identifier: 159899016
GI number: 159899016
Start: 3192044
End: 3192502
Strand: Direct
Name: 159899016
Synonym: Haur_2497
Alternate gene names: NA
Gene position: 3192044-3192502 (Clockwise)
Preceding gene: 159899013
Following gene: 159899018
Centisome position: 50.3
GC content: 47.28
Gene sequence:
>459_bases ATGAGTGACTTGAAGTTGTTTACCCATGATTATCGGCCAACCTTGTGGCATAAATTGAACCAAACCCAGCCAATTGTAGC GATTTTCTTTCGAAATTTAGCCTGCACGATGTGCCAAGGAATGCTGCGTGTCCTCGAAGGCTACCAAGAGCAATTTCGCC AATTTCAGGCTCAGCCAGTAGTTTTAGCCAAAACCAACCCCGCCAGTTTGGCAGGCTTTATTCAACATTTCCGCCCACAA TATCCCATGCTCAGCGACCCATCAGGCGATGTTTTTCGCGCTTATAGCAACGCCAGCGAACAACTTGAATTTCAAGGCGG GATTTTGGTCTTACCACCACGCTCAATCACCGCTGTCTTTCGATTTGTGCCCCAAGGTCTTGAGCAGCAAGTACCAATCA ACGAGCTTTTGGAATGCATCAAGACCCTGAATTACTATCGTTCAAGTATCACGGCCTAG
Upstream 100 bases:
>100_bases CTAAAATCACCATCGGTATCGTTTTCGCAAACTTTTTCGTAAGGTTGAAGCCCTAGATTGACGCTAGCAAGCGATTATAG TACTGAGGTCATAGCCCCGA
Downstream 100 bases:
>100_bases CAAATGGCGATATTGGCGAGGGGTCAGACCCGTAATCAGCCGAAATTGGCGTGAAAAAGCACTATGATCAGCATAGCCAC AGGTGGCCGCAATCGCTGCA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 152; Mature: 151
Protein sequence:
>152_residues MSDLKLFTHDYRPTLWHKLNQTQPIVAIFFRNLACTMCQGMLRVLEGYQEQFRQFQAQPVVLAKTNPASLAGFIQHFRPQ YPMLSDPSGDVFRAYSNASEQLEFQGGILVLPPRSITAVFRFVPQGLEQQVPINELLECIKTLNYYRSSITA
Sequences:
>Translated_152_residues MSDLKLFTHDYRPTLWHKLNQTQPIVAIFFRNLACTMCQGMLRVLEGYQEQFRQFQAQPVVLAKTNPASLAGFIQHFRPQ YPMLSDPSGDVFRAYSNASEQLEFQGGILVLPPRSITAVFRFVPQGLEQQVPINELLECIKTLNYYRSSITA >Mature_151_residues SDLKLFTHDYRPTLWHKLNQTQPIVAIFFRNLACTMCQGMLRVLEGYQEQFRQFQAQPVVLAKTNPASLAGFIQHFRPQY PMLSDPSGDVFRAYSNASEQLEFQGGILVLPPRSITAVFRFVPQGLEQQVPINELLECIKTLNYYRSSITA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17429; Mature: 17298
Theoretical pI: Translated: 8.47; Mature: 8.47
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 4.6 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSDLKLFTHDYRPTLWHKLNQTQPIVAIFFRNLACTMCQGMLRVLEGYQEQFRQFQAQPV CCCCCHHHCCCCHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCE VLAKTNPASLAGFIQHFRPQYPMLSDPSGDVFRAYSNASEQLEFQGGILVLPPRSITAVF EEECCCHHHHHHHHHHHCCCCCCCCCCCCCHHHHHCCHHHHEEECCCEEEECCHHHHHHH RFVPQGLEQQVPINELLECIKTLNYYRSSITA HHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure SDLKLFTHDYRPTLWHKLNQTQPIVAIFFRNLACTMCQGMLRVLEGYQEQFRQFQAQPV CCCCHHHCCCCHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCE VLAKTNPASLAGFIQHFRPQYPMLSDPSGDVFRAYSNASEQLEFQGGILVLPPRSITAVF EEECCCHHHHHHHHHHHCCCCCCCCCCCCCHHHHHCCHHHHEEECCCEEEECCHHHHHHH RFVPQGLEQQVPINELLECIKTLNYYRSSITA HHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA