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The map label for this gene is yecD [C]

Identifier: 159898967

GI number: 159898967

Start: 3132182

End: 3132757

Strand: Direct

Name: yecD [C]

Synonym: Haur_2448

Alternate gene names: 159898967

Gene position: 3132182-3132757 (Clockwise)

Preceding gene: 159898958

Following gene: 159898968

Centisome position: 49.35

GC content: 53.65

Gene sequence:

>576_bases
ATGGCAACTATTCGCGAAGGTAACAAGGCCGCACTCGTGGTCGTTGATGTCCAGGTCGGTGTTATGAATGGCACGTGGGA
AGCCGCTCGGGTCATCGGGAATATTGCCCACGCAGTGGAACGTGCTCGCGCTGAAAACATTCCCGTGCTGTGGGTTCAAC
ACACTGATGAGGAAATGCCGACCGATAGTCCACAGTGGCAATGGGTTCCCGAGCTAGTACCTGCCGCAGGCGAGCCACGA
ATTCACAAGCATTTTAATTCATCGTTTGAACAAACCAGCTTATCGGAAGAACTGGCGGCGTTAGAGGTCTCGCATATTGT
GCTGGCAGGGGCAGCAACCAATTGGTGCATTCGCGCCACCGCCTATGGTGTGCTCGAACGCGGGTACGATCTCACGTTGA
TCAGCGATGCACACACAACCGGATCGATCGAATTGGAGAACGGCAGCACGATCGAAGCCGCAACTATTGTTCAAGATCTC
AATATTGCCATGCAGTGGCTATCCTATCCGGATCGCACGAATGGCATAGCATCTGCTGAACAAATCAACTTCGCGCGTCC
AGGTGGCGAACAGTAG

Upstream 100 bases:

>100_bases
AATCTACGGAATAATCATCACTTAGAAGGTTGAAAATTCATCAAAATCGCACATACGTGCTATAATACCACTATTGAATT
GTGTTAAAGGAGCCGCATAT

Downstream 100 bases:

>100_bases
ATCTCACATGATGTGCCTAGGGTAGGGGAATGATTCAAGCAATCAGTTTTAGTCATTCCCCTAATCCCCATGCTGAGTCT
CTCAATTACGACGATAATAT

Product: isochorismatase hydrolase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 191; Mature: 190

Protein sequence:

>191_residues
MATIREGNKAALVVVDVQVGVMNGTWEAARVIGNIAHAVERARAENIPVLWVQHTDEEMPTDSPQWQWVPELVPAAGEPR
IHKHFNSSFEQTSLSEELAALEVSHIVLAGAATNWCIRATAYGVLERGYDLTLISDAHTTGSIELENGSTIEAATIVQDL
NIAMQWLSYPDRTNGIASAEQINFARPGGEQ

Sequences:

>Translated_191_residues
MATIREGNKAALVVVDVQVGVMNGTWEAARVIGNIAHAVERARAENIPVLWVQHTDEEMPTDSPQWQWVPELVPAAGEPR
IHKHFNSSFEQTSLSEELAALEVSHIVLAGAATNWCIRATAYGVLERGYDLTLISDAHTTGSIELENGSTIEAATIVQDL
NIAMQWLSYPDRTNGIASAEQINFARPGGEQ
>Mature_190_residues
ATIREGNKAALVVVDVQVGVMNGTWEAARVIGNIAHAVERARAENIPVLWVQHTDEEMPTDSPQWQWVPELVPAAGEPRI
HKHFNSSFEQTSLSEELAALEVSHIVLAGAATNWCIRATAYGVLERGYDLTLISDAHTTGSIELENGSTIEAATIVQDLN
IAMQWLSYPDRTNGIASAEQINFARPGGEQ

Specific function: Unknown

COG id: COG1335

COG function: function code Q; Amidases related to nicotinamidase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the isochorismatase family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000868 [H]

Pfam domain/function: PF00857 Isochorismatase [H]

EC number: NA

Molecular weight: Translated: 20812; Mature: 20681

Theoretical pI: Translated: 4.38; Mature: 4.38

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MATIREGNKAALVVVDVQVGVMNGTWEAARVIGNIAHAVERARAENIPVLWVQHTDEEMP
CCCCCCCCCEEEEEEEEEEEEECCCHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCC
TDSPQWQWVPELVPAAGEPRIHKHFNSSFEQTSLSEELAALEVSHIVLAGAATNWCIRAT
CCCCCCEECHHHCCCCCCCHHHHHHCCCHHHHHHHHHHHHHHHHHEEEECCCCCEEHHHH
AYGVLERGYDLTLISDAHTTGSIELENGSTIEAATIVQDLNIAMQWLSYPDRTNGIASAE
HHHHHHCCCCEEEEECCCCCCEEEECCCCEEHHHHHHHHHHHHHHHHCCCCCCCCCCCHH
QINFARPGGEQ
HEEECCCCCCC
>Mature Secondary Structure 
ATIREGNKAALVVVDVQVGVMNGTWEAARVIGNIAHAVERARAENIPVLWVQHTDEEMP
CCCCCCCCEEEEEEEEEEEEECCCHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCC
TDSPQWQWVPELVPAAGEPRIHKHFNSSFEQTSLSEELAALEVSHIVLAGAATNWCIRAT
CCCCCCEECHHHCCCCCCCHHHHHHCCCHHHHHHHHHHHHHHHHHEEEECCCCCEEHHHH
AYGVLERGYDLTLISDAHTTGSIELENGSTIEAATIVQDLNIAMQWLSYPDRTNGIASAE
HHHHHHCCCCEEEEECCCCCCEEEECCCCEEHHHHHHHHHHHHHHHHCCCCCCCCCCCHH
QINFARPGGEQ
HEEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA