| Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
|---|---|
| Accession | NC_009972 |
| Length | 6,346,587 |
Click here to switch to the map view.
The map label for this gene is resE [H]
Identifier: 159898878
GI number: 159898878
Start: 3004994
End: 3006370
Strand: Reverse
Name: resE [H]
Synonym: Haur_2357
Alternate gene names: 159898878
Gene position: 3006370-3004994 (Counterclockwise)
Preceding gene: 159898879
Following gene: 159898877
Centisome position: 47.37
GC content: 50.98
Gene sequence:
>1377_bases ATGATGATGTTACGCTCACTGACATGGAAATTAACCCTCGCTTTTTTGGGGGTCGGCTTGATTGGGGCTGTGGTCGTGGC CTTGTTGGCGCGGCAGAGTGCCCGCAGCGAGTTTGATCGCTTTTTATCCGAGCGCGATCAAACCGAATTAATCAACGCCG TCACAACCTTTTATATGAGCTATTCGACGTGGGACGGCTTGGAATCGGCATTAAATCAAGAGGCTGATTTAGCTTTTTAT CGCCGCAGTGCCACGCTGTTTGATCGTGATGGCAACGTGATTTTGGCCAACGGCCCGTATGTACCAGGCATGATTGCCGA TCAAGCCACATTAAATGCGACTCAGCCTTTAACTGTTGCCAATCAAACTATTGGTTACATTGCTTTTGGCATGATCCAAA CCGCCCAACCGCCAGCGCCAAGTGCTGATCAAATGATCAAAGATGGGCCGCGGCCCCAAGATTCGTTCGATCAACGGATT ACCTGGGCAATTGGGGTCAGTGCGATTTTTGCTACGAGCGTAGCCTTGTTGGTGGGCACATTCTTGGCTCGTCGCCTAAC CCGCTCGTTGCGCGAGTTGACGGTCGCGACCCAAGCTATGGCGGCTGGCCAGTTGGAGCAGCAAGTTGCGGTGCGTTCAA ACGATGAAATTGGCGATTTGGCCCGTTCGTTTAATCATATGAGTGCCGATTTGAGCAAAGCCACCCATTTGCGCAAACAG ATGACCGCTGATTTAGCTCATGATTTGCGCACGCCCTTGAGTATTTTGCGTGGCTATGCTGAGGGCTTGCGCGACGGCGT TTTGCAACCATCAGAGACAATTTACACGGTGATTTTTGATGAAGTGACCCACCTACAACGCTTGGTTGACGATTTGCGGG TGCTTTCGTTGGCCGATGCGGGCGAGCTTTCGCTTAATCGGCGCTTGGTTGATCCGGCGGCCTTGATCGAGCGCACGATT TTGAGTGCCTTTGTGCAGGCTGAACGCCAAAATATCGAACTTAAATTAGAAACTGAAGCTGGCCTACCATCGGTTTCGGT CGATACTGATCGCATGGCCCAAGTCTTGAATAATTTAGTTAATAATGCCCTGCGCCATACCAAACAAGGCAGTATTAGCC TGATTGCCAAACGTCAAGCGCAGCAGGTGCAATTGATTATTCGCGATACTGGCAGCGGCATCGATCCTGCTGATGTGCCC TACATTTTCGCGCGTTTCTATCGGGGCGATAGCTCGCGCCAACGTGAAGATCAAGCCTCGACAGGCTTGGGATTGGCGAT TGTCAAGGCGATTGTTGAAGCGCATCAAGGCCAAATCGAGGTTGAATCAAGCTTGGGCGAAGGTACGAGCTTTATTATCA GTTTACCGATTGCTTGA
Upstream 100 bases:
>100_bases GCAATTTGCGCAGCAAAATCGAGCCAGACCCGAAAAATCCGCGCTATATCGAAACTGTGTATGGGGTTGGCTATCGTTTT GCCCGCCCGAAACGGCCTGA
Downstream 100 bases:
>100_bases CAATTAAGATATAATGAAACATATGTTCGTTTAGTAAGGGCGGGTTCAATGCAAATTAAAATGACCAGTGTTTTTGTCGA TGATCAAACCAAGGCCTTGA
Product: integral membrane sensor signal transduction histidine kinase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 458; Mature: 458
Protein sequence:
>458_residues MMMLRSLTWKLTLAFLGVGLIGAVVVALLARQSARSEFDRFLSERDQTELINAVTTFYMSYSTWDGLESALNQEADLAFY RRSATLFDRDGNVILANGPYVPGMIADQATLNATQPLTVANQTIGYIAFGMIQTAQPPAPSADQMIKDGPRPQDSFDQRI TWAIGVSAIFATSVALLVGTFLARRLTRSLRELTVATQAMAAGQLEQQVAVRSNDEIGDLARSFNHMSADLSKATHLRKQ MTADLAHDLRTPLSILRGYAEGLRDGVLQPSETIYTVIFDEVTHLQRLVDDLRVLSLADAGELSLNRRLVDPAALIERTI LSAFVQAERQNIELKLETEAGLPSVSVDTDRMAQVLNNLVNNALRHTKQGSISLIAKRQAQQVQLIIRDTGSGIDPADVP YIFARFYRGDSSRQREDQASTGLGLAIVKAIVEAHQGQIEVESSLGEGTSFIISLPIA
Sequences:
>Translated_458_residues MMMLRSLTWKLTLAFLGVGLIGAVVVALLARQSARSEFDRFLSERDQTELINAVTTFYMSYSTWDGLESALNQEADLAFY RRSATLFDRDGNVILANGPYVPGMIADQATLNATQPLTVANQTIGYIAFGMIQTAQPPAPSADQMIKDGPRPQDSFDQRI TWAIGVSAIFATSVALLVGTFLARRLTRSLRELTVATQAMAAGQLEQQVAVRSNDEIGDLARSFNHMSADLSKATHLRKQ MTADLAHDLRTPLSILRGYAEGLRDGVLQPSETIYTVIFDEVTHLQRLVDDLRVLSLADAGELSLNRRLVDPAALIERTI LSAFVQAERQNIELKLETEAGLPSVSVDTDRMAQVLNNLVNNALRHTKQGSISLIAKRQAQQVQLIIRDTGSGIDPADVP YIFARFYRGDSSRQREDQASTGLGLAIVKAIVEAHQGQIEVESSLGEGTSFIISLPIA >Mature_458_residues MMMLRSLTWKLTLAFLGVGLIGAVVVALLARQSARSEFDRFLSERDQTELINAVTTFYMSYSTWDGLESALNQEADLAFY RRSATLFDRDGNVILANGPYVPGMIADQATLNATQPLTVANQTIGYIAFGMIQTAQPPAPSADQMIKDGPRPQDSFDQRI TWAIGVSAIFATSVALLVGTFLARRLTRSLRELTVATQAMAAGQLEQQVAVRSNDEIGDLARSFNHMSADLSKATHLRKQ MTADLAHDLRTPLSILRGYAEGLRDGVLQPSETIYTVIFDEVTHLQRLVDDLRVLSLADAGELSLNRRLVDPAALIERTI LSAFVQAERQNIELKLETEAGLPSVSVDTDRMAQVLNNLVNNALRHTKQGSISLIAKRQAQQVQLIIRDTGSGIDPADVP YIFARFYRGDSSRQREDQASTGLGLAIVKAIVEAHQGQIEVESSLGEGTSFIISLPIA
Specific function: Member of the two-component regulatory system resD/resE involved in the global regulation of aerobic and anaerobic respiration. Probably phosphorylates resD [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Probable) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 PAS (PER-ARNT-SIM) domain [H]
Homologues:
Organism=Escherichia coli, GI1788393, Length=278, Percent_Identity=37.0503597122302, Blast_Score=157, Evalue=1e-39, Organism=Escherichia coli, GI1786783, Length=297, Percent_Identity=30.3030303030303, Blast_Score=119, Evalue=6e-28, Organism=Escherichia coli, GI1786600, Length=227, Percent_Identity=32.5991189427313, Blast_Score=114, Evalue=1e-26, Organism=Escherichia coli, GI1787894, Length=322, Percent_Identity=28.5714285714286, Blast_Score=97, Evalue=2e-21, Organism=Escherichia coli, GI1790436, Length=221, Percent_Identity=32.1266968325792, Blast_Score=97, Evalue=2e-21, Organism=Escherichia coli, GI1790346, Length=272, Percent_Identity=29.7794117647059, Blast_Score=94, Evalue=2e-20, Organism=Escherichia coli, GI1788713, Length=235, Percent_Identity=28.0851063829787, Blast_Score=94, Evalue=2e-20, Organism=Escherichia coli, GI1790861, Length=339, Percent_Identity=29.2035398230088, Blast_Score=93, Evalue=4e-20, Organism=Escherichia coli, GI145693157, Length=240, Percent_Identity=26.25, Blast_Score=91, Evalue=1e-19, Organism=Escherichia coli, GI87081816, Length=258, Percent_Identity=29.0697674418605, Blast_Score=91, Evalue=2e-19, Organism=Escherichia coli, GI1789808, Length=300, Percent_Identity=28.3333333333333, Blast_Score=90, Evalue=3e-19, Organism=Escherichia coli, GI1789149, Length=332, Percent_Identity=24.6987951807229, Blast_Score=89, Evalue=6e-19, Organism=Escherichia coli, GI1790551, Length=279, Percent_Identity=29.0322580645161, Blast_Score=85, Evalue=1e-17, Organism=Escherichia coli, GI1788549, Length=224, Percent_Identity=29.9107142857143, Blast_Score=85, Evalue=1e-17, Organism=Escherichia coli, GI1786912, Length=232, Percent_Identity=30.1724137931034, Blast_Score=84, Evalue=1e-17, Organism=Escherichia coli, GI48994928, Length=229, Percent_Identity=26.2008733624454, Blast_Score=82, Evalue=8e-17, Organism=Escherichia coli, GI1788279, Length=305, Percent_Identity=27.2131147540984, Blast_Score=79, Evalue=4e-16, Organism=Escherichia coli, GI1790300, Length=232, Percent_Identity=29.7413793103448, Blast_Score=73, Evalue=4e-14, Organism=Escherichia coli, GI87082128, Length=245, Percent_Identity=27.7551020408163, Blast_Score=72, Evalue=5e-14, Organism=Escherichia coli, GI1789403, Length=292, Percent_Identity=25, Blast_Score=65, Evalue=1e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003594 - InterPro: IPR003660 - InterPro: IPR000014 - InterPro: IPR013767 - InterPro: IPR004358 - InterPro: IPR003661 - InterPro: IPR005467 - InterPro: IPR009082 [H]
Pfam domain/function: PF00672 HAMP; PF02518 HATPase_c; PF00512 HisKA; PF00989 PAS [H]
EC number: =2.7.13.3 [H]
Molecular weight: Translated: 50131; Mature: 50131
Theoretical pI: Translated: 5.16; Mature: 5.16
Prosite motif: PS50885 HAMP ; PS50109 HIS_KIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMMLRSLTWKLTLAFLGVGLIGAVVVALLARQSARSEFDRFLSERDQTELINAVTTFYMS CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHH YSTWDGLESALNQEADLAFYRRSATLFDRDGNVILANGPYVPGMIADQATLNATQPLTVA HHHHHHHHHHHCCHHHHHHHHHCCCEEECCCCEEEECCCCCCCEECCCCCCCCCCCCHHH NQTIGYIAFGMIQTAQPPAPSADQMIKDGPRPQDSFDQRITWAIGVSAIFATSVALLVGT HHHHHHHHHHHHHCCCCCCCCHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH FLARRLTRSLRELTVATQAMAAGQLEQQVAVRSNDEIGDLARSFNHMSADLSKATHLRKQ HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHH MTADLAHDLRTPLSILRGYAEGLRDGVLQPSETIYTVIFDEVTHLQRLVDDLRVLSLADA HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCC GELSLNRRLVDPAALIERTILSAFVQAERQNIELKLETEAGLPSVSVDTDRMAQVLNNLV CCCCCCHHCCCHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCHHHHHHHHHHHH NNALRHTKQGSISLIAKRQAQQVQLIIRDTGSGIDPADVPYIFARFYRGDSSRQREDQAS HHHHHHCCCCCHHHHHHHHHHHHEEEEEECCCCCCCCHHHHHHHHHHCCCCCHHHHHHHH TGLGLAIVKAIVEAHQGQIEVESSLGEGTSFIISLPIA CCHHHHHHHHHHHHHCCCEEEECCCCCCCEEEEECCCC >Mature Secondary Structure MMMLRSLTWKLTLAFLGVGLIGAVVVALLARQSARSEFDRFLSERDQTELINAVTTFYMS CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHH YSTWDGLESALNQEADLAFYRRSATLFDRDGNVILANGPYVPGMIADQATLNATQPLTVA HHHHHHHHHHHCCHHHHHHHHHCCCEEECCCCEEEECCCCCCCEECCCCCCCCCCCCHHH NQTIGYIAFGMIQTAQPPAPSADQMIKDGPRPQDSFDQRITWAIGVSAIFATSVALLVGT HHHHHHHHHHHHHCCCCCCCCHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH FLARRLTRSLRELTVATQAMAAGQLEQQVAVRSNDEIGDLARSFNHMSADLSKATHLRKQ HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHH MTADLAHDLRTPLSILRGYAEGLRDGVLQPSETIYTVIFDEVTHLQRLVDDLRVLSLADA HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCC GELSLNRRLVDPAALIERTILSAFVQAERQNIELKLETEAGLPSVSVDTDRMAQVLNNLV CCCCCCHHCCCHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCHHHHHHHHHHHH NNALRHTKQGSISLIAKRQAQQVQLIIRDTGSGIDPADVPYIFARFYRGDSSRQREDQAS HHHHHHCCCCCHHHHHHHHHHHHEEEEEECCCCCCCCHHHHHHHHHHCCCCCHHHHHHHH TGLGLAIVKAIVEAHQGQIEVESSLGEGTSFIISLPIA CCHHHHHHHHHHHHHCCCEEEECCCCCCCEEEEECCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 7934829; 9384377; 8631715 [H]