Definition Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome.
Accession NC_009972
Length 6,346,587

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The map label for this gene is 159898912

Identifier: 159898912

GI number: 159898912

Start: 3046789

End: 3047571

Strand: Reverse

Name: 159898912

Synonym: Haur_2391

Alternate gene names: NA

Gene position: 3047571-3046789 (Counterclockwise)

Preceding gene: 159898913

Following gene: 159898911

Centisome position: 48.02

GC content: 51.72

Gene sequence:

>783_bases
ATGATTGATCGTTTTTGGCAGGTGTTGGATCTTGACCCAATCACATGGCGCAATATTGGGCGCTTTATCGAGGTTGGCAA
ATACATCCAAGCTGCGCGGCCTGGCGAACATGGCTTATATGTGCTCCACGATGGTCAGAACATTTTACGGGCGGTTGATA
GCAACAATCATGTGCAACGTGAAATTACTGGCAATTTGACTACCACGCCCCAAGCTTTAGCCGAAGAATTAGCGAGCGAA
GGGCGTTGGGATCGGGTGCATGTGATTAGTAAGCAGCATTTGGCCGAGGTTGCCAAACAAGCTCAACAACCTGAGCAACG
CAGTTTGAGTATGCCAGCGTACTATCATTTGGTCTATTCGTTGCTCTGGGGTGATGGCCAAGGCTATGTCACGGTTCCGC
CGCCAGCAGGCCATTGGAACTATTGGACTTATCGTGGCATCGAGCAATTTGTGACCCAACTTGGCTCAGAGGCAGGTATG
GCGCTGTGCGTATTTGATGGTGAACAATTGGCGATTGGCCTGATTGCTGAATTGCGCAATGGACAAGTCGCCTATGTGAC
AACTTTCGATGCCTATGCGGCTGAAGCTGCACCACAATTGAGCGCAACTGGTTTGGAGCAGCTATGGCAATTGCTCGAAC
AACGCGGCGTGCCAGCGGCAGCAGCATTAATCTGTAGCCGAGCAGCTTTTGAAGCGTGGTTGGTTGTGCCCGATAAAATT
GCCAGCTTACGCCAAGCGGCTACAGCTGGTGAGGCTTGGTGGCGCTTGCGCGAGGCATTGTAG

Upstream 100 bases:

>100_bases
CGCTTAACCAGCTTGTGGGGAGCATTCGCTGGCGCTGATCTTCAACAACAGCAGCCGATTAGCCTAGCAGCCTACACGAT
TGCAATTGTCGAGGTGCAGC

Downstream 100 bases:

>100_bases
CAAAGCTATAGCTCAAAAACACCACTGAAGAGTTGCATCAATTGCCATGAAATACTATGATGCATGCAACGAATTTTTAA
TCATTACACTGCGTGGCAAG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 260; Mature: 260

Protein sequence:

>260_residues
MIDRFWQVLDLDPITWRNIGRFIEVGKYIQAARPGEHGLYVLHDGQNILRAVDSNNHVQREITGNLTTTPQALAEELASE
GRWDRVHVISKQHLAEVAKQAQQPEQRSLSMPAYYHLVYSLLWGDGQGYVTVPPPAGHWNYWTYRGIEQFVTQLGSEAGM
ALCVFDGEQLAIGLIAELRNGQVAYVTTFDAYAAEAAPQLSATGLEQLWQLLEQRGVPAAAALICSRAAFEAWLVVPDKI
ASLRQAATAGEAWWRLREAL

Sequences:

>Translated_260_residues
MIDRFWQVLDLDPITWRNIGRFIEVGKYIQAARPGEHGLYVLHDGQNILRAVDSNNHVQREITGNLTTTPQALAEELASE
GRWDRVHVISKQHLAEVAKQAQQPEQRSLSMPAYYHLVYSLLWGDGQGYVTVPPPAGHWNYWTYRGIEQFVTQLGSEAGM
ALCVFDGEQLAIGLIAELRNGQVAYVTTFDAYAAEAAPQLSATGLEQLWQLLEQRGVPAAAALICSRAAFEAWLVVPDKI
ASLRQAATAGEAWWRLREAL
>Mature_260_residues
MIDRFWQVLDLDPITWRNIGRFIEVGKYIQAARPGEHGLYVLHDGQNILRAVDSNNHVQREITGNLTTTPQALAEELASE
GRWDRVHVISKQHLAEVAKQAQQPEQRSLSMPAYYHLVYSLLWGDGQGYVTVPPPAGHWNYWTYRGIEQFVTQLGSEAGM
ALCVFDGEQLAIGLIAELRNGQVAYVTTFDAYAAEAAPQLSATGLEQLWQLLEQRGVPAAAALICSRAAFEAWLVVPDKI
ASLRQAATAGEAWWRLREAL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 29008; Mature: 29008

Theoretical pI: Translated: 5.31; Mature: 5.31

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIDRFWQVLDLDPITWRNIGRFIEVGKYIQAARPGEHGLYVLHDGQNILRAVDSNNHVQR
CCCHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCCCEEEEECCHHHHHHHCCCCCEEE
EITGNLTTTPQALAEELASEGRWDRVHVISKQHLAEVAKQAQQPEQRSLSMPAYYHLVYS
EECCCCCCCHHHHHHHHHHCCCCCEEEHHHHHHHHHHHHHHCCCHHHCCCCCHHHHHHHH
LLWGDGQGYVTVPPPAGHWNYWTYRGIEQFVTQLGSEAGMALCVFDGEQLAIGLIAELRN
HHHCCCCCEEECCCCCCCCCCEEHHHHHHHHHHHCCCCCEEEEEECCCHHHHHHHHHHCC
GQVAYVTTFDAYAAEAAPQLSATGLEQLWQLLEQRGVPAAAALICSRAAFEAWLVVPDKI
CCEEEEEECHHHHHHCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHEEECHHHH
ASLRQAATAGEAWWRLREAL
HHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MIDRFWQVLDLDPITWRNIGRFIEVGKYIQAARPGEHGLYVLHDGQNILRAVDSNNHVQR
CCCHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCCCEEEEECCHHHHHHHCCCCCEEE
EITGNLTTTPQALAEELASEGRWDRVHVISKQHLAEVAKQAQQPEQRSLSMPAYYHLVYS
EECCCCCCCHHHHHHHHHHCCCCCEEEHHHHHHHHHHHHHHCCCHHHCCCCCHHHHHHHH
LLWGDGQGYVTVPPPAGHWNYWTYRGIEQFVTQLGSEAGMALCVFDGEQLAIGLIAELRN
HHHCCCCCEEECCCCCCCCCCEEHHHHHHHHHHHCCCCCEEEEEECCCHHHHHHHHHHCC
GQVAYVTTFDAYAAEAAPQLSATGLEQLWQLLEQRGVPAAAALICSRAAFEAWLVVPDKI
CCEEEEEECHHHHHHCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHEEECHHHH
ASLRQAATAGEAWWRLREAL
HHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA