Click here to switch to the map view.

The map label for this gene is sasA [H]

Identifier: 159898848

GI number: 159898848

Start: 2969005

End: 2970261

Strand: Reverse

Name: sasA [H]

Synonym: Haur_2327

Alternate gene names: 159898848

Gene position: 2970261-2969005 (Counterclockwise)

Preceding gene: 159898851

Following gene: 159898845

Centisome position: 46.8

GC content: 51.71

Gene sequence:

>1257_bases
ATGAATCAGCATGAGGATGATCGCGCTGCCGAACAGGCAATATTGGAGCGTTTGGCAACCCTCAGCACGATGCAGTTTGA
TGATGTTGATCGTGCAATTCAGACCTATCTGGCAGTTGCATGTGAAGTAACTGGTACGGCTACCGCCCTGATTGGCGATT
TGAATCGAACCCATCAATATATTCGGGCAATTTATCCAGCGACGACCGGCAATTTGGCAGCCGGCAGTACGCTTGCCCGT
GAAGATACTTTTTGTCAGTATATTGATGTGACAGCACAACCTTTGGTGGTTGACGATGCTGAGCTAGATCTGCGGGTTCA
GCGCTTGCTTGAACGGCTAGAAACACCCGTGCGAGCCTATTTGGGCGTGCCAATTCCAGCTTCAACCGCAGGGTTGACTC
CAACCTTGTGTACCTTTGATCCGCAGGCGCATTGCTTTACACCAATCCATGTGGCAGCGCTTAAACTTTTAGCCCACCAA
ATTGCCCGCTGGATGCCGCTGCTACGTGCGCCCGCGACTGATGAGCCGCCCGTTGCACTGACGAATCTGAGTGTCGCTGA
ACTTAACCAAATCGTCGCCCACGATATTCGTAATCCACTGCATTTTTTGCAGGGAACTTTAGAATTATTGCAAGGTGATC
CGTTATTACCAGCTGATCATGCGCTTGGCTCGTTGTTGCCCCAAGCCTATAACTCAGTCTTGCATATTCAGCGGCTTGTG
CGCGATTTGGTCGATGGCACTGCCTTGATGACTGGAACGCTCTCATTTGTGCGCCATACAATTGATCTAAGCACGTTAAT
TTCTGAGATTGTGGCTGTTGCTAGCACGATGCTGCGTTCAACCTGTCGCATTCATCAGGAGATCGCGCCAGATCTCCCGC
CGCTGATCAGTGATCGTGATCGGATTTGGCAAATTGTGCACAATCTTGTCAGCAATGCGGTGCGCTATACCGAGGCAGGC
ACGATTACGATTCGGGCTTATCCCAACGATCATCACATGTTGAAGATTGAAATTGAAGATACCGGGCCTGGCATCAACCC
TGCTGATAGCGTGCGGATTTGGGAACGCCACACGCGTGCTAGTACGATCGCCCAAGGCTGGGGCTTAGGTTTAGCAATTG
TGCGGGCACTGGTGCTGGCCTTGGGCGGGCAAGTTGGCATGACCAGCACGTTGGGCCAGGGTAGTTGTTTTTGGGTAACT
TTTCCCTTCGTTCGGCCTGAACCAGCCTTGGTCGATTATCAGCCTTGGCGTTCGTAG

Upstream 100 bases:

>100_bases
ATCGCTTGTTTTGGAGTGAATTGGCGTTGTATACTAACAATTGCTAAGGCGAAATGATGATATATGGCTTGGGAAATCGT
GCTAGAAAGAGAGTTTATCA

Downstream 100 bases:

>100_bases
TGCTTTGCTCATTTGACCAATAACCTAATTGCTCGCTTGCTCAGGTGCGTCACAATAATGTTGCAGCACATTCCATAACT
CAGGATTATAGTTAAAGTAT

Product: GAF sensor signal transduction histidine kinase

Products: NA

Alternate protein names: Synechococcus adaptive sensor protein A [H]

Number of amino acids: Translated: 418; Mature: 418

Protein sequence:

>418_residues
MNQHEDDRAAEQAILERLATLSTMQFDDVDRAIQTYLAVACEVTGTATALIGDLNRTHQYIRAIYPATTGNLAAGSTLAR
EDTFCQYIDVTAQPLVVDDAELDLRVQRLLERLETPVRAYLGVPIPASTAGLTPTLCTFDPQAHCFTPIHVAALKLLAHQ
IARWMPLLRAPATDEPPVALTNLSVAELNQIVAHDIRNPLHFLQGTLELLQGDPLLPADHALGSLLPQAYNSVLHIQRLV
RDLVDGTALMTGTLSFVRHTIDLSTLISEIVAVASTMLRSTCRIHQEIAPDLPPLISDRDRIWQIVHNLVSNAVRYTEAG
TITIRAYPNDHHMLKIEIEDTGPGINPADSVRIWERHTRASTIAQGWGLGLAIVRALVLALGGQVGMTSTLGQGSCFWVT
FPFVRPEPALVDYQPWRS

Sequences:

>Translated_418_residues
MNQHEDDRAAEQAILERLATLSTMQFDDVDRAIQTYLAVACEVTGTATALIGDLNRTHQYIRAIYPATTGNLAAGSTLAR
EDTFCQYIDVTAQPLVVDDAELDLRVQRLLERLETPVRAYLGVPIPASTAGLTPTLCTFDPQAHCFTPIHVAALKLLAHQ
IARWMPLLRAPATDEPPVALTNLSVAELNQIVAHDIRNPLHFLQGTLELLQGDPLLPADHALGSLLPQAYNSVLHIQRLV
RDLVDGTALMTGTLSFVRHTIDLSTLISEIVAVASTMLRSTCRIHQEIAPDLPPLISDRDRIWQIVHNLVSNAVRYTEAG
TITIRAYPNDHHMLKIEIEDTGPGINPADSVRIWERHTRASTIAQGWGLGLAIVRALVLALGGQVGMTSTLGQGSCFWVT
FPFVRPEPALVDYQPWRS
>Mature_418_residues
MNQHEDDRAAEQAILERLATLSTMQFDDVDRAIQTYLAVACEVTGTATALIGDLNRTHQYIRAIYPATTGNLAAGSTLAR
EDTFCQYIDVTAQPLVVDDAELDLRVQRLLERLETPVRAYLGVPIPASTAGLTPTLCTFDPQAHCFTPIHVAALKLLAHQ
IARWMPLLRAPATDEPPVALTNLSVAELNQIVAHDIRNPLHFLQGTLELLQGDPLLPADHALGSLLPQAYNSVLHIQRLV
RDLVDGTALMTGTLSFVRHTIDLSTLISEIVAVASTMLRSTCRIHQEIAPDLPPLISDRDRIWQIVHNLVSNAVRYTEAG
TITIRAYPNDHHMLKIEIEDTGPGINPADSVRIWERHTRASTIAQGWGLGLAIVRALVLALGGQVGMTSTLGQGSCFWVT
FPFVRPEPALVDYQPWRS

Specific function: May be involved in signal transduction. Participates in the kaiABC clock protein complex, which constitutes the main circadian regulator in cyanobacteria, via its interaction with kaiC. Required for robustness of the circadian rhythm of gene expression an

COG id: NA

COG function: NA

Gene ontology:

Cell location: Integral Membrane Protein. Inner Membrane [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 histidine kinase domain [H]

Homologues:

Organism=Escherichia coli, GI87081816, Length=216, Percent_Identity=32.8703703703704, Blast_Score=103, Evalue=2e-23,
Organism=Escherichia coli, GI48994928, Length=218, Percent_Identity=27.5229357798165, Blast_Score=89, Evalue=6e-19,
Organism=Escherichia coli, GI145693157, Length=218, Percent_Identity=29.3577981651376, Blast_Score=88, Evalue=1e-18,
Organism=Escherichia coli, GI1789149, Length=217, Percent_Identity=30.4147465437788, Blast_Score=88, Evalue=1e-18,
Organism=Escherichia coli, GI1786600, Length=223, Percent_Identity=30.9417040358744, Blast_Score=79, Evalue=4e-16,
Organism=Escherichia coli, GI1788713, Length=222, Percent_Identity=25.6756756756757, Blast_Score=76, Evalue=4e-15,
Organism=Escherichia coli, GI1786912, Length=222, Percent_Identity=29.7297297297297, Blast_Score=74, Evalue=1e-14,
Organism=Escherichia coli, GI1788549, Length=226, Percent_Identity=26.9911504424779, Blast_Score=73, Evalue=3e-14,
Organism=Escherichia coli, GI1788393, Length=219, Percent_Identity=27.3972602739726, Blast_Score=71, Evalue=2e-13,
Organism=Escherichia coli, GI1790436, Length=240, Percent_Identity=28.75, Blast_Score=70, Evalue=2e-13,
Organism=Escherichia coli, GI1790300, Length=228, Percent_Identity=30.7017543859649, Blast_Score=69, Evalue=4e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003594
- InterPro:   IPR011649
- InterPro:   IPR004358
- InterPro:   IPR003661
- InterPro:   IPR005467
- InterPro:   IPR009082
- InterPro:   IPR012336
- InterPro:   IPR012335 [H]

Pfam domain/function: PF02518 HATPase_c; PF00512 HisKA; PF07689 KaiB [H]

EC number: 2.7.3.- [C]

Molecular weight: Translated: 45927; Mature: 45927

Theoretical pI: Translated: 5.66; Mature: 5.66

Prosite motif: PS50109 HIS_KIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNQHEDDRAAEQAILERLATLSTMQFDDVDRAIQTYLAVACEVTGTATALIGDLNRTHQY
CCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH
IRAIYPATTGNLAAGSTLAREDTFCQYIDVTAQPLVVDDAELDLRVQRLLERLETPVRAY
HHHHCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCEEECCCHHHHHHHHHHHHHCCHHHHH
LGVPIPASTAGLTPTLCTFDPQAHCFTPIHVAALKLLAHQIARWMPLLRAPATDEPPVAL
HCCCCCCCCCCCCCEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEE
TNLSVAELNQIVAHDIRNPLHFLQGTLELLQGDPLLPADHALGSLLPQAYNSVLHIQRLV
ECCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
RDLVDGTALMTGTLSFVRHTIDLSTLISEIVAVASTMLRSTCRIHQEIAPDLPPLISDRD
HHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHH
RIWQIVHNLVSNAVRYTEAGTITIRAYPNDHHMLKIEIEDTGPGINPADSVRIWERHTRA
HHHHHHHHHHHHHHHEECCCEEEEEEECCCCCEEEEEEECCCCCCCCHHHHHHHHHHHHH
STIAQGWGLGLAIVRALVLALGGQVGMTSTLGQGSCFWVTFPFVRPEPALVDYQPWRS
HHHHHHCCHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEECCCCCCCCEECCCCCCC
>Mature Secondary Structure
MNQHEDDRAAEQAILERLATLSTMQFDDVDRAIQTYLAVACEVTGTATALIGDLNRTHQY
CCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH
IRAIYPATTGNLAAGSTLAREDTFCQYIDVTAQPLVVDDAELDLRVQRLLERLETPVRAY
HHHHCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCEEECCCHHHHHHHHHHHHHCCHHHHH
LGVPIPASTAGLTPTLCTFDPQAHCFTPIHVAALKLLAHQIARWMPLLRAPATDEPPVAL
HCCCCCCCCCCCCCEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEE
TNLSVAELNQIVAHDIRNPLHFLQGTLELLQGDPLLPADHALGSLLPQAYNSVLHIQRLV
ECCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
RDLVDGTALMTGTLSFVRHTIDLSTLISEIVAVASTMLRSTCRIHQEIAPDLPPLISDRD
HHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHH
RIWQIVHNLVSNAVRYTEAGTITIRAYPNDHHMLKIEIEDTGPGINPADSVRIWERHTRA
HHHHHHHHHHHHHHHEECCCEEEEEEECCCCCEEEEEEECCCCCCCCHHHHHHHHHHHHH
STIAQGWGLGLAIVRALVLALGGQVGMTSTLGQGSCFWVTFPFVRPEPALVDYQPWRS
HHHHHHCCHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEECCCCCCCCEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: NA