Definition Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome.
Accession NC_009972
Length 6,346,587

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The map label for this gene is 159898999

Identifier: 159898999

GI number: 159898999

Start: 3171343

End: 3172785

Strand: Direct

Name: 159898999

Synonym: Haur_2480

Alternate gene names: NA

Gene position: 3171343-3172785 (Clockwise)

Preceding gene: 159898998

Following gene: 159899000

Centisome position: 49.97

GC content: 41.79

Gene sequence:

>1443_bases
ATGCAACGAATTGCATTTTGTAATGTCGGTAATAGCGATGTCGCAGTCCAAGGGGCGATTATTCGGCCATCGCGACCAGC
TGGCGAACACCATTGGCAAACCTATAGCGAACATCAATTTAGCGCACCAATTATCGATGCCTTTGCTCGCTATTTTCAGC
ATCGTCAGCTTATGATTGACCGATTAATCATGTTCGACACTGATCAAGCCGATACACCTGCCAGTAGCGTGAAAGATCGC
AATAACGTTAGTTTGCGCGATAAAGATACATGTTGGTTTGGCATGATTTTAGAGCGTTATATTCAAGAACATTGGAGCCA
TGTGATTCGCATGGTCGAGCGCCGCACAATTTACGATGTTAACCCAAGTTTATACGATGATGCGATGCAAGCATTTGGCC
AACAATTAGCGAATATCAAGCATCAACCTGAAACTGAGTATTATGTTTTAGCCGCTGGCGGAACCCAAGCGTTCAATAAT
GCGCTCCAATTCAAGGCCATTGCACGTTTTCGCGAAGCCTGCTTTGTGCTCTATAAATCTGAACATGATCAATGGCCTTA
TTCGCTGAATATTCGTAAACAATTGCTCAATTCATTCAATATTTCAACTCCGATTCAATTAATTCAGCAGCATAATTTTC
TTGGGGCAATTACCTTGCTCGAAGGCTCAGTTGAGCCAGGGATTATCGGATTGTTGCGCTATGCTAAATATCGCGAGGAT
TTCGATTTTGATTCGGCTCAGCAAATTTTAGCTCAAATTCAATTTGATGTTGATGGTTCATTGCGCGATCTGGTGCGTTC
AATTCAACATACTGCATATCAAATCAATCAAGCTGACTTGAAATTTCTCTTGGTTGAGCTTTATTATAATGCCCAAATTG
CTTATACCAATGGCCGTTATGCCGATTTCCTGGGGCGTATGTTTCGCTTCCAAGAAACAGTCTTGCGCTATTTGGTTGAA
ACAACCTTCAAGCTTTCAACTGATTATAGTAAAGCGCACAAAGCTGAGAATCTTGCCAAATTTAATCAATTGTTGGTCGA
TGATCCAACACTGCACGCATATCTTGAGCAAGCAACGCTGGGTGATCAAAAGCTCGATTATCAACATTTTTCGGTGCCAG
TTTTGATCGCCATGCTCAATTTTGCCAGTGAAAAAGCTGGACAACGCTATCTCAGCAAACAGCAAGCAGGCCTGTGCATC
GGCATCCTCAAAAATCTCCATAAAATTACCAATCTAGCTCAAATGCGCAACCAGAGCATCATTGCCCATGGCTTTCAAGG
TGTTTCCAAGGAAAAAATTAACGAGGCAATGCAACTCAAACTAGAGCAAACTCCTTTGGATATACTACGCGATATATTGA
GCAAAATGCAGCTAGATTTATCTGAATCGCCGTTTCAGCAAATTCAAACGACGTTAACTCAAAAATTGTATAGCTTGATT
TAG

Upstream 100 bases:

>100_bases
GCACGACGTTATTCCCCCTCTCCCGCTTGCGGGATGAGGGGGCGAGGGGGTGAGGGCATGAAGTTAAGTTGAGGCAACAA
ACCATATTTAGGAGCTTCCC

Downstream 100 bases:

>100_bases
GAGTGAATAGTATGAGCAGATTATTGATTTGTAATATTGGCAATCGTGATATTTTATTGCCAATGGAATTGCTGCCAGTA
GAATTACATAAAGCCAGCCA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 480; Mature: 480

Protein sequence:

>480_residues
MQRIAFCNVGNSDVAVQGAIIRPSRPAGEHHWQTYSEHQFSAPIIDAFARYFQHRQLMIDRLIMFDTDQADTPASSVKDR
NNVSLRDKDTCWFGMILERYIQEHWSHVIRMVERRTIYDVNPSLYDDAMQAFGQQLANIKHQPETEYYVLAAGGTQAFNN
ALQFKAIARFREACFVLYKSEHDQWPYSLNIRKQLLNSFNISTPIQLIQQHNFLGAITLLEGSVEPGIIGLLRYAKYRED
FDFDSAQQILAQIQFDVDGSLRDLVRSIQHTAYQINQADLKFLLVELYYNAQIAYTNGRYADFLGRMFRFQETVLRYLVE
TTFKLSTDYSKAHKAENLAKFNQLLVDDPTLHAYLEQATLGDQKLDYQHFSVPVLIAMLNFASEKAGQRYLSKQQAGLCI
GILKNLHKITNLAQMRNQSIIAHGFQGVSKEKINEAMQLKLEQTPLDILRDILSKMQLDLSESPFQQIQTTLTQKLYSLI

Sequences:

>Translated_480_residues
MQRIAFCNVGNSDVAVQGAIIRPSRPAGEHHWQTYSEHQFSAPIIDAFARYFQHRQLMIDRLIMFDTDQADTPASSVKDR
NNVSLRDKDTCWFGMILERYIQEHWSHVIRMVERRTIYDVNPSLYDDAMQAFGQQLANIKHQPETEYYVLAAGGTQAFNN
ALQFKAIARFREACFVLYKSEHDQWPYSLNIRKQLLNSFNISTPIQLIQQHNFLGAITLLEGSVEPGIIGLLRYAKYRED
FDFDSAQQILAQIQFDVDGSLRDLVRSIQHTAYQINQADLKFLLVELYYNAQIAYTNGRYADFLGRMFRFQETVLRYLVE
TTFKLSTDYSKAHKAENLAKFNQLLVDDPTLHAYLEQATLGDQKLDYQHFSVPVLIAMLNFASEKAGQRYLSKQQAGLCI
GILKNLHKITNLAQMRNQSIIAHGFQGVSKEKINEAMQLKLEQTPLDILRDILSKMQLDLSESPFQQIQTTLTQKLYSLI
>Mature_480_residues
MQRIAFCNVGNSDVAVQGAIIRPSRPAGEHHWQTYSEHQFSAPIIDAFARYFQHRQLMIDRLIMFDTDQADTPASSVKDR
NNVSLRDKDTCWFGMILERYIQEHWSHVIRMVERRTIYDVNPSLYDDAMQAFGQQLANIKHQPETEYYVLAAGGTQAFNN
ALQFKAIARFREACFVLYKSEHDQWPYSLNIRKQLLNSFNISTPIQLIQQHNFLGAITLLEGSVEPGIIGLLRYAKYRED
FDFDSAQQILAQIQFDVDGSLRDLVRSIQHTAYQINQADLKFLLVELYYNAQIAYTNGRYADFLGRMFRFQETVLRYLVE
TTFKLSTDYSKAHKAENLAKFNQLLVDDPTLHAYLEQATLGDQKLDYQHFSVPVLIAMLNFASEKAGQRYLSKQQAGLCI
GILKNLHKITNLAQMRNQSIIAHGFQGVSKEKINEAMQLKLEQTPLDILRDILSKMQLDLSESPFQQIQTTLTQKLYSLI

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 55391; Mature: 55391

Theoretical pI: Translated: 7.07; Mature: 7.07

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQRIAFCNVGNSDVAVQGAIIRPSRPAGEHHWQTYSEHQFSAPIIDAFARYFQHRQLMID
CCCEEEEECCCCCEEEEEEEECCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHH
RLIMFDTDQADTPASSVKDRNNVSLRDKDTCWFGMILERYIQEHWSHVIRMVERRTIYDV
HHHHCCCCCCCCCHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEC
NPSLYDDAMQAFGQQLANIKHQPETEYYVLAAGGTQAFNNALQFKAIARFREACFVLYKS
CCHHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHCCC
EHDQWPYSLNIRKQLLNSFNISTPIQLIQQHNFLGAITLLEGSVEPGIIGLLRYAKYRED
CCCCCCEEECHHHHHHHHCCCCHHHHHHHHCCCCEEEEEECCCCCCHHHHHHHHHHHHCC
FDFDSAQQILAQIQFDVDGSLRDLVRSIQHTAYQINQADLKFLLVELYYNAQIAYTNGRY
CCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCEEEEECCCH
ADFLGRMFRFQETVLRYLVETTFKLSTDYSKAHKAENLAKFNQLLVDDPTLHAYLEQATL
HHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHC
GDQKLDYQHFSVPVLIAMLNFASEKAGQRYLSKQQAGLCIGILKNLHKITNLAQMRNQSI
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCHH
IAHGFQGVSKEKINEAMQLKLEQTPLDILRDILSKMQLDLSESPFQQIQTTLTQKLYSLI
HHHCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHC
>Mature Secondary Structure
MQRIAFCNVGNSDVAVQGAIIRPSRPAGEHHWQTYSEHQFSAPIIDAFARYFQHRQLMID
CCCEEEEECCCCCEEEEEEEECCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHH
RLIMFDTDQADTPASSVKDRNNVSLRDKDTCWFGMILERYIQEHWSHVIRMVERRTIYDV
HHHHCCCCCCCCCHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEC
NPSLYDDAMQAFGQQLANIKHQPETEYYVLAAGGTQAFNNALQFKAIARFREACFVLYKS
CCHHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHCCC
EHDQWPYSLNIRKQLLNSFNISTPIQLIQQHNFLGAITLLEGSVEPGIIGLLRYAKYRED
CCCCCCEEECHHHHHHHHCCCCHHHHHHHHCCCCEEEEEECCCCCCHHHHHHHHHHHHCC
FDFDSAQQILAQIQFDVDGSLRDLVRSIQHTAYQINQADLKFLLVELYYNAQIAYTNGRY
CCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCEEEEECCCH
ADFLGRMFRFQETVLRYLVETTFKLSTDYSKAHKAENLAKFNQLLVDDPTLHAYLEQATL
HHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHC
GDQKLDYQHFSVPVLIAMLNFASEKAGQRYLSKQQAGLCIGILKNLHKITNLAQMRNQSI
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCHH
IAHGFQGVSKEKINEAMQLKLEQTPLDILRDILSKMQLDLSESPFQQIQTTLTQKLYSLI
HHHCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA