| Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
|---|---|
| Accession | NC_009972 |
| Length | 6,346,587 |
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The map label for this gene is 159898881
Identifier: 159898881
GI number: 159898881
Start: 3007476
End: 3008000
Strand: Reverse
Name: 159898881
Synonym: Haur_2360
Alternate gene names: NA
Gene position: 3008000-3007476 (Counterclockwise)
Preceding gene: 159898884
Following gene: 159898880
Centisome position: 47.4
GC content: 45.14
Gene sequence:
>525_bases ATGCAAACGGCAACGACGATCAAAAAAGGCAATCGAACCAAAACCAATTATGTTGTCGATCTGGTGATTGGAATCAGTTT TTTGATTGCGACTGCTCCCAATGCCACGGGCGAGCCAATTCACGAGTGGTTGAGCATGGGTTTGGCGGTGATGGTGGTAA CCCACTTGTTATTACATTGGCAATGGATTGTGGCAATTACCAAGAAAATTTTTCGTAAAGTTGCTTGGCAACAACGGATC AATTACATCTTAAATATTGGCTTGTTTATTGATATGACGATCATCATGTTCACCGGAATTATGATTTCTAAGACGGTTGT ACCGCTGCTTGGGCTGGAATTGCCCAACAATATGACATGGCGCAGCTTGCACGGTCTGGCTTCGGATGCTGGCGTGTTTT TGATTGGCTTGCACTTGGCATTGCACTGGGATTGGATTGTGCGCACCAGCAAGCGCTATTTGATTCAGCCAATCACTAAA CGTTTCCACAAACCTGCCCCCCAATTAGCTACCAAGGAGCAATAA
Upstream 100 bases:
>100_bases CCTCATAGATTGCTCGAAAGTTCTTCATAATCTTTGAACAATCATTTTTTATACTGCACTCAGCGATTTGAAATACCCTG ATGCACAAAGGAATGAGTAT
Downstream 100 bases:
>100_bases TTATGAAATTACTCGGACGTATATTAATCATTGCGCTGGCTGTGGCCTTGGTAATTGGCAGTTTGGTGGCAATTGTGCCC AGTAGCTCGGCGGCGGGGTT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 174; Mature: 174
Protein sequence:
>174_residues MQTATTIKKGNRTKTNYVVDLVIGISFLIATAPNATGEPIHEWLSMGLAVMVVTHLLLHWQWIVAITKKIFRKVAWQQRI NYILNIGLFIDMTIIMFTGIMISKTVVPLLGLELPNNMTWRSLHGLASDAGVFLIGLHLALHWDWIVRTSKRYLIQPITK RFHKPAPQLATKEQ
Sequences:
>Translated_174_residues MQTATTIKKGNRTKTNYVVDLVIGISFLIATAPNATGEPIHEWLSMGLAVMVVTHLLLHWQWIVAITKKIFRKVAWQQRI NYILNIGLFIDMTIIMFTGIMISKTVVPLLGLELPNNMTWRSLHGLASDAGVFLIGLHLALHWDWIVRTSKRYLIQPITK RFHKPAPQLATKEQ >Mature_174_residues MQTATTIKKGNRTKTNYVVDLVIGISFLIATAPNATGEPIHEWLSMGLAVMVVTHLLLHWQWIVAITKKIFRKVAWQQRI NYILNIGLFIDMTIIMFTGIMISKTVVPLLGLELPNNMTWRSLHGLASDAGVFLIGLHLALHWDWIVRTSKRYLIQPITK RFHKPAPQLATKEQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19821; Mature: 19821
Theoretical pI: Translated: 10.92; Mature: 10.92
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 4.0 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 4.0 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQTATTIKKGNRTKTNYVVDLVIGISFLIATAPNATGEPIHEWLSMGLAVMVVTHLLLHW CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH QWIVAITKKIFRKVAWQQRINYILNIGLFIDMTIIMFTGIMISKTVVPLLGLELPNNMTW HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCH RSLHGLASDAGVFLIGLHLALHWDWIVRTSKRYLIQPITKRFHKPAPQLATKEQ HHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC >Mature Secondary Structure MQTATTIKKGNRTKTNYVVDLVIGISFLIATAPNATGEPIHEWLSMGLAVMVVTHLLLHW CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH QWIVAITKKIFRKVAWQQRINYILNIGLFIDMTIIMFTGIMISKTVVPLLGLELPNNMTW HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCH RSLHGLASDAGVFLIGLHLALHWDWIVRTSKRYLIQPITKRFHKPAPQLATKEQ HHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA