Definition Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome.
Accession NC_009972
Length 6,346,587

Click here to switch to the map view.

The map label for this gene is 159898824

Identifier: 159898824

GI number: 159898824

Start: 2942465

End: 2943256

Strand: Direct

Name: 159898824

Synonym: Haur_2303

Alternate gene names: NA

Gene position: 2942465-2943256 (Clockwise)

Preceding gene: 159898823

Following gene: 159898826

Centisome position: 46.36

GC content: 53.03

Gene sequence:

>792_bases
ATGAGCAACAACAGGCTTGAATATTGGCAATACTTGCCGAAAAAGCCGCTCTATCAACGACCTTTAGTGCTGCTCCACGG
CGCTTGGCATGGCGCTTGGTGCTGGCAAAACGCCGCCCACGACTTCGCTGAACGTGGGTTTGAGGTGCATACACTCAGTT
TGCGCGGCCACGGTGGCAGCAGTATGCCTCGATTGTTTAACTTGGTTGGGCTACAACATTACATCGACGATTTACTAGCG
CTGGTTGATACTCTTCAGCCAGCGCCAATTGTGGTTGCTCACAGCCTTGGCGGCTATGTGTTACAGCATGCCTTGCTCCA
GCGCCAATTGCCAGCAGCGGTATTACTGGCTAGCATGCCCCAAACTGGGGCATTGGGTTTCACCTTGCGCACTATCAGCA
ATCAACCAAACGTGGCTTTACGCACGTTGTTGACCGCCGACGGGTTTAGTTTTGTGCGCACGCCAGCCTTAGCCAAAGCC
CTCTTTCTCCGTGATAACGCTTCCGCCAGCCAAGCTCAGGCACTGCACAGCCAACTAAACAGCGAATCGATCAAGGTTTT
GCTCGATGCACTCATGCATAAACCTGAGCCAAGCAAGATTAAAACCCCCATTATGGTAATTGCGGCTGAACGTGATCGCG
CATTTACTCTGGCGGAACAGCGTTCATTAGCCAATGCCTATCAAGCACCATTGATCGTCGTGCCACAGGCCGCCCACGAT
TTGATGTTTGACCCAGCTTGGCCCTTAGTCGCCGATGCGATCGAAGGCTGGGCCAGTCGCCATCAAAAATAG

Upstream 100 bases:

>100_bases
GTTATCATGCAGGCAATTTTCCATGCGCTGGATGATCAAGCAACAACCTTGCAACTAATTCGCGAGGAACGGGATCGGGC
TGCGGCCCAAGAGGAAGCCC

Downstream 100 bases:

>100_bases
TTATTCAACCAACCACGCACCCAAGCCAACCAAGGCTGCATCCATCGTCGGCGGATGAAACAAACCAGCTCGCACATCAC
GGGCATAGCGCTCTAAGGCC

Product: alpha/beta hydrolase fold-domain containing protein

Products: NA

Alternate protein names: Alpha/Beta Hydrolase Fold Protein; Hydrolase Or Acyltransferase; Alpha/Beta Hydrolase Fold-Containing Protein; Alpha/Beta Hydrolase Fold-Domain Containing Protein; Hydrolase Alpha/Beta Hydrolase Fold Family; Hydrolase; Acetone-Cyanohydrin Lyase

Number of amino acids: Translated: 263; Mature: 262

Protein sequence:

>263_residues
MSNNRLEYWQYLPKKPLYQRPLVLLHGAWHGAWCWQNAAHDFAERGFEVHTLSLRGHGGSSMPRLFNLVGLQHYIDDLLA
LVDTLQPAPIVVAHSLGGYVLQHALLQRQLPAAVLLASMPQTGALGFTLRTISNQPNVALRTLLTADGFSFVRTPALAKA
LFLRDNASASQAQALHSQLNSESIKVLLDALMHKPEPSKIKTPIMVIAAERDRAFTLAEQRSLANAYQAPLIVVPQAAHD
LMFDPAWPLVADAIEGWASRHQK

Sequences:

>Translated_263_residues
MSNNRLEYWQYLPKKPLYQRPLVLLHGAWHGAWCWQNAAHDFAERGFEVHTLSLRGHGGSSMPRLFNLVGLQHYIDDLLA
LVDTLQPAPIVVAHSLGGYVLQHALLQRQLPAAVLLASMPQTGALGFTLRTISNQPNVALRTLLTADGFSFVRTPALAKA
LFLRDNASASQAQALHSQLNSESIKVLLDALMHKPEPSKIKTPIMVIAAERDRAFTLAEQRSLANAYQAPLIVVPQAAHD
LMFDPAWPLVADAIEGWASRHQK
>Mature_262_residues
SNNRLEYWQYLPKKPLYQRPLVLLHGAWHGAWCWQNAAHDFAERGFEVHTLSLRGHGGSSMPRLFNLVGLQHYIDDLLAL
VDTLQPAPIVVAHSLGGYVLQHALLQRQLPAAVLLASMPQTGALGFTLRTISNQPNVALRTLLTADGFSFVRTPALAKAL
FLRDNASASQAQALHSQLNSESIKVLLDALMHKPEPSKIKTPIMVIAAERDRAFTLAEQRSLANAYQAPLIVVPQAAHDL
MFDPAWPLVADAIEGWASRHQK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 29079; Mature: 28948

Theoretical pI: Translated: 9.38; Mature: 9.38

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSNNRLEYWQYLPKKPLYQRPLVLLHGAWHGAWCWQNAAHDFAERGFEVHTLSLRGHGGS
CCCCCCHHHHHCCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHHCCCEEEEEEEECCCCC
SMPRLFNLVGLQHYIDDLLALVDTLQPAPIVVAHSLGGYVLQHALLQRQLPAAVLLASMP
CHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEHHHHHHHHHHHHHHHHCCHHHHHHCCC
QTGALGFTLRTISNQPNVALRTLLTADGFSFVRTPALAKALFLRDNASASQAQALHSQLN
CCCCCEEEEEECCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHC
SESIKVLLDALMHKPEPSKIKTPIMVIAAERDRAFTLAEQRSLANAYQAPLIVVPQAAHD
HHHHHHHHHHHHCCCCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHCCCEEEECCCHHH
LMFDPAWPLVADAIEGWASRHQK
HCCCCCHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
SNNRLEYWQYLPKKPLYQRPLVLLHGAWHGAWCWQNAAHDFAERGFEVHTLSLRGHGGS
CCCCCHHHHHCCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHHCCCEEEEEEEECCCCC
SMPRLFNLVGLQHYIDDLLALVDTLQPAPIVVAHSLGGYVLQHALLQRQLPAAVLLASMP
CHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEHHHHHHHHHHHHHHHHCCHHHHHHCCC
QTGALGFTLRTISNQPNVALRTLLTADGFSFVRTPALAKALFLRDNASASQAQALHSQLN
CCCCCEEEEEECCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHC
SESIKVLLDALMHKPEPSKIKTPIMVIAAERDRAFTLAEQRSLANAYQAPLIVVPQAAHD
HHHHHHHHHHHHCCCCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHCCCEEEECCCHHH
LMFDPAWPLVADAIEGWASRHQK
HCCCCCHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA