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The map label for this gene is kdpE [H]

Identifier: 159898864

GI number: 159898864

Start: 2990728

End: 2991459

Strand: Reverse

Name: kdpE [H]

Synonym: Haur_2343

Alternate gene names: 159898864

Gene position: 2991459-2990728 (Counterclockwise)

Preceding gene: 159898865

Following gene: 159898860

Centisome position: 47.13

GC content: 50.14

Gene sequence:

>732_bases
GTGGATACGTTCAATGTTGAGCTACGAGATAAGCTCATTCTGGTGGTTGATGATGAACCACGTTTAGTCACATTTATGCG
CGTTAATCTCGAAGCCGAGGGTTGCCGCGTGATTAGCGCCGAAAATGGCCGCAAAGCGCTGGAAAAAGTGCGCGAAGATA
TGCCCGATGCGGTGCTGTTGGATATTATGATGCCTGGCTTGGATGGCTATGAAACCCTGCGCCGCTTACGGGAATTTTCG
TCGATTCCAGTGATTTTTCTGACTGCCAAAGATGAAGAGGATGATCGGATTCGCGGTTTGGAGCTTGGTGCTGATGATTA
TATTGGCAAGCCATTTAGCCATCGCGAGTTGGTCAGCCGCTTGCGGGCAGTGCTGCGTCGCCATTATGTGACCCCAACTC
AAGCGGTTTCGACCACCAAAATCGACGACCGTTTGACCGTCGATTTTGATCGGCGCGAGGTCTTGGTCAATGGTGAACGG
ATCAGCTTGCGGCCAACCGAATACCGCTTGCTCTATCATTTGGTGCAAAATGCTGGCTTTGTGATGCCGCACGAAACCTT
GCTAGCCAAAGTTTGGGGGCCAGAATATCGCGACGAAAGCCATTATTTGCGCTTGTATGTGACCTATCTGCGCCAAAAAA
TCGAAGAAGACCCCGCTAACCCACACTATATCTTAACCGAACGCGGGGTTGGCTATCGCTTTGTTGATTTCAAGAAGAAG
CACGACGAATAA

Upstream 100 bases:

>100_bases
GGCCACGGTTGATGGCACAGTGGTTGCCGAAGGTGGGCTAATGTTTGCAATTGTTGATTAGAAGATTGCCGTAAACATTC
GCCTACAGAAGGAGTCTGTT

Downstream 100 bases:

>100_bases
CGCCTATTTACGCGTAGATGCTCAATGCCGAAATAAGCATTGAGCATTTTTTATTGCTGAGGAGTGATAGATGATCAATT
GCTCCCACTATTGCAATGAT

Product: two component transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 243; Mature: 243

Protein sequence:

>243_residues
MDTFNVELRDKLILVVDDEPRLVTFMRVNLEAEGCRVISAENGRKALEKVREDMPDAVLLDIMMPGLDGYETLRRLREFS
SIPVIFLTAKDEEDDRIRGLELGADDYIGKPFSHRELVSRLRAVLRRHYVTPTQAVSTTKIDDRLTVDFDRREVLVNGER
ISLRPTEYRLLYHLVQNAGFVMPHETLLAKVWGPEYRDESHYLRLYVTYLRQKIEEDPANPHYILTERGVGYRFVDFKKK
HDE

Sequences:

>Translated_243_residues
MDTFNVELRDKLILVVDDEPRLVTFMRVNLEAEGCRVISAENGRKALEKVREDMPDAVLLDIMMPGLDGYETLRRLREFS
SIPVIFLTAKDEEDDRIRGLELGADDYIGKPFSHRELVSRLRAVLRRHYVTPTQAVSTTKIDDRLTVDFDRREVLVNGER
ISLRPTEYRLLYHLVQNAGFVMPHETLLAKVWGPEYRDESHYLRLYVTYLRQKIEEDPANPHYILTERGVGYRFVDFKKK
HDE
>Mature_243_residues
MDTFNVELRDKLILVVDDEPRLVTFMRVNLEAEGCRVISAENGRKALEKVREDMPDAVLLDIMMPGLDGYETLRRLREFS
SIPVIFLTAKDEEDDRIRGLELGADDYIGKPFSHRELVSRLRAVLRRHYVTPTQAVSTTKIDDRLTVDFDRREVLVNGER
ISLRPTEYRLLYHLVQNAGFVMPHETLLAKVWGPEYRDESHYLRLYVTYLRQKIEEDPANPHYILTERGVGYRFVDFKKK
HDE

Specific function: Member of the two-component regulatory system kdpD/kdpE involved in the regulation of the kdp operon [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 response regulatory domain [H]

Homologues:

Organism=Escherichia coli, GI1786911, Length=223, Percent_Identity=45.2914798206278, Blast_Score=195, Evalue=3e-51,
Organism=Escherichia coli, GI87082012, Length=227, Percent_Identity=35.6828193832599, Blast_Score=143, Evalue=1e-35,
Organism=Escherichia coli, GI1786599, Length=225, Percent_Identity=37.3333333333333, Blast_Score=139, Evalue=1e-34,
Organism=Escherichia coli, GI1788394, Length=222, Percent_Identity=37.3873873873874, Blast_Score=139, Evalue=1e-34,
Organism=Escherichia coli, GI1789809, Length=228, Percent_Identity=38.1578947368421, Blast_Score=135, Evalue=3e-33,
Organism=Escherichia coli, GI2367329, Length=227, Percent_Identity=39.647577092511, Blast_Score=132, Evalue=3e-32,
Organism=Escherichia coli, GI1786784, Length=221, Percent_Identity=34.841628959276, Blast_Score=126, Evalue=1e-30,
Organism=Escherichia coli, GI1790863, Length=229, Percent_Identity=34.061135371179, Blast_Score=121, Evalue=4e-29,
Organism=Escherichia coli, GI1787375, Length=223, Percent_Identity=32.7354260089686, Blast_Score=120, Evalue=6e-29,
Organism=Escherichia coli, GI1790552, Length=224, Percent_Identity=33.9285714285714, Blast_Score=114, Evalue=7e-27,
Organism=Escherichia coli, GI1789402, Length=221, Percent_Identity=33.9366515837104, Blast_Score=113, Evalue=1e-26,
Organism=Escherichia coli, GI1790860, Length=223, Percent_Identity=31.8385650224215, Blast_Score=112, Evalue=2e-26,
Organism=Escherichia coli, GI145693140, Length=235, Percent_Identity=30.2127659574468, Blast_Score=97, Evalue=6e-22,
Organism=Escherichia coli, GI1787229, Length=228, Percent_Identity=31.5789473684211, Blast_Score=90, Evalue=1e-19,
Organism=Escherichia coli, GI1790437, Length=131, Percent_Identity=35.8778625954198, Blast_Score=75, Evalue=5e-15,
Organism=Escherichia coli, GI1788550, Length=106, Percent_Identity=38.6792452830189, Blast_Score=71, Evalue=5e-14,
Organism=Escherichia coli, GI1790299, Length=113, Percent_Identity=32.7433628318584, Blast_Score=70, Evalue=2e-13,
Organism=Escherichia coli, GI145693157, Length=105, Percent_Identity=35.2380952380952, Blast_Score=64, Evalue=9e-12,
Organism=Escherichia coli, GI1788713, Length=129, Percent_Identity=33.3333333333333, Blast_Score=64, Evalue=1e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011006
- InterPro:   IPR001867
- InterPro:   IPR001789
- InterPro:   IPR011991 [H]

Pfam domain/function: PF00072 Response_reg; PF00486 Trans_reg_C [H]

EC number: NA

Molecular weight: Translated: 28510; Mature: 28510

Theoretical pI: Translated: 5.94; Mature: 5.94

Prosite motif: PS50110 RESPONSE_REGULATORY

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDTFNVELRDKLILVVDDEPRLVTFMRVNLEAEGCRVISAENGRKALEKVREDMPDAVLL
CCCCEEEEECEEEEEECCCCCEEEEEEEEECCCCEEEEECCCCHHHHHHHHHCCCCCEEH
DIMMPGLDGYETLRRLREFSSIPVIFLTAKDEEDDRIRGLELGADDYIGKPFSHRELVSR
HHHCCCCCHHHHHHHHHHHCCCCEEEEEECCCCCCCEEEEEECCCCCCCCCCCHHHHHHH
LRAVLRRHYVTPTQAVSTTKIDDRLTVDFDRREVLVNGERISLRPTEYRLLYHLVQNAGF
HHHHHHHHCCCCCCCCEEEECCCEEEEEECCCEEEEECCEEEECCHHHHHHHHHHHHCCC
VMPHETLLAKVWGPEYRDESHYLRLYVTYLRQKIEEDPANPHYILTERGVGYRFVDFKKK
CCCHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCEEEEECCCC
HDE
CCC
>Mature Secondary Structure
MDTFNVELRDKLILVVDDEPRLVTFMRVNLEAEGCRVISAENGRKALEKVREDMPDAVLL
CCCCEEEEECEEEEEECCCCCEEEEEEEEECCCCEEEEECCCCHHHHHHHHHCCCCCEEH
DIMMPGLDGYETLRRLREFSSIPVIFLTAKDEEDDRIRGLELGADDYIGKPFSHRELVSR
HHHCCCCCHHHHHHHHHHHCCCCEEEEEECCCCCCCEEEEEECCCCCCCCCCCHHHHHHH
LRAVLRRHYVTPTQAVSTTKIDDRLTVDFDRREVLVNGERISLRPTEYRLLYHLVQNAGF
HHHHHHHHCCCCCCCCEEEECCCEEEEEECCCEEEEECCEEEECCHHHHHHHHHHHHCCC
VMPHETLLAKVWGPEYRDESHYLRLYVTYLRQKIEEDPANPHYILTERGVGYRFVDFKKK
CCCHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCEEEEECCCC
HDE
CCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1532388; 8905232; 9278503 [H]