| Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
|---|---|
| Accession | NC_009972 |
| Length | 6,346,587 |
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The map label for this gene is ylxW [H]
Identifier: 159898804
GI number: 159898804
Start: 2923750
End: 2924499
Strand: Reverse
Name: ylxW [H]
Synonym: Haur_2283
Alternate gene names: 159898804
Gene position: 2924499-2923750 (Counterclockwise)
Preceding gene: 159898805
Following gene: 159898803
Centisome position: 46.08
GC content: 51.87
Gene sequence:
>750_bases ATGCGTCAACTATTACCTCAGCATCGTGCCATTTTGTCGCTGTTCGCTTTGCTCTTTGGCGGGTTGTTTGTCGGCATGCT CATGTCGGTACGACCCCAAGTGGCACTTTCGAGTAGTAGTAGTTCGCGCAATAGCTCAGCTAGTTTGAGCGTCGATCGCA TCGGTACGCTGCGTGAGCATCAGCAAGAATTAAATGCTGAACTCAGCCGTTTACGCGATGAACAAGCTGAGTTGCAACAA CAATCAACCTCCAGCCAAAGCAACTTTGAAGAAATTCGCACCCAAATCGATCAGCAGCAACAAATGGCAGCCTTGGTGGC GATGCGCGGGCCAGGCGTGGTTGTGACTCTCAACGATAGCAACGCCAATTCGTTACCCGATGAAGTTGCCGACGTGAATC GCTATATCATTCATCAGCAACAGCTGGTGACCTTGGTTGGCGTGCTGTGGAGCAACGGCGCTGAGGCAATTTCGATCAAC GATCAGCGCATCACCGATCAAACCTCGATCTATTGTGTTGGCTCAACGATTTTGATCAACCAAGAGTTAATGGCCCCGCC GTTTACGATTCGCGCAATCGGCGACCCCAACACCCTAGCTAATGCCGCCAGTAATTCGCCCTTGCTCAGCGATTTATGGA ATCGCCAGCGCGAATTTGGCATTGGTGTCGATGTTAAGCAAAAAGCCCAAGTGCAAGTGCCAGCCTACACTGGCCCCTTG GCCAATCGCCATCTGGAGGTTGCGCCATGA
Upstream 100 bases:
>100_bases CCTGGTTGTGCGGGCTGAACCACTAAGCCAAGAAACTCTGACTAGCAATAATACGCGCGAATTTACCATCCGCGTCGAGC CATAGTCTGCGGGAGCACCT
Downstream 100 bases:
>100_bases ACCGCTTTCGCATTCGGCGCGGGATTTTGCGCCAAAGCTTGTTGACCTTGATGTGTATGTTGATTGGCTTTGCGGTAGTG ACCCAACTGCGCACCTATGA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 249; Mature: 249
Protein sequence:
>249_residues MRQLLPQHRAILSLFALLFGGLFVGMLMSVRPQVALSSSSSSRNSSASLSVDRIGTLREHQQELNAELSRLRDEQAELQQ QSTSSQSNFEEIRTQIDQQQQMAALVAMRGPGVVVTLNDSNANSLPDEVADVNRYIIHQQQLVTLVGVLWSNGAEAISIN DQRITDQTSIYCVGSTILINQELMAPPFTIRAIGDPNTLANAASNSPLLSDLWNRQREFGIGVDVKQKAQVQVPAYTGPL ANRHLEVAP
Sequences:
>Translated_249_residues MRQLLPQHRAILSLFALLFGGLFVGMLMSVRPQVALSSSSSSRNSSASLSVDRIGTLREHQQELNAELSRLRDEQAELQQ QSTSSQSNFEEIRTQIDQQQQMAALVAMRGPGVVVTLNDSNANSLPDEVADVNRYIIHQQQLVTLVGVLWSNGAEAISIN DQRITDQTSIYCVGSTILINQELMAPPFTIRAIGDPNTLANAASNSPLLSDLWNRQREFGIGVDVKQKAQVQVPAYTGPL ANRHLEVAP >Mature_249_residues MRQLLPQHRAILSLFALLFGGLFVGMLMSVRPQVALSSSSSSRNSSASLSVDRIGTLREHQQELNAELSRLRDEQAELQQ QSTSSQSNFEEIRTQIDQQQQMAALVAMRGPGVVVTLNDSNANSLPDEVADVNRYIIHQQQLVTLVGVLWSNGAEAISIN DQRITDQTSIYCVGSTILINQELMAPPFTIRAIGDPNTLANAASNSPLLSDLWNRQREFGIGVDVKQKAQVQVPAYTGPL ANRHLEVAP
Specific function: May be involved in cell division and sporulation [H]
COG id: COG3879
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0749 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR010273 [H]
Pfam domain/function: PF05949 DUF881 [H]
EC number: NA
Molecular weight: Translated: 27300; Mature: 27300
Theoretical pI: Translated: 5.27; Mature: 5.27
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRQLLPQHRAILSLFALLFGGLFVGMLMSVRPQVALSSSSSSRNSSASLSVDRIGTLREH CCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCCCCCCCCCCEEHHHHHHHHHH QQELNAELSRLRDEQAELQQQSTSSQSNFEEIRTQIDQQQQMAALVAMRGPGVVVTLNDS HHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCC NANSLPDEVADVNRYIIHQQQLVTLVGVLWSNGAEAISINDQRITDQTSIYCVGSTILIN CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCEECCCCEEEEECCEEEEC QELMAPPFTIRAIGDPNTLANAASNSPLLSDLWNRQREFGIGVDVKQKAQVQVPAYTGPL HHHCCCCEEEEECCCCHHHHHCCCCCCHHHHHHHHHHHCCCCCCCCCCCEEECCCCCCCC ANRHLEVAP CCCEEECCC >Mature Secondary Structure MRQLLPQHRAILSLFALLFGGLFVGMLMSVRPQVALSSSSSSRNSSASLSVDRIGTLREH CCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCCCCCCCCCCEEHHHHHHHHHH QQELNAELSRLRDEQAELQQQSTSSQSNFEEIRTQIDQQQQMAALVAMRGPGVVVTLNDS HHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCC NANSLPDEVADVNRYIIHQQQLVTLVGVLWSNGAEAISINDQRITDQTSIYCVGSTILIN CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCEECCCCEEEEECCEEEEC QELMAPPFTIRAIGDPNTLANAASNSPLLSDLWNRQREFGIGVDVKQKAQVQVPAYTGPL HHHCCCCEEEEECCCCHHHHHCCCCCCHHHHHHHHHHHCCCCCCCCCCCEEECCCCCCCC ANRHLEVAP CCCEEECCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 2556375; 9384377; 12207695 [H]