| Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
|---|---|
| Accession | NC_009972 |
| Length | 6,346,587 |
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The map label for this gene is livK [C]
Identifier: 159898789
GI number: 159898789
Start: 2901520
End: 2902761
Strand: Direct
Name: livK [C]
Synonym: Haur_2268
Alternate gene names: 159898789
Gene position: 2901520-2902761 (Clockwise)
Preceding gene: 159898788
Following gene: 159898791
Centisome position: 45.72
GC content: 48.95
Gene sequence:
>1242_bases ATGTGGCAACAACGCTGTTGGCTTCGACGCTTAGCTTATTTGATGATCATCGGTTTGTTAGGCGGTTGTATCAGCACCAG TGCCAACCAACAACCGCTGGTGATCACCTTTGGCGCATCGATCTCGATTACTGGCAAAACCGCCAAAGAAGGCGAATATG TGCGTGATGGGTATCAATTTTTTGTTGATACCCTGAATGCCCAAGGTGGGATTCTGGTCGGCGGCCAACGCTATCAGTTG CGTTTACGTTATTATGATGATGAATCGAACCTCGAACGCACAGCTGAGCTGTATGAAAAATTAATCAATCACGATCAAGT TGATTTTTTATTGGGGCCATATGGCTCGGATGCTACCAGCGTTGCGGTAGCGATCGCCGAAAAATATCATATTCCATTGG TTTCGGGCCATGGCTCGGCCAGCAGCATTTATGCCAATAACTATCACTATATTTTCAGTGTGCAAACGCCCGCCCGCCAC TACTTAAACGGAGTGATGGATGCAGTATTGGCGGCTGACCCAAGCCTCAAAACGCTGGCCCTGTTGAGCGAAACCGATTC GTTTTCGCAGGATGTCGCCCAAGGTGTGCGTGATTACGCCCAACAGCGCGGCTTAAACGTGGTTTATCATGGCGATTATC CCAGCGATGCGCGTGATGTGAGTCATCATTTAAATATCATTAAGCAACTTCAGCCCGATATGTTGCTCGGTGCAGGTCAT CTGCAAGAGGCTTTGTTAATTGTCAAGCAAGCCAAAAGCCTCGATCTTAGCCCTAAAGCAATTGGATTAAGTGTGGGGCC ATTATTGCCGCAATTTCGCGCTAATTTACAACATGATGCCGATTATATCCTTGGCCCAACCCAATGGACTCCTGCCCTCG ACTATCATGGCGATGATAGCTGGCAAACCCCAGCGGCTTTTGCCCAAGCCTTTCGTCAGCAATACCCCCAATATAAATCG GTGCCCTATCAAGTTGCTGAGTCGGCGGCATCATTGATCGTCTTTCAACGGGCCTTTGAGCGGGCAGGAACGATCGATCG CTTAGCGGTGCGCGATACAATTAAAGGCTTAAAACTTGATACTTTTTTCGGGCCGATTCAATTTGACGCGCAGGGCGTAA ACAGCGAAAAGCCCATGGCAGTTGAGCAGTTGCATCCTGATGGTCAAAAATATACGGTATTTCCCCAAGCCGTGGCCGAA CAACCACTGTTGTATCCCATGCCCACGTGGAGTCAACGCTAG
Upstream 100 bases:
>100_bases TGGTCGAGACCTTGGATTACACCAGTGGCAATGTGCGAATTTATTTGCCGCCTGAAGCATTGATGGTCTTGAAAGCGGCT TAAAGCATACGAGGTCGGTT
Downstream 100 bases:
>100_bases CAGCTTTATTTGATTGTGGTGTGGACATAAATTTATCGGTGCATTGGCATAGCAGCAAGGCCATTCAGCGAACAAATGCC CTGCGATAGGTGGGGCGTTC
Product: extracellular ligand-binding receptor
Products: ADP; phosphate; L-leucine [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 413; Mature: 413
Protein sequence:
>413_residues MWQQRCWLRRLAYLMIIGLLGGCISTSANQQPLVITFGASISITGKTAKEGEYVRDGYQFFVDTLNAQGGILVGGQRYQL RLRYYDDESNLERTAELYEKLINHDQVDFLLGPYGSDATSVAVAIAEKYHIPLVSGHGSASSIYANNYHYIFSVQTPARH YLNGVMDAVLAADPSLKTLALLSETDSFSQDVAQGVRDYAQQRGLNVVYHGDYPSDARDVSHHLNIIKQLQPDMLLGAGH LQEALLIVKQAKSLDLSPKAIGLSVGPLLPQFRANLQHDADYILGPTQWTPALDYHGDDSWQTPAAFAQAFRQQYPQYKS VPYQVAESAASLIVFQRAFERAGTIDRLAVRDTIKGLKLDTFFGPIQFDAQGVNSEKPMAVEQLHPDGQKYTVFPQAVAE QPLLYPMPTWSQR
Sequences:
>Translated_413_residues MWQQRCWLRRLAYLMIIGLLGGCISTSANQQPLVITFGASISITGKTAKEGEYVRDGYQFFVDTLNAQGGILVGGQRYQL RLRYYDDESNLERTAELYEKLINHDQVDFLLGPYGSDATSVAVAIAEKYHIPLVSGHGSASSIYANNYHYIFSVQTPARH YLNGVMDAVLAADPSLKTLALLSETDSFSQDVAQGVRDYAQQRGLNVVYHGDYPSDARDVSHHLNIIKQLQPDMLLGAGH LQEALLIVKQAKSLDLSPKAIGLSVGPLLPQFRANLQHDADYILGPTQWTPALDYHGDDSWQTPAAFAQAFRQQYPQYKS VPYQVAESAASLIVFQRAFERAGTIDRLAVRDTIKGLKLDTFFGPIQFDAQGVNSEKPMAVEQLHPDGQKYTVFPQAVAE QPLLYPMPTWSQR >Mature_413_residues MWQQRCWLRRLAYLMIIGLLGGCISTSANQQPLVITFGASISITGKTAKEGEYVRDGYQFFVDTLNAQGGILVGGQRYQL RLRYYDDESNLERTAELYEKLINHDQVDFLLGPYGSDATSVAVAIAEKYHIPLVSGHGSASSIYANNYHYIFSVQTPARH YLNGVMDAVLAADPSLKTLALLSETDSFSQDVAQGVRDYAQQRGLNVVYHGDYPSDARDVSHHLNIIKQLQPDMLLGAGH LQEALLIVKQAKSLDLSPKAIGLSVGPLLPQFRANLQHDADYILGPTQWTPALDYHGDDSWQTPAAFAQAFRQQYPQYKS VPYQVAESAASLIVFQRAFERAGTIDRLAVRDTIKGLKLDTFFGPIQFDAQGVNSEKPMAVEQLHPDGQKYTVFPQAVAE QPLLYPMPTWSQR
Specific function: Component of an amino-acid transport system (Potential) [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Periplasmic Protein [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the leucine-binding protein family [H]
Homologues:
Organism=Escherichia coli, GI1789867, Length=390, Percent_Identity=23.0769230769231, Blast_Score=63, Evalue=3e-11,
Paralogues:
None
Copy number: 240 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001828 [H]
Pfam domain/function: PF01094 ANF_receptor [H]
EC number: NA
Molecular weight: Translated: 45945; Mature: 45945
Theoretical pI: Translated: 6.23; Mature: 6.23
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MWQQRCWLRRLAYLMIIGLLGGCISTSANQQPLVITFGASISITGKTAKEGEYVRDGYQF CCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCEEEEECCCCCCCCHHHHHHHH FVDTLNAQGGILVGGQRYQLRLRYYDDESNLERTAELYEKLINHDQVDFLLGPYGSDATS HHHHHCCCCCEEECCCEEEEEEEEECCCCHHHHHHHHHHHHHCCCCEEEEECCCCCCHHH VAVAIAEKYHIPLVSGHGSASSIYANNYHYIFSVQTPARHYLNGVMDAVLAADPSLKTLA HHHEEHHHHCCEEEECCCCCCEEEECCEEEEEEECCCHHHHHHHHHHHHHHCCCCHHHHH LLSETDSFSQDVAQGVRDYAQQRGLNVVYHGDYPSDARDVSHHLNIIKQLQPDMLLGAGH HHHCCCHHHHHHHHHHHHHHHHCCCEEEECCCCCCHHHHHHHHHHHHHHCCCCCEECCHH LQEALLIVKQAKSLDLSPKAIGLSVGPLLPQFRANLQHDADYILGPTQWTPALDYHGDDS HHHHHHHHHHHHCCCCCCHHCCEEHHCCCHHHHHCCCCCCCEEECCCCCCCCCCCCCCCC WQTPAAFAQAFRQQYPQYKSVPYQVAESAASLIVFQRAFERAGTIDRLAVRDTIKGLKLD CCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCEEE TFFGPIQFDAQGVNSEKPMAVEQLHPDGQKYTVFPQAVAEQPLLYPMPTWSQR EEECCEEECCCCCCCCCCCCHHHCCCCCCEEEECHHHHHCCCCEECCCCCCCC >Mature Secondary Structure MWQQRCWLRRLAYLMIIGLLGGCISTSANQQPLVITFGASISITGKTAKEGEYVRDGYQF CCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCEEEEECCCCCCCCHHHHHHHH FVDTLNAQGGILVGGQRYQLRLRYYDDESNLERTAELYEKLINHDQVDFLLGPYGSDATS HHHHHCCCCCEEECCCEEEEEEEEECCCCHHHHHHHHHHHHHCCCCEEEEECCCCCCHHH VAVAIAEKYHIPLVSGHGSASSIYANNYHYIFSVQTPARHYLNGVMDAVLAADPSLKTLA HHHEEHHHHCCEEEECCCCCCEEEECCEEEEEEECCCHHHHHHHHHHHHHHCCCCHHHHH LLSETDSFSQDVAQGVRDYAQQRGLNVVYHGDYPSDARDVSHHLNIIKQLQPDMLLGAGH HHHCCCHHHHHHHHHHHHHHHHCCCEEEECCCCCCHHHHHHHHHHHHHHCCCCCEECCHH LQEALLIVKQAKSLDLSPKAIGLSVGPLLPQFRANLQHDADYILGPTQWTPALDYHGDDS HHHHHHHHHHHHCCCCCCHHCCEEHHCCCHHHHHCCCCCCCEEECCCCCCCCCCCCCCCC WQTPAAFAQAFRQQYPQYKSVPYQVAESAASLIVFQRAFERAGTIDRLAVRDTIKGLKLD CCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCEEE TFFGPIQFDAQGVNSEKPMAVEQLHPDGQKYTVFPQAVAEQPLLYPMPTWSQR EEECCEEECCCCCCCCCCCCHHHCCCCCCEEEECHHHHHCCCCEECCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; L-leucine [Periplasm]; H2O [C]
Specific reaction: ATP + L-leucine [Periplasm] + H2O = ADP + phosphate + L-leucine [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA