Click here to switch to the map view.

The map label for this gene is 159898998

Identifier: 159898998

GI number: 159898998

Start: 3170109

End: 3171197

Strand: Direct

Name: 159898998

Synonym: Haur_2479

Alternate gene names: NA

Gene position: 3170109-3171197 (Clockwise)

Preceding gene: 159898997

Following gene: 159898999

Centisome position: 49.95

GC content: 51.15

Gene sequence:

>1089_bases
ATGACCAACTATGGATTAACGATTGAAACGCTCTCGCCAGTGCATATCGGCGCTGGCGGGCCAGATTTGCGCCGCAACAT
TGATTTTGCGATCTTCAACAATGTTCTCTATCTGCTCAATGTCGATGCGGTGCTTGAACAGATTTTGCCCGAAAATCCCA
ACGACCGTTTGTATCAACAAATTTTGAATACACCCGATTTGGGCAGTTTTTTAACGGCTGACCTGCTGAGCAAGCATCCA
GAGCTGTATTACTACAAACTTGAAGGCGTTTCCAAGCTAGAAACTATGCGGCCTGTGATTAAACACTGGACGCATGCGCC
CTACATTCCAGGTAGCAGCCTCAAAGGTGCTTTGCGCAGCGCATGGGTTCGCCAACACTATCAGCAGCGCAACCTAATCC
TAGATTTGCAGCAATTAAGCGATCGGCGCGAATGGGCTTTTCAGGCTCAGGAAGCACGTTTGCTTAGTCCTAAAGCATCA
CGCCCAAGCCAAAATCCCAACTATGACCTGTTTCGGGCAATTCAGGTCAGCGATAGCCAGCCCGCGCCTGCTGATGCGCT
ACGGCTTTACAACGCGGTGGTGTTTCCAGCTGCCAATCAAGGTATTCCGCTTGATTTGGAAGCGATTAAGCCGCGTGTAG
CCCTGCAAGCCCGAATCAAATTCGATGATTACATCTTGGATAAGCAGGCCAAACAATTTGGGGTGCGCGAGCAAGGATTT
AGCGTCGAGGCCTTGAAACAGGCTTGGCGCGAACAAGGCTTAGCGCGAATTCAGCAAGAATTAACCTTTTGGACTGGCCG
CCGCGAAGGCGAGCATCTCCAGCAATTCTTTAGCAACTTGGCCCAACAGGCCAATACTGCGCCCGACAACTGCTTCTATA
TCGACATTGGCTGGGGCACAGGCTGGAAGAGCAAAACCCTTGGCGATATTATCAAAACGCCGCAACTTGCCCAGTTGATG
CGCCGCTATCGGCTGAGTCGCAAGGAATATCGTGAAGGCGATCGCTTTCCAAAAACCCGCCGCGCCGCTCGTGATACCAA
AGGTGCGTTACGCGTCCCATTTGGCTGGGTCAAAGTAACGCTTAATTAG

Upstream 100 bases:

>100_bases
ATGTGGCCCCAACCTACGACACCCCCAACGCTGGCGTGAATCACCCCGTTTGGCGACATGGGCTAGCGCTCACGGTCGGT
TGTAGCGTAGGAGATTCGCA

Downstream 100 bases:

>100_bases
ACGTTTCCTCACCCCTAGCCCTCTCTCCCGCTGAGCTAGGAGATCGCACGACGTTATTCCCCCTCTCCCGCTTGCGGGAT
GAGGGGGCGAGGGGGTGAGG

Product: CRISPR-associated RAMP Csm5 family protein

Products: NA

Alternate protein names: CRISPR-Associated RAMP Protein Csm5 Family; Csm45family CRISPR-Associated RAMP Protein; Csm5 Family CRISPR-Associated RAMP Protein

Number of amino acids: Translated: 362; Mature: 361

Protein sequence:

>362_residues
MTNYGLTIETLSPVHIGAGGPDLRRNIDFAIFNNVLYLLNVDAVLEQILPENPNDRLYQQILNTPDLGSFLTADLLSKHP
ELYYYKLEGVSKLETMRPVIKHWTHAPYIPGSSLKGALRSAWVRQHYQQRNLILDLQQLSDRREWAFQAQEARLLSPKAS
RPSQNPNYDLFRAIQVSDSQPAPADALRLYNAVVFPAANQGIPLDLEAIKPRVALQARIKFDDYILDKQAKQFGVREQGF
SVEALKQAWREQGLARIQQELTFWTGRREGEHLQQFFSNLAQQANTAPDNCFYIDIGWGTGWKSKTLGDIIKTPQLAQLM
RRYRLSRKEYREGDRFPKTRRAARDTKGALRVPFGWVKVTLN

Sequences:

>Translated_362_residues
MTNYGLTIETLSPVHIGAGGPDLRRNIDFAIFNNVLYLLNVDAVLEQILPENPNDRLYQQILNTPDLGSFLTADLLSKHP
ELYYYKLEGVSKLETMRPVIKHWTHAPYIPGSSLKGALRSAWVRQHYQQRNLILDLQQLSDRREWAFQAQEARLLSPKAS
RPSQNPNYDLFRAIQVSDSQPAPADALRLYNAVVFPAANQGIPLDLEAIKPRVALQARIKFDDYILDKQAKQFGVREQGF
SVEALKQAWREQGLARIQQELTFWTGRREGEHLQQFFSNLAQQANTAPDNCFYIDIGWGTGWKSKTLGDIIKTPQLAQLM
RRYRLSRKEYREGDRFPKTRRAARDTKGALRVPFGWVKVTLN
>Mature_361_residues
TNYGLTIETLSPVHIGAGGPDLRRNIDFAIFNNVLYLLNVDAVLEQILPENPNDRLYQQILNTPDLGSFLTADLLSKHPE
LYYYKLEGVSKLETMRPVIKHWTHAPYIPGSSLKGALRSAWVRQHYQQRNLILDLQQLSDRREWAFQAQEARLLSPKASR
PSQNPNYDLFRAIQVSDSQPAPADALRLYNAVVFPAANQGIPLDLEAIKPRVALQARIKFDDYILDKQAKQFGVREQGFS
VEALKQAWREQGLARIQQELTFWTGRREGEHLQQFFSNLAQQANTAPDNCFYIDIGWGTGWKSKTLGDIIKTPQLAQLMR
RYRLSRKEYREGDRFPKTRRAARDTKGALRVPFGWVKVTLN

Specific function: Unknown

COG id: COG1332

COG function: function code L; Uncharacterized protein predicted to be involved in DNA repair (RAMP superfamily)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 41549; Mature: 41418

Theoretical pI: Translated: 10.02; Mature: 10.02

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
0.8 %Met     (Translated Protein)
1.1 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
0.6 %Met     (Mature Protein)
0.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTNYGLTIETLSPVHIGAGGPDLRRNIDFAIFNNVLYLLNVDAVLEQILPENPNDRLYQQ
CCCCCEEEEECCCEEECCCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHH
ILNTPDLGSFLTADLLSKHPELYYYKLEGVSKLETMRPVIKHWTHAPYIPGSSLKGALRS
HCCCCCCHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHH
AWVRQHYQQRNLILDLQQLSDRREWAFQAQEARLLSPKASRPSQNPNYDLFRAIQVSDSQ
HHHHHHHHHHHHEEEHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEEECCCC
PAPADALRLYNAVVFPAANQGIPLDLEAIKPRVALQARIKFDDYILDKQAKQFGVREQGF
CCCHHHHHHHHHHEECCCCCCCCCCHHHHCCCEEEEEEECHHHHHHHHHHHHCCCHHCCC
SVEALKQAWREQGLARIQQELTFWTGRREGEHLQQFFSNLAQQANTAPDNCFYIDIGWGT
CHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCCEEEEEECCCC
GWKSKTLGDIIKTPQLAQLMRRYRLSRKEYREGDRFPKTRRAARDTKGALRVPFGWVKVT
CCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHCCCCCEECCCEEEEEE
LN
EC
>Mature Secondary Structure 
TNYGLTIETLSPVHIGAGGPDLRRNIDFAIFNNVLYLLNVDAVLEQILPENPNDRLYQQ
CCCCEEEEECCCEEECCCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHH
ILNTPDLGSFLTADLLSKHPELYYYKLEGVSKLETMRPVIKHWTHAPYIPGSSLKGALRS
HCCCCCCHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHH
AWVRQHYQQRNLILDLQQLSDRREWAFQAQEARLLSPKASRPSQNPNYDLFRAIQVSDSQ
HHHHHHHHHHHHEEEHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEEECCCC
PAPADALRLYNAVVFPAANQGIPLDLEAIKPRVALQARIKFDDYILDKQAKQFGVREQGF
CCCHHHHHHHHHHEECCCCCCCCCCHHHHCCCEEEEEEECHHHHHHHHHHHHCCCHHCCC
SVEALKQAWREQGLARIQQELTFWTGRREGEHLQQFFSNLAQQANTAPDNCFYIDIGWGT
CHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCCEEEEEECCCC
GWKSKTLGDIIKTPQLAQLMRRYRLSRKEYREGDRFPKTRRAARDTKGALRVPFGWVKVT
CCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHCCCCCEECCCEEEEEE
LN
EC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA