| Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
|---|---|
| Accession | NC_009972 |
| Length | 6,346,587 |
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The map label for this gene is ahcY [H]
Identifier: 159898873
GI number: 159898873
Start: 3000780
End: 3002042
Strand: Direct
Name: ahcY [H]
Synonym: Haur_2352
Alternate gene names: 159898873
Gene position: 3000780-3002042 (Clockwise)
Preceding gene: 159898872
Following gene: 159898874
Centisome position: 47.28
GC content: 51.54
Gene sequence:
>1263_bases GTGGCTAAGGATTTCGATATTAAGGATATTAAGCTGGCCGACGAAGGCATGCGCCGCATCGCCTGGGCCGAGCAAGAAAT GCCAGTCTTGCGCCAATTGCGCGAACGGTTCAGCAAAGAACGTCCACTTGAAGGCATCAAGATGTCGGCATGTTTGCACG TTACCGCTGAAACCGCTAACTTGATGCGTGCGCTCCAAGCTGGTGGCGCTGATATTGTGTTGGCAGCTTCAAACCCACTT TCAACCCAAGACGATGTTGCCGCAGCGCTGGTGCAATACGACGAAATCCCCGTCTATGCCATCAAGGGCGAAGATAACGC AACCTATTACAATCACTTGAAAGCCGCCCTCGACCACGCTCCTCACATCACCATGGACGATGGTGCCGACCTCGTGAGCG CCGTGTTGAAAGATCGCCGCGAATTGTTGCCAAACTTGATTGGCTCAACCGAAGAAACCACCACTGGTGTGATTCGGCTT CGCGCGATGGCCAACCAAGGCGTGCTCGAATTCCCAGTGATCGCGGTTAACGATAGCCAAACCAAGCATTTGTTTGACAA CCGCTATGGCACTGGCCAATCAACCCTCGACGGGATCATCCGCGCAACCAATGTGTTGATCGCTGGTAAAACCGTGGTTG TGGCTGGTTACGGCTGGTGTTCAAAAGGGATCGCAATGCGTGCCCACGGTCTCGGCGCAAACGTGATTGTTACCGAAATC GATTCAATCAAGGCGCTCGAAGCTGCAATGGACGGCTTCCGCGTGATGCCAATGGTTGATGCAGCTCGCATCGGCGATAT CTTCATCACCGCAACTGGCGATATTCACGTGCTTGACGGCGAAGATTTCGCTGCAATGAAAGATGGCGCGATTGTTTGTA ACTCAGGCCACTTCAATGTTGAAATCGATATTCCAGCCTTGGAAAAAATGGCAGTTGAAAAGAAACAACCACGCCAATTC ATCGATCAATACGTTATGGCCGATGGTCGCCGCATCAACTTGTTGGGCGAAGGCCGCTTGATCAACTTGGCTTCGGCTGA AGGTCACCCAAGCGCCGTAATGGATCAATCATTCGCCAACCAAGCTTTGGCCAGCGAATATCTCTTGACCAACAAAGGCA AGTTGGAAAACAAAGTTTACGCCTTGCCAGTAGAAGTTGACCAAGAAATTGCTCGCTTGAAGCTTGCAGCAATGGGTATC AGCATCGATATCTTGACCGAAGCTCAAGTAACCTACCTCAACTCATGGGAAGAAGGCACCTAG
Upstream 100 bases:
>100_bases CACTCTTAGCTGAATTATTTGGCTAGACTGAATCTGGCAAATTGGGCATTTTTTGCCTTTTGCCTTTTGAATTTTGATTT CTCTATTGAAGGAGTTTTTC
Downstream 100 bases:
>100_bases TCTGATCGATCGTTTGAGGCTAGTTTAGACTAGTTCAACGATCTTATGCTAATGTGACTGAGGCCGAAGTGCATTAACCC GCCTTCGGCTTCAGTATATA
Product: S-adenosyl-L-homocysteine hydrolase
Products: NA
Alternate protein names: S-adenosyl-L-homocysteine hydrolase; AdoHcyase [H]
Number of amino acids: Translated: 420; Mature: 419
Protein sequence:
>420_residues MAKDFDIKDIKLADEGMRRIAWAEQEMPVLRQLRERFSKERPLEGIKMSACLHVTAETANLMRALQAGGADIVLAASNPL STQDDVAAALVQYDEIPVYAIKGEDNATYYNHLKAALDHAPHITMDDGADLVSAVLKDRRELLPNLIGSTEETTTGVIRL RAMANQGVLEFPVIAVNDSQTKHLFDNRYGTGQSTLDGIIRATNVLIAGKTVVVAGYGWCSKGIAMRAHGLGANVIVTEI DSIKALEAAMDGFRVMPMVDAARIGDIFITATGDIHVLDGEDFAAMKDGAIVCNSGHFNVEIDIPALEKMAVEKKQPRQF IDQYVMADGRRINLLGEGRLINLASAEGHPSAVMDQSFANQALASEYLLTNKGKLENKVYALPVEVDQEIARLKLAAMGI SIDILTEAQVTYLNSWEEGT
Sequences:
>Translated_420_residues MAKDFDIKDIKLADEGMRRIAWAEQEMPVLRQLRERFSKERPLEGIKMSACLHVTAETANLMRALQAGGADIVLAASNPL STQDDVAAALVQYDEIPVYAIKGEDNATYYNHLKAALDHAPHITMDDGADLVSAVLKDRRELLPNLIGSTEETTTGVIRL RAMANQGVLEFPVIAVNDSQTKHLFDNRYGTGQSTLDGIIRATNVLIAGKTVVVAGYGWCSKGIAMRAHGLGANVIVTEI DSIKALEAAMDGFRVMPMVDAARIGDIFITATGDIHVLDGEDFAAMKDGAIVCNSGHFNVEIDIPALEKMAVEKKQPRQF IDQYVMADGRRINLLGEGRLINLASAEGHPSAVMDQSFANQALASEYLLTNKGKLENKVYALPVEVDQEIARLKLAAMGI SIDILTEAQVTYLNSWEEGT >Mature_419_residues AKDFDIKDIKLADEGMRRIAWAEQEMPVLRQLRERFSKERPLEGIKMSACLHVTAETANLMRALQAGGADIVLAASNPLS TQDDVAAALVQYDEIPVYAIKGEDNATYYNHLKAALDHAPHITMDDGADLVSAVLKDRRELLPNLIGSTEETTTGVIRLR AMANQGVLEFPVIAVNDSQTKHLFDNRYGTGQSTLDGIIRATNVLIAGKTVVVAGYGWCSKGIAMRAHGLGANVIVTEID SIKALEAAMDGFRVMPMVDAARIGDIFITATGDIHVLDGEDFAAMKDGAIVCNSGHFNVEIDIPALEKMAVEKKQPRQFI DQYVMADGRRINLLGEGRLINLASAEGHPSAVMDQSFANQALASEYLLTNKGKLENKVYALPVEVDQEIARLKLAAMGIS IDILTEAQVTYLNSWEEGT
Specific function: May play a key role in the regulation of the intracellular concentration of adenosylhomocysteine [H]
COG id: COG0499
COG function: function code H; S-adenosylhomocysteine hydrolase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the adenosylhomocysteinase family [H]
Homologues:
Organism=Homo sapiens, GI9951915, Length=412, Percent_Identity=46.3592233009709, Blast_Score=342, Evalue=3e-94, Organism=Homo sapiens, GI239937451, Length=390, Percent_Identity=46.9230769230769, Blast_Score=330, Evalue=2e-90, Organism=Homo sapiens, GI298286489, Length=416, Percent_Identity=40.8653846153846, Blast_Score=291, Evalue=8e-79, Organism=Homo sapiens, GI195539349, Length=416, Percent_Identity=40.8653846153846, Blast_Score=291, Evalue=9e-79, Organism=Homo sapiens, GI195539337, Length=416, Percent_Identity=40.8653846153846, Blast_Score=290, Evalue=2e-78, Organism=Homo sapiens, GI24308043, Length=416, Percent_Identity=40.8653846153846, Blast_Score=290, Evalue=2e-78, Organism=Homo sapiens, GI21361647, Length=416, Percent_Identity=39.9038461538462, Blast_Score=266, Evalue=2e-71, Organism=Caenorhabditis elegans, GI17506425, Length=416, Percent_Identity=43.2692307692308, Blast_Score=322, Evalue=2e-88, Organism=Saccharomyces cerevisiae, GI6320882, Length=437, Percent_Identity=41.6475972540046, Blast_Score=319, Evalue=5e-88, Organism=Drosophila melanogaster, GI24642172, Length=419, Percent_Identity=43.9140811455847, Blast_Score=323, Evalue=2e-88, Organism=Drosophila melanogaster, GI24656245, Length=417, Percent_Identity=38.6091127098321, Blast_Score=266, Evalue=2e-71, Organism=Drosophila melanogaster, GI45553385, Length=413, Percent_Identity=38.9830508474576, Blast_Score=254, Evalue=7e-68, Organism=Drosophila melanogaster, GI45553387, Length=413, Percent_Identity=38.9830508474576, Blast_Score=254, Evalue=8e-68,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000043 - InterPro: IPR015878 - InterPro: IPR020082 [H]
Pfam domain/function: PF05221 AdoHcyase; PF00670 AdoHcyase_NAD [H]
EC number: =3.3.1.1 [H]
Molecular weight: Translated: 45710; Mature: 45579
Theoretical pI: Translated: 4.74; Mature: 4.74
Prosite motif: PS00738 ADOHCYASE_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 3.8 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 3.6 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAKDFDIKDIKLADEGMRRIAWAEQEMPVLRQLRERFSKERPLEGIKMSACLHVTAETAN CCCCCCCCEEEEHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCEEEEEEEEEHHHHH LMRALQAGGADIVLAASNPLSTQDDVAAALVQYDEIPVYAIKGEDNATYYNHLKAALDHA HHHHHHCCCCEEEEECCCCCCCHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHCC PHITMDDGADLVSAVLKDRRELLPNLIGSTEETTTGVIRLRAMANQGVLEFPVIAVNDSQ CEEEECCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHEEEEEECCCCCCEEEEEEEECCCC TKHLFDNRYGTGQSTLDGIIRATNVLIAGKTVVVAGYGWCSKGIAMRAHGLGANVIVTEI HHHHHCCCCCCCHHHHHHHHHHHEEEEECCEEEEEECCCCCCCCEEEECCCCCEEEEEEH DSIKALEAAMDGFRVMPMVDAARIGDIFITATGDIHVLDGEDFAAMKDGAIVCNSGHFNV HHHHHHHHHHCCEEEEEECCHHCCCCEEEEECCCEEEECCCCCEEECCCEEEECCCEEEE EIDIPALEKMAVEKKQPRQFIDQYVMADGRRINLLGEGRLINLASAEGHPSAVMDQSFAN EEECCHHHHHHHHHCCHHHHHHHHHHCCCCEEEEEECCCEEEEECCCCCCCHHHHHHHHH QALASEYLLTNKGKLENKVYALPVEVDQEIARLKLAAMGISIDILTEAQVTYLNSWEEGT HHHHHHHHCCCCCCCCCCEEEEECHHHHHHHHHHHHHCCEEEEEEECCEEEEECCCCCCC >Mature Secondary Structure AKDFDIKDIKLADEGMRRIAWAEQEMPVLRQLRERFSKERPLEGIKMSACLHVTAETAN CCCCCCCEEEEHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCEEEEEEEEEHHHHH LMRALQAGGADIVLAASNPLSTQDDVAAALVQYDEIPVYAIKGEDNATYYNHLKAALDHA HHHHHHCCCCEEEEECCCCCCCHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHCC PHITMDDGADLVSAVLKDRRELLPNLIGSTEETTTGVIRLRAMANQGVLEFPVIAVNDSQ CEEEECCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHEEEEEECCCCCCEEEEEEEECCCC TKHLFDNRYGTGQSTLDGIIRATNVLIAGKTVVVAGYGWCSKGIAMRAHGLGANVIVTEI HHHHHCCCCCCCHHHHHHHHHHHEEEEECCEEEEEECCCCCCCCEEEECCCCCEEEEEEH DSIKALEAAMDGFRVMPMVDAARIGDIFITATGDIHVLDGEDFAAMKDGAIVCNSGHFNV HHHHHHHHHHCCEEEEEECCHHCCCCEEEEECCCEEEECCCCCEEECCCEEEECCCEEEE EIDIPALEKMAVEKKQPRQFIDQYVMADGRRINLLGEGRLINLASAEGHPSAVMDQSFAN EEECCHHHHHHHHHCCHHHHHHHHHHCCCCEEEEEECCCEEEEECCCCCCCHHHHHHHHH QALASEYLLTNKGKLENKVYALPVEVDQEIARLKLAAMGISIDILTEAQVTYLNSWEEGT HHHHHHHHCCCCCCCCCCEEEEECHHHHHHHHHHHHHCCEEEEEEECCEEEEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9537320 [H]