Definition Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome.
Accession NC_009972
Length 6,346,587

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The map label for this gene is 159898851

Identifier: 159898851

GI number: 159898851

Start: 2973897

End: 2976494

Strand: Reverse

Name: 159898851

Synonym: Haur_2330

Alternate gene names: NA

Gene position: 2976494-2973897 (Counterclockwise)

Preceding gene: 159898860

Following gene: 159898848

Centisome position: 46.9

GC content: 48.92

Gene sequence:

>2598_bases
ATGCAGCCAAGCTTTGTGCAACAACGATTCAGGTCAGTAGTTAGTGCTCTTATCATTTTAACGTTTGGTCTTGGTTCATT
TAGTTGGCTGTTACAATCGGCGTTTGCCAATACGATTGATGCAACACCATATTTAAATCCATTAGCGCCCGATTTTGGCA
TTCAAGCGGCGATTGATGCTGCGGCTGCTCAGGGGGGCGGCACGGTGCGCTTACCCGCTGGTAGCTTTACCCTCGAAACC
TACCTCGATCTTAAAACTGGCGTGACTTTGCAAGGGGTCGGGGCTGAGACGATTTTAAAGGCTGGTCGTAACGAGCAACG
GGTTTTTGTCACGCAAACTGGCAGCAATCTTTCAACAATTAAAGTTGCCAGCGTTACGCCATTTCGAGTTGGTATGATCG
TCTATGTCTGGCGTTCGACAGAATTGCGCTTCTTGCCTGGCTCCTATGAAATTATGAGCATCAATAGTACTAATCAAACG
ATCACGCTTGATCGCGCGGTCAATTACCCGCTGACTGCTAATGTTTCGCAAGTGTCGTATGGTTTGTACACCAAATTGAC
CGGTGCTGCCACCCAAGGAACCAATGTGATCAGCGTGGCCGATACCAGCGTGTTCAATCCAGGCGAAGGCATCATTATTA
AAGGAACTGAAGGTACAGGCATTGGCAATTGGGGTGTTGAGCAAAATATGGTCGATTCGATCAATACCAGCAACAACACG
CTGACCCTCAAAAAGCCTTTGACGCTTTCAGTGCCCAATAACTCAGTCGTATCGCACGCCTATTCGGCGATTTTTGCGCT
TGGAACCAATTTCAACAATCGCTTGCAAAATATGGGTGTACGCGATTTGACGATTGAGGGCTGGAACACCAACCAAAAGC
CGGCCTTCTATGAGTTTTATATTGGAGCGATTAACTTTGTCTATTGCCGCTTTGTGACGATCGATAACATCACCGTGCGC
TATTGGCATAGCGATGGCGTAAGCTTGCAATCGTGTGATCAAAGCACGGTCAGCAATAGTCTGGCAACTGCTAATCGTGG
CCATGGCTTCCATCCAGGTACTGCTTCACGCGATATTGAATTTTTCAAAATTCAAGGGATTGGCAATTTGGGCTATGCAG
CACGTGGGACTGCTGGCGATGGTTTGTACTATTGTTGGGCTAACCAACGAGTTAATATTCGCCAGAGCGTTTTCCGTAAT
AATGCTGGCTCAGGCGTTGGCGATTTAGGTGGTGGCGATACCGATAATTCCTCACGTGATACCGATAACATCATTGAAGA
TAGCATTATGGAAGGCAATTTCCGCGCTGGGATTGAGGTTAATGGTGGTGGCAATACGGCCAATAACATTATTCGCCGCA
ACGTGATTCGCAATAACAACACTGGCAATCAAGATTATGCTGGCATTAACTTGCTTTCCAAGCGCGGCCCAGTCCAACGC
TATATCATCCAAGATAATATTGTTGAAAACACAGCGGGCAGTAACCAACTCTTTGGGATTCGTGAGGTCAACTTGGCTGT
GCCACCCACCACCCCAGTTGATTATCTGACCGATTTCAACACGATCACCAATAACACGATTTATAACCACCCAAGCAATA
ATTTGGTAGTGATTGGCCCCAACACCGTCGCCACTGGCAATATTTTCACTGCACCAGGCGCGGTGATCACACCAACGCCA
ACCAATATTCAACCAACTGCGACTGCTACAATCGCGCCAACCAACACTCCAACCCCAACTGGTTCGTATGTGCCACGCTT
GATTATGTACAATGCCGATACTGATCAAGTTATGTATGATCCAATTCCCAATGGCGTGACAATTAATTATGCGACGCTGG
GAACCCGTAATATCAGCATTGTTGCTCCAACCGCGCCTTCGAGCGGGATTGGCAGCGTGCGTTTTTGGGTTGATAGCGTG
GTTTATCGCACCGAAAGTGGTCGGCCTTATTCAATCGCTGGCGATCAAACCAATGGTACAGATTTCTTGCCGATGAATCC
GGCCTTGGCCCATGGAACCCATGTGATCAAAGCAGCCACCTACACAGGTTCAGGTGGAACTGGCACACAAGGCACACCCT
ATCAAATTGTGATTAATATTGTTGATAGTAATGCCACGGCTACGCCAATTCCAACCAACACCAATACCCCTGTACCAACT
GTACCAACCGCGACCGCAACTGCAACGAACACGCCAACCAACACGCCGACCAATACGGCAACCAACACGCCAACGGCAAC
AGCAATTGCAACCGCGACTAATACGCCAACTGAGATTGCAACGCCCACGGCCACGGTAACGGAAGTGGCGACGGCCACAC
CAACCGAAATCGCCACGATCACCGCAACCGCGACTGACGTTGCCACGGTCACTGCGACAGAAATTGCTACAGCTACGGCG
ACAGCGACGATTACGGCAACATTAACGAACACACCAACCAATACACCGACTAATACTGCAACTGCAACGCTGACTGAGAC
ACCTACGGCGACGCTTGAGCCAAGTGTTACACCAAGCAATACACCAACGGCGACAACCACGGTTACGACTCCAGTGCCGT
CAACCCATCATGTTTATGCGCCATGGGTTACCAACTAA

Upstream 100 bases:

>100_bases
CTTCCCAGTTTGATTAAAGGCTCAGAGAACTCGGTGCATGGGGGCTATTGAAAGGCTCCTTTTTTATTGTTCAGCACCAA
GGTTCACGCGCGGAGGGACT

Downstream 100 bases:

>100_bases
AAGTAGGGGGTTTGTTAATCCAACAATGGGAGCTGAGCGGCAGGGGAAGGTTTTTAAGCTATGATGGGCATGAGGATCGG
GGGCCATGCTGTGCTTGGGC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 865; Mature: 865

Protein sequence:

>865_residues
MQPSFVQQRFRSVVSALIILTFGLGSFSWLLQSAFANTIDATPYLNPLAPDFGIQAAIDAAAAQGGGTVRLPAGSFTLET
YLDLKTGVTLQGVGAETILKAGRNEQRVFVTQTGSNLSTIKVASVTPFRVGMIVYVWRSTELRFLPGSYEIMSINSTNQT
ITLDRAVNYPLTANVSQVSYGLYTKLTGAATQGTNVISVADTSVFNPGEGIIIKGTEGTGIGNWGVEQNMVDSINTSNNT
LTLKKPLTLSVPNNSVVSHAYSAIFALGTNFNNRLQNMGVRDLTIEGWNTNQKPAFYEFYIGAINFVYCRFVTIDNITVR
YWHSDGVSLQSCDQSTVSNSLATANRGHGFHPGTASRDIEFFKIQGIGNLGYAARGTAGDGLYYCWANQRVNIRQSVFRN
NAGSGVGDLGGGDTDNSSRDTDNIIEDSIMEGNFRAGIEVNGGGNTANNIIRRNVIRNNNTGNQDYAGINLLSKRGPVQR
YIIQDNIVENTAGSNQLFGIREVNLAVPPTTPVDYLTDFNTITNNTIYNHPSNNLVVIGPNTVATGNIFTAPGAVITPTP
TNIQPTATATIAPTNTPTPTGSYVPRLIMYNADTDQVMYDPIPNGVTINYATLGTRNISIVAPTAPSSGIGSVRFWVDSV
VYRTESGRPYSIAGDQTNGTDFLPMNPALAHGTHVIKAATYTGSGGTGTQGTPYQIVINIVDSNATATPIPTNTNTPVPT
VPTATATATNTPTNTPTNTATNTPTATAIATATNTPTEIATPTATVTEVATATPTEIATITATATDVATVTATEIATATA
TATITATLTNTPTNTPTNTATATLTETPTATLEPSVTPSNTPTATTTVTTPVPSTHHVYAPWVTN

Sequences:

>Translated_865_residues
MQPSFVQQRFRSVVSALIILTFGLGSFSWLLQSAFANTIDATPYLNPLAPDFGIQAAIDAAAAQGGGTVRLPAGSFTLET
YLDLKTGVTLQGVGAETILKAGRNEQRVFVTQTGSNLSTIKVASVTPFRVGMIVYVWRSTELRFLPGSYEIMSINSTNQT
ITLDRAVNYPLTANVSQVSYGLYTKLTGAATQGTNVISVADTSVFNPGEGIIIKGTEGTGIGNWGVEQNMVDSINTSNNT
LTLKKPLTLSVPNNSVVSHAYSAIFALGTNFNNRLQNMGVRDLTIEGWNTNQKPAFYEFYIGAINFVYCRFVTIDNITVR
YWHSDGVSLQSCDQSTVSNSLATANRGHGFHPGTASRDIEFFKIQGIGNLGYAARGTAGDGLYYCWANQRVNIRQSVFRN
NAGSGVGDLGGGDTDNSSRDTDNIIEDSIMEGNFRAGIEVNGGGNTANNIIRRNVIRNNNTGNQDYAGINLLSKRGPVQR
YIIQDNIVENTAGSNQLFGIREVNLAVPPTTPVDYLTDFNTITNNTIYNHPSNNLVVIGPNTVATGNIFTAPGAVITPTP
TNIQPTATATIAPTNTPTPTGSYVPRLIMYNADTDQVMYDPIPNGVTINYATLGTRNISIVAPTAPSSGIGSVRFWVDSV
VYRTESGRPYSIAGDQTNGTDFLPMNPALAHGTHVIKAATYTGSGGTGTQGTPYQIVINIVDSNATATPIPTNTNTPVPT
VPTATATATNTPTNTPTNTATNTPTATAIATATNTPTEIATPTATVTEVATATPTEIATITATATDVATVTATEIATATA
TATITATLTNTPTNTPTNTATATLTETPTATLEPSVTPSNTPTATTTVTTPVPSTHHVYAPWVTN
>Mature_865_residues
MQPSFVQQRFRSVVSALIILTFGLGSFSWLLQSAFANTIDATPYLNPLAPDFGIQAAIDAAAAQGGGTVRLPAGSFTLET
YLDLKTGVTLQGVGAETILKAGRNEQRVFVTQTGSNLSTIKVASVTPFRVGMIVYVWRSTELRFLPGSYEIMSINSTNQT
ITLDRAVNYPLTANVSQVSYGLYTKLTGAATQGTNVISVADTSVFNPGEGIIIKGTEGTGIGNWGVEQNMVDSINTSNNT
LTLKKPLTLSVPNNSVVSHAYSAIFALGTNFNNRLQNMGVRDLTIEGWNTNQKPAFYEFYIGAINFVYCRFVTIDNITVR
YWHSDGVSLQSCDQSTVSNSLATANRGHGFHPGTASRDIEFFKIQGIGNLGYAARGTAGDGLYYCWANQRVNIRQSVFRN
NAGSGVGDLGGGDTDNSSRDTDNIIEDSIMEGNFRAGIEVNGGGNTANNIIRRNVIRNNNTGNQDYAGINLLSKRGPVQR
YIIQDNIVENTAGSNQLFGIREVNLAVPPTTPVDYLTDFNTITNNTIYNHPSNNLVVIGPNTVATGNIFTAPGAVITPTP
TNIQPTATATIAPTNTPTPTGSYVPRLIMYNADTDQVMYDPIPNGVTINYATLGTRNISIVAPTAPSSGIGSVRFWVDSV
VYRTESGRPYSIAGDQTNGTDFLPMNPALAHGTHVIKAATYTGSGGTGTQGTPYQIVINIVDSNATATPIPTNTNTPVPT
VPTATATATNTPTNTPTNTATNTPTATAIATATNTPTEIATPTATVTEVATATPTEIATITATATDVATVTATEIATATA
TATITATLTNTPTNTPTNTATATLTETPTATLEPSVTPSNTPTATTTVTTPVPSTHHVYAPWVTN

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 91332; Mature: 91332

Theoretical pI: Translated: 5.31; Mature: 5.31

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
1.4 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
1.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQPSFVQQRFRSVVSALIILTFGLGSFSWLLQSAFANTIDATPYLNPLAPDFGIQAAIDA
CCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHH
AAAQGGGTVRLPAGSFTLETYLDLKTGVTLQGVGAETILKAGRNEQRVFVTQTGSNLSTI
HHCCCCCEEEECCCCEEEEEEEEHHCCEEEECCCHHHHHHCCCCCCEEEEEECCCCEEEE
KVASVTPFRVGMIVYVWRSTELRFLPGSYEIMSINSTNQTITLDRAVNYPLTANVSQVSY
EEEEECCEEEEEEEEEEECCEEEECCCCEEEEEECCCCCEEEEEEECCCCEECCHHHHCC
GLYTKLTGAATQGTNVISVADTSVFNPGEGIIIKGTEGTGIGNWGVEQNMVDSINTSNNT
CEEEEEECCCCCCCEEEEEECCCEECCCCCEEEECCCCCCCCCCCCCCCHHHHCCCCCCE
LTLKKPLTLSVPNNSVVSHAYSAIFALGTNFNNRLQNMGVRDLTIEGWNTNQKPAFYEFY
EEEECCEEEECCCCHHHHHHHHEEEEECCCHHHHHHHCCCEEEEEECCCCCCCCEEEEEE
IGAINFVYCRFVTIDNITVRYWHSDGVSLQSCDQSTVSNSLATANRGHGFHPGTASRDIE
EHHEEEEEEEEEEECCEEEEEEECCCCCHHHCCHHHHHHHHHCCCCCCCCCCCCCCCCEE
FFKIQGIGNLGYAARGTAGDGLYYCWANQRVNIRQSVFRNNAGSGVGDLGGGDTDNSSRD
EEEEECCCCCCCEECCCCCCCEEEEEECCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCC
TDNIIEDSIMEGNFRAGIEVNGGGNTANNIIRRNVIRNNNTGNQDYAGINLLSKRGPVQR
CHHHHHHHHHCCCEEEEEEECCCCCHHHHHHHHHHHCCCCCCCCCCCCEEEECCCCCEEE
YIIQDNIVENTAGSNQLFGIREVNLAVPPTTPVDYLTDFNTITNNTIYNHPSNNLVVIGP
EEEECCCCCCCCCCCEEEEEEEEEEECCCCCCHHHHHCCCCCCCCEEEECCCCCEEEECC
NTVATGNIFTAPGAVITPTPTNIQPTATATIAPTNTPTPTGSYVPRLIMYNADTDQVMYD
CCEECCCEEECCCCEECCCCCCCCCCEEEEEECCCCCCCCCCCCCEEEEEECCCCCEEEC
PIPNGVTINYATLGTRNISIVAPTAPSSGIGSVRFWVDSVVYRTESGRPYSIAGDQTNGT
CCCCCEEEEEEEECCCEEEEEECCCCCCCCCEEHEEEEEEEEECCCCCEEEEECCCCCCC
DFLPMNPALAHGTHVIKAATYTGSGGTGTQGTPYQIVINIVDSNATATPIPTNTNTPVPT
EEEECCCHHHCCCEEEEEEEEECCCCCCCCCCCEEEEEEEECCCCCCCCCCCCCCCCCCC
VPTATATATNTPTNTPTNTATNTPTATAIATATNTPTEIATPTATVTEVATATPTEIATI
CCCCCEECCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCHHHHHCCCCCCEEEEE
TATATDVATVTATEIATATATATITATLTNTPTNTPTNTATATLTETPTATLEPSVTPSN
EEECCCEEEEEHHHHEEEEEEEEEEEEEECCCCCCCCCCEEEEEECCCCCEECCCCCCCC
TPTATTTVTTPVPSTHHVYAPWVTN
CCCEEEEEECCCCCCCEEECCCCCC
>Mature Secondary Structure
MQPSFVQQRFRSVVSALIILTFGLGSFSWLLQSAFANTIDATPYLNPLAPDFGIQAAIDA
CCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHH
AAAQGGGTVRLPAGSFTLETYLDLKTGVTLQGVGAETILKAGRNEQRVFVTQTGSNLSTI
HHCCCCCEEEECCCCEEEEEEEEHHCCEEEECCCHHHHHHCCCCCCEEEEEECCCCEEEE
KVASVTPFRVGMIVYVWRSTELRFLPGSYEIMSINSTNQTITLDRAVNYPLTANVSQVSY
EEEEECCEEEEEEEEEEECCEEEECCCCEEEEEECCCCCEEEEEEECCCCEECCHHHHCC
GLYTKLTGAATQGTNVISVADTSVFNPGEGIIIKGTEGTGIGNWGVEQNMVDSINTSNNT
CEEEEEECCCCCCCEEEEEECCCEECCCCCEEEECCCCCCCCCCCCCCCHHHHCCCCCCE
LTLKKPLTLSVPNNSVVSHAYSAIFALGTNFNNRLQNMGVRDLTIEGWNTNQKPAFYEFY
EEEECCEEEECCCCHHHHHHHHEEEEECCCHHHHHHHCCCEEEEEECCCCCCCCEEEEEE
IGAINFVYCRFVTIDNITVRYWHSDGVSLQSCDQSTVSNSLATANRGHGFHPGTASRDIE
EHHEEEEEEEEEEECCEEEEEEECCCCCHHHCCHHHHHHHHHCCCCCCCCCCCCCCCCEE
FFKIQGIGNLGYAARGTAGDGLYYCWANQRVNIRQSVFRNNAGSGVGDLGGGDTDNSSRD
EEEEECCCCCCCEECCCCCCCEEEEEECCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCC
TDNIIEDSIMEGNFRAGIEVNGGGNTANNIIRRNVIRNNNTGNQDYAGINLLSKRGPVQR
CHHHHHHHHHCCCEEEEEEECCCCCHHHHHHHHHHHCCCCCCCCCCCCEEEECCCCCEEE
YIIQDNIVENTAGSNQLFGIREVNLAVPPTTPVDYLTDFNTITNNTIYNHPSNNLVVIGP
EEEECCCCCCCCCCCEEEEEEEEEEECCCCCCHHHHHCCCCCCCCEEEECCCCCEEEECC
NTVATGNIFTAPGAVITPTPTNIQPTATATIAPTNTPTPTGSYVPRLIMYNADTDQVMYD
CCEECCCEEECCCCEECCCCCCCCCCEEEEEECCCCCCCCCCCCCEEEEEECCCCCEEEC
PIPNGVTINYATLGTRNISIVAPTAPSSGIGSVRFWVDSVVYRTESGRPYSIAGDQTNGT
CCCCCEEEEEEEECCCEEEEEECCCCCCCCCEEHEEEEEEEEECCCCCEEEEECCCCCCC
DFLPMNPALAHGTHVIKAATYTGSGGTGTQGTPYQIVINIVDSNATATPIPTNTNTPVPT
EEEECCCHHHCCCEEEEEEEEECCCCCCCCCCCEEEEEEEECCCCCCCCCCCCCCCCCCC
VPTATATATNTPTNTPTNTATNTPTATAIATATNTPTEIATPTATVTEVATATPTEIATI
CCCCCEECCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCHHHHHCCCCCCEEEEE
TATATDVATVTATEIATATATATITATLTNTPTNTPTNTATATLTETPTATLEPSVTPSN
EEECCCEEEEEHHHHEEEEEEEEEEEEEECCCCCCCCCCEEEEEECCCCCEECCCCCCCC
TPTATTTVTTPVPSTHHVYAPWVTN
CCCEEEEEECCCCCCCEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA