| Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
|---|---|
| Accession | NC_009972 |
| Length | 6,346,587 |
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The map label for this gene is 159898814
Identifier: 159898814
GI number: 159898814
Start: 2933186
End: 2934520
Strand: Direct
Name: 159898814
Synonym: Haur_2293
Alternate gene names: NA
Gene position: 2933186-2934520 (Clockwise)
Preceding gene: 159898813
Following gene: 159898815
Centisome position: 46.22
GC content: 50.19
Gene sequence:
>1335_bases ATGCGATTTCCTTGGCGGCGGCTAGGTACGATCGTTGGTTGGCTGATATTTGGGGCATGGGTAGGATTTGGCTATAACAT CGTCGCGCAGAGTGGGCAACAGGGCGTGCAAACTGTCGATTTCCAAAGCTATGCCTTGGCAGCCGAACGCATGCAACAAC AGGCAAATCCCTATCCTGAAATCTCTGAGGCGCAAGCGATGTGGCGCAGCGTGCATCTGTGGGAGCAGCGCATGCTCAAT GCGCCAGATCCTACGGCCAAACTGGCGGTTAAAGCCCAGTATGATCAAGTTGGGCAGATCGTTGGGCCATATTTGTACCC GCCCACTTTAGCCTCAATTGTGGCTGGTTTGCAGCTTAGCGGCCTTGGTATGGCTACAATCTTGAGTATTGCAACGATTA TATTTGTGGGATTTTGGCTCTACCTAACCAACCAAAGTAGTGCTTGGACAATTTGGGTTATACTCAGCATGGAGTGTTTG ATTGGTATTGTAGCGGGCAATATCGAGTTTGTACTGCTGCTTGGCAGTTTGGTTGGCGGTTACTGGGCGCTCTATCACTC ACGTCTTGCTGCCGCCCTCATTATTGCGCTCATGCTCTTGATCAAGCCGTTTTATGCCTTGTTTTTTGTGGCTTTGGCGC TGCTGGCCTATTGTAATCTCGCCGATCAGGCTGCTCGCCATGCCTTGATTAAACGGATTGCGAGCATCGCAGCAATCGCC TTGGGACTCATTGGACTCGAAATTTGGCGCTGGGATCGTGCGCTGCGGCAGGAAACGTTTAACTATTTAACCCATACCTT GGAATATCAATGGTTCAACTTTCCAGCTGCCGAGCAAAGCCCAATGAGCATGTGGAATCGCACACCCTTGCAAGGCTTGA TTAATCTTGGAATTGCGCCAAGTGTTGCCCAAACCCTAGCATTTGGGTTATGGCTATTGGTGTTGGGGCTAAGTTGTTGG TTAGTTTGGCGCAAACAATTGGGCTTTACCATGCTCTATGGTCTGAGCTTTATCTTGTTGTATTGGGGGCGGCCTGTGGG TTGGTCGTTTTCATTTATCGAATTGATTGTGCTGAGTTTGGCGTGGCCTTGGCTCAAAATGTGGGGCAAAATTAGCCTTG GTAGCGCCATGCTTGGCCTCATTGGCTCGCGTTGGATCGCGCTCATGCTCACGGCCCAAGCCCAGGGGATGCCACTCAAC ACCCTACAAACCAACACCTTCGCATGGGAATCGTGGTTGGTGTTACCACTGTGTCTAGGCTGTTTAGGCTATGCTATTCA TCAGCAATCCCAACAACCTAGCACCTTGAACAAGCAACAAATGGTCATTAATTAG
Upstream 100 bases:
>100_bases TACTCTACGCCCATTGCGTTCAATTCCCCTCTGTTCTACGTTCTTTTTTTGCCTCGTAGGCTATACTAAGCCTCGCAGTA TTTAGGATGAAAGGTTGATT
Downstream 100 bases:
>100_bases CTCATTTTCAATAAAATATCAACAATTACCGCTATTTTGGCTAAAACCAAAGCGTGAATTTAGACGAATGGTTGCAACAG GAACTGTCTATTGGAGGTTG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 444; Mature: 444
Protein sequence:
>444_residues MRFPWRRLGTIVGWLIFGAWVGFGYNIVAQSGQQGVQTVDFQSYALAAERMQQQANPYPEISEAQAMWRSVHLWEQRMLN APDPTAKLAVKAQYDQVGQIVGPYLYPPTLASIVAGLQLSGLGMATILSIATIIFVGFWLYLTNQSSAWTIWVILSMECL IGIVAGNIEFVLLLGSLVGGYWALYHSRLAAALIIALMLLIKPFYALFFVALALLAYCNLADQAARHALIKRIASIAAIA LGLIGLEIWRWDRALRQETFNYLTHTLEYQWFNFPAAEQSPMSMWNRTPLQGLINLGIAPSVAQTLAFGLWLLVLGLSCW LVWRKQLGFTMLYGLSFILLYWGRPVGWSFSFIELIVLSLAWPWLKMWGKISLGSAMLGLIGSRWIALMLTAQAQGMPLN TLQTNTFAWESWLVLPLCLGCLGYAIHQQSQQPSTLNKQQMVIN
Sequences:
>Translated_444_residues MRFPWRRLGTIVGWLIFGAWVGFGYNIVAQSGQQGVQTVDFQSYALAAERMQQQANPYPEISEAQAMWRSVHLWEQRMLN APDPTAKLAVKAQYDQVGQIVGPYLYPPTLASIVAGLQLSGLGMATILSIATIIFVGFWLYLTNQSSAWTIWVILSMECL IGIVAGNIEFVLLLGSLVGGYWALYHSRLAAALIIALMLLIKPFYALFFVALALLAYCNLADQAARHALIKRIASIAAIA LGLIGLEIWRWDRALRQETFNYLTHTLEYQWFNFPAAEQSPMSMWNRTPLQGLINLGIAPSVAQTLAFGLWLLVLGLSCW LVWRKQLGFTMLYGLSFILLYWGRPVGWSFSFIELIVLSLAWPWLKMWGKISLGSAMLGLIGSRWIALMLTAQAQGMPLN TLQTNTFAWESWLVLPLCLGCLGYAIHQQSQQPSTLNKQQMVIN >Mature_444_residues MRFPWRRLGTIVGWLIFGAWVGFGYNIVAQSGQQGVQTVDFQSYALAAERMQQQANPYPEISEAQAMWRSVHLWEQRMLN APDPTAKLAVKAQYDQVGQIVGPYLYPPTLASIVAGLQLSGLGMATILSIATIIFVGFWLYLTNQSSAWTIWVILSMECL IGIVAGNIEFVLLLGSLVGGYWALYHSRLAAALIIALMLLIKPFYALFFVALALLAYCNLADQAARHALIKRIASIAAIA LGLIGLEIWRWDRALRQETFNYLTHTLEYQWFNFPAAEQSPMSMWNRTPLQGLINLGIAPSVAQTLAFGLWLLVLGLSCW LVWRKQLGFTMLYGLSFILLYWGRPVGWSFSFIELIVLSLAWPWLKMWGKISLGSAMLGLIGSRWIALMLTAQAQGMPLN TLQTNTFAWESWLVLPLCLGCLGYAIHQQSQQPSTLNKQQMVIN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 49760; Mature: 49760
Theoretical pI: Translated: 9.21; Mature: 9.21
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRFPWRRLGTIVGWLIFGAWVGFGYNIVAQSGQQGVQTVDFQSYALAAERMQQQANPYPE CCCCHHHHHHHHHHHHHHHHHHCCHHHHHCCCCCCCCEECHHHHHHHHHHHHHHCCCCCC ISEAQAMWRSVHLWEQRMLNAPDPTAKLAVKAQYDQVGQIVGPYLYPPTLASIVAGLQLS HHHHHHHHHHHHHHHHHHCCCCCCCHHEEEEEHHHHHHHHHCCCCCCHHHHHHHHCCHHC GLGMATILSIATIIFVGFWLYLTNQSSAWTIWVILSMECLIGIVAGNIEFVLLLGSLVGG CCHHHHHHHHHHHHHHHHHHHHCCCCCCEEEHHHHHHHHHHHHHHCCHHHHHHHHHHHHH YWALYHSRLAAALIIALMLLIKPFYALFFVALALLAYCNLADQAARHALIKRIASIAAIA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHH LGLIGLEIWRWDRALRQETFNYLTHTLEYQWFNFPAAEQSPMSMWNRTPLQGLINLGIAP HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCCHHHHHCCCHHHHHHHCCCCH SVAQTLAFGLWLLVLGLSCWLVWRKQLGFTMLYGLSFILLYWGRPVGWSFSFIELIVLSL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHH AWPWLKMWGKISLGSAMLGLIGSRWIALMLTAQAQGMPLNTLQTNTFAWESWLVLPLCLG HHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHH CLGYAIHQQSQQPSTLNKQQMVIN HHHHHHHHCCCCCCCCCCCCCCCC >Mature Secondary Structure MRFPWRRLGTIVGWLIFGAWVGFGYNIVAQSGQQGVQTVDFQSYALAAERMQQQANPYPE CCCCHHHHHHHHHHHHHHHHHHCCHHHHHCCCCCCCCEECHHHHHHHHHHHHHHCCCCCC ISEAQAMWRSVHLWEQRMLNAPDPTAKLAVKAQYDQVGQIVGPYLYPPTLASIVAGLQLS HHHHHHHHHHHHHHHHHHCCCCCCCHHEEEEEHHHHHHHHHCCCCCCHHHHHHHHCCHHC GLGMATILSIATIIFVGFWLYLTNQSSAWTIWVILSMECLIGIVAGNIEFVLLLGSLVGG CCHHHHHHHHHHHHHHHHHHHHCCCCCCEEEHHHHHHHHHHHHHHCCHHHHHHHHHHHHH YWALYHSRLAAALIIALMLLIKPFYALFFVALALLAYCNLADQAARHALIKRIASIAAIA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHH LGLIGLEIWRWDRALRQETFNYLTHTLEYQWFNFPAAEQSPMSMWNRTPLQGLINLGIAP HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCCHHHHHCCCHHHHHHHCCCCH SVAQTLAFGLWLLVLGLSCWLVWRKQLGFTMLYGLSFILLYWGRPVGWSFSFIELIVLSL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHH AWPWLKMWGKISLGSAMLGLIGSRWIALMLTAQAQGMPLNTLQTNTFAWESWLVLPLCLG HHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHH CLGYAIHQQSQQPSTLNKQQMVIN HHHHHHHHCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA