Definition Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome.
Accession NC_009972
Length 6,346,587

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The map label for this gene is 159898814

Identifier: 159898814

GI number: 159898814

Start: 2933186

End: 2934520

Strand: Direct

Name: 159898814

Synonym: Haur_2293

Alternate gene names: NA

Gene position: 2933186-2934520 (Clockwise)

Preceding gene: 159898813

Following gene: 159898815

Centisome position: 46.22

GC content: 50.19

Gene sequence:

>1335_bases
ATGCGATTTCCTTGGCGGCGGCTAGGTACGATCGTTGGTTGGCTGATATTTGGGGCATGGGTAGGATTTGGCTATAACAT
CGTCGCGCAGAGTGGGCAACAGGGCGTGCAAACTGTCGATTTCCAAAGCTATGCCTTGGCAGCCGAACGCATGCAACAAC
AGGCAAATCCCTATCCTGAAATCTCTGAGGCGCAAGCGATGTGGCGCAGCGTGCATCTGTGGGAGCAGCGCATGCTCAAT
GCGCCAGATCCTACGGCCAAACTGGCGGTTAAAGCCCAGTATGATCAAGTTGGGCAGATCGTTGGGCCATATTTGTACCC
GCCCACTTTAGCCTCAATTGTGGCTGGTTTGCAGCTTAGCGGCCTTGGTATGGCTACAATCTTGAGTATTGCAACGATTA
TATTTGTGGGATTTTGGCTCTACCTAACCAACCAAAGTAGTGCTTGGACAATTTGGGTTATACTCAGCATGGAGTGTTTG
ATTGGTATTGTAGCGGGCAATATCGAGTTTGTACTGCTGCTTGGCAGTTTGGTTGGCGGTTACTGGGCGCTCTATCACTC
ACGTCTTGCTGCCGCCCTCATTATTGCGCTCATGCTCTTGATCAAGCCGTTTTATGCCTTGTTTTTTGTGGCTTTGGCGC
TGCTGGCCTATTGTAATCTCGCCGATCAGGCTGCTCGCCATGCCTTGATTAAACGGATTGCGAGCATCGCAGCAATCGCC
TTGGGACTCATTGGACTCGAAATTTGGCGCTGGGATCGTGCGCTGCGGCAGGAAACGTTTAACTATTTAACCCATACCTT
GGAATATCAATGGTTCAACTTTCCAGCTGCCGAGCAAAGCCCAATGAGCATGTGGAATCGCACACCCTTGCAAGGCTTGA
TTAATCTTGGAATTGCGCCAAGTGTTGCCCAAACCCTAGCATTTGGGTTATGGCTATTGGTGTTGGGGCTAAGTTGTTGG
TTAGTTTGGCGCAAACAATTGGGCTTTACCATGCTCTATGGTCTGAGCTTTATCTTGTTGTATTGGGGGCGGCCTGTGGG
TTGGTCGTTTTCATTTATCGAATTGATTGTGCTGAGTTTGGCGTGGCCTTGGCTCAAAATGTGGGGCAAAATTAGCCTTG
GTAGCGCCATGCTTGGCCTCATTGGCTCGCGTTGGATCGCGCTCATGCTCACGGCCCAAGCCCAGGGGATGCCACTCAAC
ACCCTACAAACCAACACCTTCGCATGGGAATCGTGGTTGGTGTTACCACTGTGTCTAGGCTGTTTAGGCTATGCTATTCA
TCAGCAATCCCAACAACCTAGCACCTTGAACAAGCAACAAATGGTCATTAATTAG

Upstream 100 bases:

>100_bases
TACTCTACGCCCATTGCGTTCAATTCCCCTCTGTTCTACGTTCTTTTTTTGCCTCGTAGGCTATACTAAGCCTCGCAGTA
TTTAGGATGAAAGGTTGATT

Downstream 100 bases:

>100_bases
CTCATTTTCAATAAAATATCAACAATTACCGCTATTTTGGCTAAAACCAAAGCGTGAATTTAGACGAATGGTTGCAACAG
GAACTGTCTATTGGAGGTTG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 444; Mature: 444

Protein sequence:

>444_residues
MRFPWRRLGTIVGWLIFGAWVGFGYNIVAQSGQQGVQTVDFQSYALAAERMQQQANPYPEISEAQAMWRSVHLWEQRMLN
APDPTAKLAVKAQYDQVGQIVGPYLYPPTLASIVAGLQLSGLGMATILSIATIIFVGFWLYLTNQSSAWTIWVILSMECL
IGIVAGNIEFVLLLGSLVGGYWALYHSRLAAALIIALMLLIKPFYALFFVALALLAYCNLADQAARHALIKRIASIAAIA
LGLIGLEIWRWDRALRQETFNYLTHTLEYQWFNFPAAEQSPMSMWNRTPLQGLINLGIAPSVAQTLAFGLWLLVLGLSCW
LVWRKQLGFTMLYGLSFILLYWGRPVGWSFSFIELIVLSLAWPWLKMWGKISLGSAMLGLIGSRWIALMLTAQAQGMPLN
TLQTNTFAWESWLVLPLCLGCLGYAIHQQSQQPSTLNKQQMVIN

Sequences:

>Translated_444_residues
MRFPWRRLGTIVGWLIFGAWVGFGYNIVAQSGQQGVQTVDFQSYALAAERMQQQANPYPEISEAQAMWRSVHLWEQRMLN
APDPTAKLAVKAQYDQVGQIVGPYLYPPTLASIVAGLQLSGLGMATILSIATIIFVGFWLYLTNQSSAWTIWVILSMECL
IGIVAGNIEFVLLLGSLVGGYWALYHSRLAAALIIALMLLIKPFYALFFVALALLAYCNLADQAARHALIKRIASIAAIA
LGLIGLEIWRWDRALRQETFNYLTHTLEYQWFNFPAAEQSPMSMWNRTPLQGLINLGIAPSVAQTLAFGLWLLVLGLSCW
LVWRKQLGFTMLYGLSFILLYWGRPVGWSFSFIELIVLSLAWPWLKMWGKISLGSAMLGLIGSRWIALMLTAQAQGMPLN
TLQTNTFAWESWLVLPLCLGCLGYAIHQQSQQPSTLNKQQMVIN
>Mature_444_residues
MRFPWRRLGTIVGWLIFGAWVGFGYNIVAQSGQQGVQTVDFQSYALAAERMQQQANPYPEISEAQAMWRSVHLWEQRMLN
APDPTAKLAVKAQYDQVGQIVGPYLYPPTLASIVAGLQLSGLGMATILSIATIIFVGFWLYLTNQSSAWTIWVILSMECL
IGIVAGNIEFVLLLGSLVGGYWALYHSRLAAALIIALMLLIKPFYALFFVALALLAYCNLADQAARHALIKRIASIAAIA
LGLIGLEIWRWDRALRQETFNYLTHTLEYQWFNFPAAEQSPMSMWNRTPLQGLINLGIAPSVAQTLAFGLWLLVLGLSCW
LVWRKQLGFTMLYGLSFILLYWGRPVGWSFSFIELIVLSLAWPWLKMWGKISLGSAMLGLIGSRWIALMLTAQAQGMPLN
TLQTNTFAWESWLVLPLCLGCLGYAIHQQSQQPSTLNKQQMVIN

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 49760; Mature: 49760

Theoretical pI: Translated: 9.21; Mature: 9.21

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRFPWRRLGTIVGWLIFGAWVGFGYNIVAQSGQQGVQTVDFQSYALAAERMQQQANPYPE
CCCCHHHHHHHHHHHHHHHHHHCCHHHHHCCCCCCCCEECHHHHHHHHHHHHHHCCCCCC
ISEAQAMWRSVHLWEQRMLNAPDPTAKLAVKAQYDQVGQIVGPYLYPPTLASIVAGLQLS
HHHHHHHHHHHHHHHHHHCCCCCCCHHEEEEEHHHHHHHHHCCCCCCHHHHHHHHCCHHC
GLGMATILSIATIIFVGFWLYLTNQSSAWTIWVILSMECLIGIVAGNIEFVLLLGSLVGG
CCHHHHHHHHHHHHHHHHHHHHCCCCCCEEEHHHHHHHHHHHHHHCCHHHHHHHHHHHHH
YWALYHSRLAAALIIALMLLIKPFYALFFVALALLAYCNLADQAARHALIKRIASIAAIA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHH
LGLIGLEIWRWDRALRQETFNYLTHTLEYQWFNFPAAEQSPMSMWNRTPLQGLINLGIAP
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCCHHHHHCCCHHHHHHHCCCCH
SVAQTLAFGLWLLVLGLSCWLVWRKQLGFTMLYGLSFILLYWGRPVGWSFSFIELIVLSL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHH
AWPWLKMWGKISLGSAMLGLIGSRWIALMLTAQAQGMPLNTLQTNTFAWESWLVLPLCLG
HHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHH
CLGYAIHQQSQQPSTLNKQQMVIN
HHHHHHHHCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MRFPWRRLGTIVGWLIFGAWVGFGYNIVAQSGQQGVQTVDFQSYALAAERMQQQANPYPE
CCCCHHHHHHHHHHHHHHHHHHCCHHHHHCCCCCCCCEECHHHHHHHHHHHHHHCCCCCC
ISEAQAMWRSVHLWEQRMLNAPDPTAKLAVKAQYDQVGQIVGPYLYPPTLASIVAGLQLS
HHHHHHHHHHHHHHHHHHCCCCCCCHHEEEEEHHHHHHHHHCCCCCCHHHHHHHHCCHHC
GLGMATILSIATIIFVGFWLYLTNQSSAWTIWVILSMECLIGIVAGNIEFVLLLGSLVGG
CCHHHHHHHHHHHHHHHHHHHHCCCCCCEEEHHHHHHHHHHHHHHCCHHHHHHHHHHHHH
YWALYHSRLAAALIIALMLLIKPFYALFFVALALLAYCNLADQAARHALIKRIASIAAIA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHH
LGLIGLEIWRWDRALRQETFNYLTHTLEYQWFNFPAAEQSPMSMWNRTPLQGLINLGIAP
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCCHHHHHCCCHHHHHHHCCCCH
SVAQTLAFGLWLLVLGLSCWLVWRKQLGFTMLYGLSFILLYWGRPVGWSFSFIELIVLSL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHH
AWPWLKMWGKISLGSAMLGLIGSRWIALMLTAQAQGMPLNTLQTNTFAWESWLVLPLCLG
HHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHH
CLGYAIHQQSQQPSTLNKQQMVIN
HHHHHHHHCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA