Definition Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome.
Accession NC_009972
Length 6,346,587

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The map label for this gene is 159898823

Identifier: 159898823

GI number: 159898823

Start: 2941852

End: 2942484

Strand: Direct

Name: 159898823

Synonym: Haur_2302

Alternate gene names: NA

Gene position: 2941852-2942484 (Clockwise)

Preceding gene: 159898822

Following gene: 159898824

Centisome position: 46.35

GC content: 52.76

Gene sequence:

>633_bases
ATGCTCGATCTCCACCCAAGCTTTGAACGTGCTACCACCGATGCTGTGGCCCATTTCACCCCTTTGATCGAGGTGATCGC
CGCGATTGCCCATGGCGATGCCACCCGCCGCGCTGAGGTCGAATTTTTGTTGCCACAAATTGATAATAATGGCTGGCAAA
TTCAGGCAGCAGTTGAAGCTATTTGGGCTGGCGAACGCAATTTTAGCCAACTCAGCGCTGGCCTCGACACCAATAGCGCG
GCGATTGTGCAAGCAATTTTGGTCGCCGTTAGCCAAACGCCTGATCCAGAGGAAGCGCGTTTGTCCAAGCTGATCGGCGA
ATGGCGACCAATTATTTTGACCGTCGCTGCTGCTCATTTTGGGGTTCAGCATGCCTATACTGATCTCGATGGATTTTTGC
CCCAGCTTGAAGCTCAGGCTCAATGGCAAACTCTCGCTCAACGACTACGATTGCTCGTAGCAGGTGATACCAACCGCCAA
CGGCTCTTGGCAGATCTTGACACAACTGATACCGTTATCATGCAGGCAATTTTCCATGCGCTGGATGATCAAGCAACAAC
CTTGCAACTAATTCGCGAGGAACGGGATCGGGCTGCGGCCCAAGAGGAAGCCCATGAGCAACAACAGGCTTGA

Upstream 100 bases:

>100_bases
AAAGTCACTCAATCGCATATGATAGCAACAGGTTTGATTTTGCGTATCAAGCTTAATCAAGCCTGTTGTTTTGCTTGCTA
GTTAAAAAGGATAGATTGCC

Downstream 100 bases:

>100_bases
ATATTGGCAATACTTGCCGAAAAAGCCGCTCTATCAACGACCTTTAGTGCTGCTCCACGGCGCTTGGCATGGCGCTTGGT
GCTGGCAAAACGCCGCCCAC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 210; Mature: 210

Protein sequence:

>210_residues
MLDLHPSFERATTDAVAHFTPLIEVIAAIAHGDATRRAEVEFLLPQIDNNGWQIQAAVEAIWAGERNFSQLSAGLDTNSA
AIVQAILVAVSQTPDPEEARLSKLIGEWRPIILTVAAAHFGVQHAYTDLDGFLPQLEAQAQWQTLAQRLRLLVAGDTNRQ
RLLADLDTTDTVIMQAIFHALDDQATTLQLIREERDRAAAQEEAHEQQQA

Sequences:

>Translated_210_residues
MLDLHPSFERATTDAVAHFTPLIEVIAAIAHGDATRRAEVEFLLPQIDNNGWQIQAAVEAIWAGERNFSQLSAGLDTNSA
AIVQAILVAVSQTPDPEEARLSKLIGEWRPIILTVAAAHFGVQHAYTDLDGFLPQLEAQAQWQTLAQRLRLLVAGDTNRQ
RLLADLDTTDTVIMQAIFHALDDQATTLQLIREERDRAAAQEEAHEQQQA
>Mature_210_residues
MLDLHPSFERATTDAVAHFTPLIEVIAAIAHGDATRRAEVEFLLPQIDNNGWQIQAAVEAIWAGERNFSQLSAGLDTNSA
AIVQAILVAVSQTPDPEEARLSKLIGEWRPIILTVAAAHFGVQHAYTDLDGFLPQLEAQAQWQTLAQRLRLLVAGDTNRQ
RLLADLDTTDTVIMQAIFHALDDQATTLQLIREERDRAAAQEEAHEQQQA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 23187; Mature: 23187

Theoretical pI: Translated: 4.38; Mature: 4.38

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
1.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
1.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLDLHPSFERATTDAVAHFTPLIEVIAAIAHGDATRRAEVEFLLPQIDNNGWQIQAAVEA
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHEEECEEECCCCEEEHHHHHH
IWAGERNFSQLSAGLDTNSAAIVQAILVAVSQTPDPEEARLSKLIGEWRPIILTVAAAHF
HHCCCCCHHHHHCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCHHHHHHHHHHHH
GVQHAYTDLDGFLPQLEAQAQWQTLAQRLRLLVAGDTNRQRLLADLDTTDTVIMQAIFHA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHCCCHHHHHHHHHHHH
LDDQATTLQLIREERDRAAAQEEAHEQQQA
HCCCHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MLDLHPSFERATTDAVAHFTPLIEVIAAIAHGDATRRAEVEFLLPQIDNNGWQIQAAVEA
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHEEECEEECCCCEEEHHHHHH
IWAGERNFSQLSAGLDTNSAAIVQAILVAVSQTPDPEEARLSKLIGEWRPIILTVAAAHF
HHCCCCCHHHHHCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCHHHHHHHHHHHH
GVQHAYTDLDGFLPQLEAQAQWQTLAQRLRLLVAGDTNRQRLLADLDTTDTVIMQAIFHA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHCCCHHHHHHHHHHHH
LDDQATTLQLIREERDRAAAQEEAHEQQQA
HCCCHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA