| Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
|---|---|
| Accession | NC_009972 |
| Length | 6,346,587 |
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The map label for this gene is 159898851
Identifier: 159898851
GI number: 159898851
Start: 2973897
End: 2976494
Strand: Reverse
Name: 159898851
Synonym: Haur_2330
Alternate gene names: NA
Gene position: 2976494-2973897 (Counterclockwise)
Preceding gene: 159898860
Following gene: 159898848
Centisome position: 46.9
GC content: 48.92
Gene sequence:
>2598_bases ATGCAGCCAAGCTTTGTGCAACAACGATTCAGGTCAGTAGTTAGTGCTCTTATCATTTTAACGTTTGGTCTTGGTTCATT TAGTTGGCTGTTACAATCGGCGTTTGCCAATACGATTGATGCAACACCATATTTAAATCCATTAGCGCCCGATTTTGGCA TTCAAGCGGCGATTGATGCTGCGGCTGCTCAGGGGGGCGGCACGGTGCGCTTACCCGCTGGTAGCTTTACCCTCGAAACC TACCTCGATCTTAAAACTGGCGTGACTTTGCAAGGGGTCGGGGCTGAGACGATTTTAAAGGCTGGTCGTAACGAGCAACG GGTTTTTGTCACGCAAACTGGCAGCAATCTTTCAACAATTAAAGTTGCCAGCGTTACGCCATTTCGAGTTGGTATGATCG TCTATGTCTGGCGTTCGACAGAATTGCGCTTCTTGCCTGGCTCCTATGAAATTATGAGCATCAATAGTACTAATCAAACG ATCACGCTTGATCGCGCGGTCAATTACCCGCTGACTGCTAATGTTTCGCAAGTGTCGTATGGTTTGTACACCAAATTGAC CGGTGCTGCCACCCAAGGAACCAATGTGATCAGCGTGGCCGATACCAGCGTGTTCAATCCAGGCGAAGGCATCATTATTA AAGGAACTGAAGGTACAGGCATTGGCAATTGGGGTGTTGAGCAAAATATGGTCGATTCGATCAATACCAGCAACAACACG CTGACCCTCAAAAAGCCTTTGACGCTTTCAGTGCCCAATAACTCAGTCGTATCGCACGCCTATTCGGCGATTTTTGCGCT TGGAACCAATTTCAACAATCGCTTGCAAAATATGGGTGTACGCGATTTGACGATTGAGGGCTGGAACACCAACCAAAAGC CGGCCTTCTATGAGTTTTATATTGGAGCGATTAACTTTGTCTATTGCCGCTTTGTGACGATCGATAACATCACCGTGCGC TATTGGCATAGCGATGGCGTAAGCTTGCAATCGTGTGATCAAAGCACGGTCAGCAATAGTCTGGCAACTGCTAATCGTGG CCATGGCTTCCATCCAGGTACTGCTTCACGCGATATTGAATTTTTCAAAATTCAAGGGATTGGCAATTTGGGCTATGCAG CACGTGGGACTGCTGGCGATGGTTTGTACTATTGTTGGGCTAACCAACGAGTTAATATTCGCCAGAGCGTTTTCCGTAAT AATGCTGGCTCAGGCGTTGGCGATTTAGGTGGTGGCGATACCGATAATTCCTCACGTGATACCGATAACATCATTGAAGA TAGCATTATGGAAGGCAATTTCCGCGCTGGGATTGAGGTTAATGGTGGTGGCAATACGGCCAATAACATTATTCGCCGCA ACGTGATTCGCAATAACAACACTGGCAATCAAGATTATGCTGGCATTAACTTGCTTTCCAAGCGCGGCCCAGTCCAACGC TATATCATCCAAGATAATATTGTTGAAAACACAGCGGGCAGTAACCAACTCTTTGGGATTCGTGAGGTCAACTTGGCTGT GCCACCCACCACCCCAGTTGATTATCTGACCGATTTCAACACGATCACCAATAACACGATTTATAACCACCCAAGCAATA ATTTGGTAGTGATTGGCCCCAACACCGTCGCCACTGGCAATATTTTCACTGCACCAGGCGCGGTGATCACACCAACGCCA ACCAATATTCAACCAACTGCGACTGCTACAATCGCGCCAACCAACACTCCAACCCCAACTGGTTCGTATGTGCCACGCTT GATTATGTACAATGCCGATACTGATCAAGTTATGTATGATCCAATTCCCAATGGCGTGACAATTAATTATGCGACGCTGG GAACCCGTAATATCAGCATTGTTGCTCCAACCGCGCCTTCGAGCGGGATTGGCAGCGTGCGTTTTTGGGTTGATAGCGTG GTTTATCGCACCGAAAGTGGTCGGCCTTATTCAATCGCTGGCGATCAAACCAATGGTACAGATTTCTTGCCGATGAATCC GGCCTTGGCCCATGGAACCCATGTGATCAAAGCAGCCACCTACACAGGTTCAGGTGGAACTGGCACACAAGGCACACCCT ATCAAATTGTGATTAATATTGTTGATAGTAATGCCACGGCTACGCCAATTCCAACCAACACCAATACCCCTGTACCAACT GTACCAACCGCGACCGCAACTGCAACGAACACGCCAACCAACACGCCGACCAATACGGCAACCAACACGCCAACGGCAAC AGCAATTGCAACCGCGACTAATACGCCAACTGAGATTGCAACGCCCACGGCCACGGTAACGGAAGTGGCGACGGCCACAC CAACCGAAATCGCCACGATCACCGCAACCGCGACTGACGTTGCCACGGTCACTGCGACAGAAATTGCTACAGCTACGGCG ACAGCGACGATTACGGCAACATTAACGAACACACCAACCAATACACCGACTAATACTGCAACTGCAACGCTGACTGAGAC ACCTACGGCGACGCTTGAGCCAAGTGTTACACCAAGCAATACACCAACGGCGACAACCACGGTTACGACTCCAGTGCCGT CAACCCATCATGTTTATGCGCCATGGGTTACCAACTAA
Upstream 100 bases:
>100_bases CTTCCCAGTTTGATTAAAGGCTCAGAGAACTCGGTGCATGGGGGCTATTGAAAGGCTCCTTTTTTATTGTTCAGCACCAA GGTTCACGCGCGGAGGGACT
Downstream 100 bases:
>100_bases AAGTAGGGGGTTTGTTAATCCAACAATGGGAGCTGAGCGGCAGGGGAAGGTTTTTAAGCTATGATGGGCATGAGGATCGG GGGCCATGCTGTGCTTGGGC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 865; Mature: 865
Protein sequence:
>865_residues MQPSFVQQRFRSVVSALIILTFGLGSFSWLLQSAFANTIDATPYLNPLAPDFGIQAAIDAAAAQGGGTVRLPAGSFTLET YLDLKTGVTLQGVGAETILKAGRNEQRVFVTQTGSNLSTIKVASVTPFRVGMIVYVWRSTELRFLPGSYEIMSINSTNQT ITLDRAVNYPLTANVSQVSYGLYTKLTGAATQGTNVISVADTSVFNPGEGIIIKGTEGTGIGNWGVEQNMVDSINTSNNT LTLKKPLTLSVPNNSVVSHAYSAIFALGTNFNNRLQNMGVRDLTIEGWNTNQKPAFYEFYIGAINFVYCRFVTIDNITVR YWHSDGVSLQSCDQSTVSNSLATANRGHGFHPGTASRDIEFFKIQGIGNLGYAARGTAGDGLYYCWANQRVNIRQSVFRN NAGSGVGDLGGGDTDNSSRDTDNIIEDSIMEGNFRAGIEVNGGGNTANNIIRRNVIRNNNTGNQDYAGINLLSKRGPVQR YIIQDNIVENTAGSNQLFGIREVNLAVPPTTPVDYLTDFNTITNNTIYNHPSNNLVVIGPNTVATGNIFTAPGAVITPTP TNIQPTATATIAPTNTPTPTGSYVPRLIMYNADTDQVMYDPIPNGVTINYATLGTRNISIVAPTAPSSGIGSVRFWVDSV VYRTESGRPYSIAGDQTNGTDFLPMNPALAHGTHVIKAATYTGSGGTGTQGTPYQIVINIVDSNATATPIPTNTNTPVPT VPTATATATNTPTNTPTNTATNTPTATAIATATNTPTEIATPTATVTEVATATPTEIATITATATDVATVTATEIATATA TATITATLTNTPTNTPTNTATATLTETPTATLEPSVTPSNTPTATTTVTTPVPSTHHVYAPWVTN
Sequences:
>Translated_865_residues MQPSFVQQRFRSVVSALIILTFGLGSFSWLLQSAFANTIDATPYLNPLAPDFGIQAAIDAAAAQGGGTVRLPAGSFTLET YLDLKTGVTLQGVGAETILKAGRNEQRVFVTQTGSNLSTIKVASVTPFRVGMIVYVWRSTELRFLPGSYEIMSINSTNQT ITLDRAVNYPLTANVSQVSYGLYTKLTGAATQGTNVISVADTSVFNPGEGIIIKGTEGTGIGNWGVEQNMVDSINTSNNT LTLKKPLTLSVPNNSVVSHAYSAIFALGTNFNNRLQNMGVRDLTIEGWNTNQKPAFYEFYIGAINFVYCRFVTIDNITVR YWHSDGVSLQSCDQSTVSNSLATANRGHGFHPGTASRDIEFFKIQGIGNLGYAARGTAGDGLYYCWANQRVNIRQSVFRN NAGSGVGDLGGGDTDNSSRDTDNIIEDSIMEGNFRAGIEVNGGGNTANNIIRRNVIRNNNTGNQDYAGINLLSKRGPVQR YIIQDNIVENTAGSNQLFGIREVNLAVPPTTPVDYLTDFNTITNNTIYNHPSNNLVVIGPNTVATGNIFTAPGAVITPTP TNIQPTATATIAPTNTPTPTGSYVPRLIMYNADTDQVMYDPIPNGVTINYATLGTRNISIVAPTAPSSGIGSVRFWVDSV VYRTESGRPYSIAGDQTNGTDFLPMNPALAHGTHVIKAATYTGSGGTGTQGTPYQIVINIVDSNATATPIPTNTNTPVPT VPTATATATNTPTNTPTNTATNTPTATAIATATNTPTEIATPTATVTEVATATPTEIATITATATDVATVTATEIATATA TATITATLTNTPTNTPTNTATATLTETPTATLEPSVTPSNTPTATTTVTTPVPSTHHVYAPWVTN >Mature_865_residues MQPSFVQQRFRSVVSALIILTFGLGSFSWLLQSAFANTIDATPYLNPLAPDFGIQAAIDAAAAQGGGTVRLPAGSFTLET YLDLKTGVTLQGVGAETILKAGRNEQRVFVTQTGSNLSTIKVASVTPFRVGMIVYVWRSTELRFLPGSYEIMSINSTNQT ITLDRAVNYPLTANVSQVSYGLYTKLTGAATQGTNVISVADTSVFNPGEGIIIKGTEGTGIGNWGVEQNMVDSINTSNNT LTLKKPLTLSVPNNSVVSHAYSAIFALGTNFNNRLQNMGVRDLTIEGWNTNQKPAFYEFYIGAINFVYCRFVTIDNITVR YWHSDGVSLQSCDQSTVSNSLATANRGHGFHPGTASRDIEFFKIQGIGNLGYAARGTAGDGLYYCWANQRVNIRQSVFRN NAGSGVGDLGGGDTDNSSRDTDNIIEDSIMEGNFRAGIEVNGGGNTANNIIRRNVIRNNNTGNQDYAGINLLSKRGPVQR YIIQDNIVENTAGSNQLFGIREVNLAVPPTTPVDYLTDFNTITNNTIYNHPSNNLVVIGPNTVATGNIFTAPGAVITPTP TNIQPTATATIAPTNTPTPTGSYVPRLIMYNADTDQVMYDPIPNGVTINYATLGTRNISIVAPTAPSSGIGSVRFWVDSV VYRTESGRPYSIAGDQTNGTDFLPMNPALAHGTHVIKAATYTGSGGTGTQGTPYQIVINIVDSNATATPIPTNTNTPVPT VPTATATATNTPTNTPTNTATNTPTATAIATATNTPTEIATPTATVTEVATATPTEIATITATATDVATVTATEIATATA TATITATLTNTPTNTPTNTATATLTETPTATLEPSVTPSNTPTATTTVTTPVPSTHHVYAPWVTN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 91332; Mature: 91332
Theoretical pI: Translated: 5.31; Mature: 5.31
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 1.4 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 1.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQPSFVQQRFRSVVSALIILTFGLGSFSWLLQSAFANTIDATPYLNPLAPDFGIQAAIDA CCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHH AAAQGGGTVRLPAGSFTLETYLDLKTGVTLQGVGAETILKAGRNEQRVFVTQTGSNLSTI HHCCCCCEEEECCCCEEEEEEEEHHCCEEEECCCHHHHHHCCCCCCEEEEEECCCCEEEE KVASVTPFRVGMIVYVWRSTELRFLPGSYEIMSINSTNQTITLDRAVNYPLTANVSQVSY EEEEECCEEEEEEEEEEECCEEEECCCCEEEEEECCCCCEEEEEEECCCCEECCHHHHCC GLYTKLTGAATQGTNVISVADTSVFNPGEGIIIKGTEGTGIGNWGVEQNMVDSINTSNNT CEEEEEECCCCCCCEEEEEECCCEECCCCCEEEECCCCCCCCCCCCCCCHHHHCCCCCCE LTLKKPLTLSVPNNSVVSHAYSAIFALGTNFNNRLQNMGVRDLTIEGWNTNQKPAFYEFY EEEECCEEEECCCCHHHHHHHHEEEEECCCHHHHHHHCCCEEEEEECCCCCCCCEEEEEE IGAINFVYCRFVTIDNITVRYWHSDGVSLQSCDQSTVSNSLATANRGHGFHPGTASRDIE EHHEEEEEEEEEEECCEEEEEEECCCCCHHHCCHHHHHHHHHCCCCCCCCCCCCCCCCEE FFKIQGIGNLGYAARGTAGDGLYYCWANQRVNIRQSVFRNNAGSGVGDLGGGDTDNSSRD EEEEECCCCCCCEECCCCCCCEEEEEECCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCC TDNIIEDSIMEGNFRAGIEVNGGGNTANNIIRRNVIRNNNTGNQDYAGINLLSKRGPVQR CHHHHHHHHHCCCEEEEEEECCCCCHHHHHHHHHHHCCCCCCCCCCCCEEEECCCCCEEE YIIQDNIVENTAGSNQLFGIREVNLAVPPTTPVDYLTDFNTITNNTIYNHPSNNLVVIGP EEEECCCCCCCCCCCEEEEEEEEEEECCCCCCHHHHHCCCCCCCCEEEECCCCCEEEECC NTVATGNIFTAPGAVITPTPTNIQPTATATIAPTNTPTPTGSYVPRLIMYNADTDQVMYD CCEECCCEEECCCCEECCCCCCCCCCEEEEEECCCCCCCCCCCCCEEEEEECCCCCEEEC PIPNGVTINYATLGTRNISIVAPTAPSSGIGSVRFWVDSVVYRTESGRPYSIAGDQTNGT CCCCCEEEEEEEECCCEEEEEECCCCCCCCCEEHEEEEEEEEECCCCCEEEEECCCCCCC DFLPMNPALAHGTHVIKAATYTGSGGTGTQGTPYQIVINIVDSNATATPIPTNTNTPVPT EEEECCCHHHCCCEEEEEEEEECCCCCCCCCCCEEEEEEEECCCCCCCCCCCCCCCCCCC VPTATATATNTPTNTPTNTATNTPTATAIATATNTPTEIATPTATVTEVATATPTEIATI CCCCCEECCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCHHHHHCCCCCCEEEEE TATATDVATVTATEIATATATATITATLTNTPTNTPTNTATATLTETPTATLEPSVTPSN EEECCCEEEEEHHHHEEEEEEEEEEEEEECCCCCCCCCCEEEEEECCCCCEECCCCCCCC TPTATTTVTTPVPSTHHVYAPWVTN CCCEEEEEECCCCCCCEEECCCCCC >Mature Secondary Structure MQPSFVQQRFRSVVSALIILTFGLGSFSWLLQSAFANTIDATPYLNPLAPDFGIQAAIDA CCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHH AAAQGGGTVRLPAGSFTLETYLDLKTGVTLQGVGAETILKAGRNEQRVFVTQTGSNLSTI HHCCCCCEEEECCCCEEEEEEEEHHCCEEEECCCHHHHHHCCCCCCEEEEEECCCCEEEE KVASVTPFRVGMIVYVWRSTELRFLPGSYEIMSINSTNQTITLDRAVNYPLTANVSQVSY EEEEECCEEEEEEEEEEECCEEEECCCCEEEEEECCCCCEEEEEEECCCCEECCHHHHCC GLYTKLTGAATQGTNVISVADTSVFNPGEGIIIKGTEGTGIGNWGVEQNMVDSINTSNNT CEEEEEECCCCCCCEEEEEECCCEECCCCCEEEECCCCCCCCCCCCCCCHHHHCCCCCCE LTLKKPLTLSVPNNSVVSHAYSAIFALGTNFNNRLQNMGVRDLTIEGWNTNQKPAFYEFY EEEECCEEEECCCCHHHHHHHHEEEEECCCHHHHHHHCCCEEEEEECCCCCCCCEEEEEE IGAINFVYCRFVTIDNITVRYWHSDGVSLQSCDQSTVSNSLATANRGHGFHPGTASRDIE EHHEEEEEEEEEEECCEEEEEEECCCCCHHHCCHHHHHHHHHCCCCCCCCCCCCCCCCEE FFKIQGIGNLGYAARGTAGDGLYYCWANQRVNIRQSVFRNNAGSGVGDLGGGDTDNSSRD EEEEECCCCCCCEECCCCCCCEEEEEECCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCC TDNIIEDSIMEGNFRAGIEVNGGGNTANNIIRRNVIRNNNTGNQDYAGINLLSKRGPVQR CHHHHHHHHHCCCEEEEEEECCCCCHHHHHHHHHHHCCCCCCCCCCCCEEEECCCCCEEE YIIQDNIVENTAGSNQLFGIREVNLAVPPTTPVDYLTDFNTITNNTIYNHPSNNLVVIGP EEEECCCCCCCCCCCEEEEEEEEEEECCCCCCHHHHHCCCCCCCCEEEECCCCCEEEECC NTVATGNIFTAPGAVITPTPTNIQPTATATIAPTNTPTPTGSYVPRLIMYNADTDQVMYD CCEECCCEEECCCCEECCCCCCCCCCEEEEEECCCCCCCCCCCCCEEEEEECCCCCEEEC PIPNGVTINYATLGTRNISIVAPTAPSSGIGSVRFWVDSVVYRTESGRPYSIAGDQTNGT CCCCCEEEEEEEECCCEEEEEECCCCCCCCCEEHEEEEEEEEECCCCCEEEEECCCCCCC DFLPMNPALAHGTHVIKAATYTGSGGTGTQGTPYQIVINIVDSNATATPIPTNTNTPVPT EEEECCCHHHCCCEEEEEEEEECCCCCCCCCCCEEEEEEEECCCCCCCCCCCCCCCCCCC VPTATATATNTPTNTPTNTATNTPTATAIATATNTPTEIATPTATVTEVATATPTEIATI CCCCCEECCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCHHHHHCCCCCCEEEEE TATATDVATVTATEIATATATATITATLTNTPTNTPTNTATATLTETPTATLEPSVTPSN EEECCCEEEEEHHHHEEEEEEEEEEEEEECCCCCCCCCCEEEEEECCCCCEECCCCCCCC TPTATTTVTTPVPSTHHVYAPWVTN CCCEEEEEECCCCCCCEEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA