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The map label for this gene is rpe [H]

Identifier: 159898813

GI number: 159898813

Start: 2932012

End: 2932695

Strand: Direct

Name: rpe [H]

Synonym: Haur_2292

Alternate gene names: 159898813

Gene position: 2932012-2932695 (Clockwise)

Preceding gene: 159898812

Following gene: 159898814

Centisome position: 46.2

GC content: 51.75

Gene sequence:

>684_bases
ATGCCAATCGGATACCATGCTGGACGCGCTATCGAACTAACCCCATCAATTTTATCGGCCAATTTTGCCAACCTTGGAGC
CGATGTTCAAGCTGCCGACGAAGTGGGCTGTAGCTGGATTCAGGTCGATGTGATGGATGGACATTTTGTGCCCAACCTAA
CCTTTGGCCCACCCGTGATTCAGGCAATTCGGCCTTTTTTCAAAGGCACGTTGGATGTCCACTTGATGGTCAGCAACCCC
GATGCACTGCTTGAAGCATATGCCAAGGCCGGAGCTAACCATATCACAGTGCATCAAGAGGCGAGTGTGCATCTCCATCG
CACCATTCAGCGCATCCACGAGCTTGGTTGTACCGCAGGCGTAGCACTCAATCCAGCAACGCCGGTCAGCAGCCTCGACG
ATATTATTGAAGACCTCGATTTGGTATTAATTATGTCGGTCAATCCTGGTTTTGGTGGCCAGAGCTTTATCGAACGCAGC
TTGGCTAAAATTGCAGCCGTGCGAAGTTTACTCGATCAGCGTCACCATGAAGCGGTAATTCAGGTTGATGGGGGGGTTAA
ACCTAGCAATATCGCCAGCGTCGTGCAGGCAGGTGCGACTAACCTGATTGCAGGCTCGGCTTTTTACTCATCAACCATCA
CGCCCCACCAAGCGTGGGATGCTTTTGTCGCCGCTTTAGCATGA

Upstream 100 bases:

>100_bases
CCCGCTTATTGAAGGTTGAATTCTGATCGTGCTGCTGCCAAACGACTGGAAAATGTATGCTTTAATAGGGAGTGCCTAGT
TAAACACAACGAGGAGTTTT

Downstream 100 bases:

>100_bases
CTTAAGTCACCCACGAAATCACCCATGATAGGGAATGTCAATCTAGGAGTAATGGCCTATACTCGTTGGCATCTCCTTCT
CCTCTCTTCTCTCGCTAGAG

Product: ribulose-phosphate 3-epimerase

Products: NA

Alternate protein names: Pentose-5-phosphate 3-epimerase; PPE; R5P3E [H]

Number of amino acids: Translated: 227; Mature: 226

Protein sequence:

>227_residues
MPIGYHAGRAIELTPSILSANFANLGADVQAADEVGCSWIQVDVMDGHFVPNLTFGPPVIQAIRPFFKGTLDVHLMVSNP
DALLEAYAKAGANHITVHQEASVHLHRTIQRIHELGCTAGVALNPATPVSSLDDIIEDLDLVLIMSVNPGFGGQSFIERS
LAKIAAVRSLLDQRHHEAVIQVDGGVKPSNIASVVQAGATNLIAGSAFYSSTITPHQAWDAFVAALA

Sequences:

>Translated_227_residues
MPIGYHAGRAIELTPSILSANFANLGADVQAADEVGCSWIQVDVMDGHFVPNLTFGPPVIQAIRPFFKGTLDVHLMVSNP
DALLEAYAKAGANHITVHQEASVHLHRTIQRIHELGCTAGVALNPATPVSSLDDIIEDLDLVLIMSVNPGFGGQSFIERS
LAKIAAVRSLLDQRHHEAVIQVDGGVKPSNIASVVQAGATNLIAGSAFYSSTITPHQAWDAFVAALA
>Mature_226_residues
PIGYHAGRAIELTPSILSANFANLGADVQAADEVGCSWIQVDVMDGHFVPNLTFGPPVIQAIRPFFKGTLDVHLMVSNPD
ALLEAYAKAGANHITVHQEASVHLHRTIQRIHELGCTAGVALNPATPVSSLDDIIEDLDLVLIMSVNPGFGGQSFIERSL
AKIAAVRSLLDQRHHEAVIQVDGGVKPSNIASVVQAGATNLIAGSAFYSSTITPHQAWDAFVAALA

Specific function: Unknown

COG id: COG0036

COG function: function code G; Pentose-5-phosphate-3-epimerase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ribulose-phosphate 3-epimerase family [H]

Homologues:

Organism=Homo sapiens, GI40385883, Length=206, Percent_Identity=39.8058252427184, Blast_Score=152, Evalue=2e-37,
Organism=Homo sapiens, GI219879828, Length=208, Percent_Identity=37.5, Blast_Score=139, Evalue=2e-33,
Organism=Homo sapiens, GI24307923, Length=157, Percent_Identity=33.7579617834395, Blast_Score=87, Evalue=1e-17,
Organism=Escherichia coli, GI1789788, Length=199, Percent_Identity=49.2462311557789, Blast_Score=196, Evalue=1e-51,
Organism=Escherichia coli, GI1790523, Length=218, Percent_Identity=31.1926605504587, Blast_Score=126, Evalue=1e-30,
Organism=Escherichia coli, GI1790754, Length=200, Percent_Identity=31.5, Blast_Score=97, Evalue=8e-22,
Organism=Caenorhabditis elegans, GI17552948, Length=203, Percent_Identity=43.3497536945813, Blast_Score=162, Evalue=1e-40,
Organism=Saccharomyces cerevisiae, GI6322341, Length=221, Percent_Identity=35.2941176470588, Blast_Score=148, Evalue=6e-37,
Organism=Drosophila melanogaster, GI24586301, Length=197, Percent_Identity=39.0862944162437, Blast_Score=149, Evalue=2e-36,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013785
- InterPro:   IPR000056
- InterPro:   IPR011060 [H]

Pfam domain/function: PF00834 Ribul_P_3_epim [H]

EC number: =5.1.3.1 [H]

Molecular weight: Translated: 24013; Mature: 23881

Theoretical pI: Translated: 5.67; Mature: 5.67

Prosite motif: PS01086 RIBUL_P_3_EPIMER_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPIGYHAGRAIELTPSILSANFANLGADVQAADEVGCSWIQVDVMDGHFVPNLTFGPPVI
CCCCCCCCCEEEECHHHHHHHHHHCCCCCHHHHHCCCEEEEEEEECCCCCCCCCCCCHHH
QAIRPFFKGTLDVHLMVSNPDALLEAYAKAGANHITVHQEASVHLHRTIQRIHELGCTAG
HHHHHHHCCCEEEEEEECCHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHHHHCCCCCC
VALNPATPVSSLDDIIEDLDLVLIMSVNPGFGGQSFIERSLAKIAAVRSLLDQRHHEAVI
CEECCCCCHHHHHHHHHCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHCCEEE
QVDGGVKPSNIASVVQAGATNLIAGSAFYSSTITPHQAWDAFVAALA
EECCCCCHHHHHHHHHHCCHHHEECCHHHCCCCCCHHHHHHHHHHCC
>Mature Secondary Structure 
PIGYHAGRAIELTPSILSANFANLGADVQAADEVGCSWIQVDVMDGHFVPNLTFGPPVI
CCCCCCCCEEEECHHHHHHHHHHCCCCCHHHHHCCCEEEEEEEECCCCCCCCCCCCHHH
QAIRPFFKGTLDVHLMVSNPDALLEAYAKAGANHITVHQEASVHLHRTIQRIHELGCTAG
HHHHHHHCCCEEEEEEECCHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHHHHCCCCCC
VALNPATPVSSLDDIIEDLDLVLIMSVNPGFGGQSFIERSLAKIAAVRSLLDQRHHEAVI
CEECCCCCHHHHHHHHHCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHCCEEE
QVDGGVKPSNIASVVQAGATNLIAGSAFYSSTITPHQAWDAFVAALA
EECCCCCHHHHHHHHHHCCHHHEECCHHHCCCCCCHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8905231; 9298645 [H]