| Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
|---|---|
| Accession | NC_009972 |
| Length | 6,346,587 |
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The map label for this gene is 159898738
Identifier: 159898738
GI number: 159898738
Start: 2816608
End: 2817996
Strand: Direct
Name: 159898738
Synonym: Haur_2217
Alternate gene names: NA
Gene position: 2816608-2817996 (Clockwise)
Preceding gene: 159898737
Following gene: 159898742
Centisome position: 44.38
GC content: 50.18
Gene sequence:
>1389_bases ATGCTTTTTCCACCGACCAATCAGCATGGGCCGCTAGCCCGCTGTATTGTGGTCAAATTCCACGATCAGCAGGCTCCGCT AATCTATACCGATCAAAATTTTCAAGGCTATGTTGTTCAACCGCTCTTTAACAGCGTCGATCCTGATCAATTAGTTGGCT TAGTTCAGCAAGCCCAGCAAACTAACCCAGAATATCAAGCACCAAATTTTTTGGCCTTCTTTGCGATTGATGTTGAGCCA GACCAAGATCCCTTTGCAATCATTGAGGAAATTAACCAATGGGCAGAACTTGAGTATGCCTATGTTGAATCGCCGCCAGC ACCTGTGCCCACTGATGCTAACCCTCGCCGCGCACGCCAAACCTATCTCAACCCACCAAGCAGCACTGGCCCAACCATTG GCGGCATCGATGCTGAAGCGGCTTGGAAGGTTTTAGAGCATGCAGGCAAAGCCATCACGATTGTGGATATTGAGAAATCA TGGCAATTAGAACACCCCGATTTGCTGCAACATGGCAGTTCGCCGATTACGATCTTGCCCTCACTGCTGCATTGTGATAT GCATGATCCCGCTTGTGCTGATCATGGCACGAATGTTTTAGGTGTGCTGGTGGCCCAAAATAATACTGAGGGTGGAGTTG GAATCGCTCACGACGCAGCAGCAGCAGTCATTTCGCCCTGGCAAAAACCAAGCAATGGCACCAACCAACCAAGCTGGAAT ATCGCCAATGCGATTGTCGCCGCAAGCAACTACTTAACAACACTTGAATTATCAGGTAATCTGATCCTGCTAGAATTGCA AATCTACCAAGATCTGGCTGGCGGACCCTACACCAACACGCCCAATCAACCAGGCAGATTGCTACCAGTCGAATTAGAAC CAGCCAATTTCGAGGCCATTCGGTTGGCGAGCGAACTGGGCATTATTGTGATCGAGGCTGCTGGAAATGGCGCTAGCGAT TTGGCAACGTGTTGGGATACCGTGGGAACATATCAAATTGAGCCAGAAACAGCCCGTTATCGTGATTCTGGGGCAATTCT AGTTGGAGCGGTTTACAGTCGCGACCCCAATAAAGCAACGCGAACCGCTAGCTCCAACTATGGACAACGGGTCAATTGCT TCGCTTGGGGCAATGGTGTATTTACCACCAATGCTTCGGGCTATAGCTTAAGCTTTGGCGGAACATCAGCAGCAGCAGCG ATTATTGCCGGAGCCGCCATTTTAGCGCAAGCAATTGGCGAACAGCTGCGCCAAGCACGATTCAGCCCCGAGGAATTACG CAGGTTGCTTACCCACCCAGATGCCTGTACCTATTCAGCCCAGCCCCAACATGATCGGGTTGGCGTTATGCCAGATCTAG GGCGCATTATTGGCTTGTTGCAGGTTTAA
Upstream 100 bases:
>100_bases CAAAGCCAGCCCAAGCCCAAGCACCACGCCAATTGATATAACACTCACGCCCAACGACGAATAAATTTACACCCATAATT CACACCAAATGAGGTCAATG
Downstream 100 bases:
>100_bases ACCTTGTTGAATGTCAATCGGCTTGAGCGTTGTGAGCAGGAGATAAAGCAGATCAATCACTCAAACTGCTCAAGCTGCGC ATCGTTAAAGCAGCGCTCTA
Product: peptidase S8/S53 subtilisin kexin sedolisin
Products: NA
Alternate protein names: Serine Protease Subtilase Family; Fibronectin Type III Domain-Containing Protein; Peptidase S8/S53 Subtilisin Kexin Sedolisin; Microbial Collagenase
Number of amino acids: Translated: 462; Mature: 462
Protein sequence:
>462_residues MLFPPTNQHGPLARCIVVKFHDQQAPLIYTDQNFQGYVVQPLFNSVDPDQLVGLVQQAQQTNPEYQAPNFLAFFAIDVEP DQDPFAIIEEINQWAELEYAYVESPPAPVPTDANPRRARQTYLNPPSSTGPTIGGIDAEAAWKVLEHAGKAITIVDIEKS WQLEHPDLLQHGSSPITILPSLLHCDMHDPACADHGTNVLGVLVAQNNTEGGVGIAHDAAAAVISPWQKPSNGTNQPSWN IANAIVAASNYLTTLELSGNLILLELQIYQDLAGGPYTNTPNQPGRLLPVELEPANFEAIRLASELGIIVIEAAGNGASD LATCWDTVGTYQIEPETARYRDSGAILVGAVYSRDPNKATRTASSNYGQRVNCFAWGNGVFTTNASGYSLSFGGTSAAAA IIAGAAILAQAIGEQLRQARFSPEELRRLLTHPDACTYSAQPQHDRVGVMPDLGRIIGLLQV
Sequences:
>Translated_462_residues MLFPPTNQHGPLARCIVVKFHDQQAPLIYTDQNFQGYVVQPLFNSVDPDQLVGLVQQAQQTNPEYQAPNFLAFFAIDVEP DQDPFAIIEEINQWAELEYAYVESPPAPVPTDANPRRARQTYLNPPSSTGPTIGGIDAEAAWKVLEHAGKAITIVDIEKS WQLEHPDLLQHGSSPITILPSLLHCDMHDPACADHGTNVLGVLVAQNNTEGGVGIAHDAAAAVISPWQKPSNGTNQPSWN IANAIVAASNYLTTLELSGNLILLELQIYQDLAGGPYTNTPNQPGRLLPVELEPANFEAIRLASELGIIVIEAAGNGASD LATCWDTVGTYQIEPETARYRDSGAILVGAVYSRDPNKATRTASSNYGQRVNCFAWGNGVFTTNASGYSLSFGGTSAAAA IIAGAAILAQAIGEQLRQARFSPEELRRLLTHPDACTYSAQPQHDRVGVMPDLGRIIGLLQV >Mature_462_residues MLFPPTNQHGPLARCIVVKFHDQQAPLIYTDQNFQGYVVQPLFNSVDPDQLVGLVQQAQQTNPEYQAPNFLAFFAIDVEP DQDPFAIIEEINQWAELEYAYVESPPAPVPTDANPRRARQTYLNPPSSTGPTIGGIDAEAAWKVLEHAGKAITIVDIEKS WQLEHPDLLQHGSSPITILPSLLHCDMHDPACADHGTNVLGVLVAQNNTEGGVGIAHDAAAAVISPWQKPSNGTNQPSWN IANAIVAASNYLTTLELSGNLILLELQIYQDLAGGPYTNTPNQPGRLLPVELEPANFEAIRLASELGIIVIEAAGNGASD LATCWDTVGTYQIEPETARYRDSGAILVGAVYSRDPNKATRTASSNYGQRVNCFAWGNGVFTTNASGYSLSFGGTSAAAA IIAGAAILAQAIGEQLRQARFSPEELRRLLTHPDACTYSAQPQHDRVGVMPDLGRIIGLLQV
Specific function: Unknown
COG id: COG1404
COG function: function code O; Subtilisin-like serine proteases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 49729; Mature: 49729
Theoretical pI: Translated: 4.43; Mature: 4.43
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 0.6 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLFPPTNQHGPLARCIVVKFHDQQAPLIYTDQNFQGYVVQPLFNSVDPDQLVGLVQQAQQ CCCCCCCCCCCEEEEEEEEEECCCCCEEEECCCCCCEEEEHHHCCCCHHHHHHHHHHHHH TNPEYQAPNFLAFFAIDVEPDQDPFAIIEEINQWAELEYAYVESPPAPVPTDANPRRARQ CCCCCCCCCEEEEEEEEECCCCCHHHHHHHHHHHHHEEEEEECCCCCCCCCCCCHHHHHH TYLNPPSSTGPTIGGIDAEAAWKVLEHAGKAITIVDIEKSWQLEHPDLLQHGSSPITILP HHCCCCCCCCCCCCCCCHHHHHHHHHHCCCEEEEEEECCCCCCCCCHHHHCCCCCCEEEC SLLHCDMHDPACADHGTNVLGVLVAQNNTEGGVGIAHDAAAAVISPWQKPSNGTNQPSWN HHHHCCCCCCCCCCCCCCEEEEEEECCCCCCCCEECHHHHHHHHCCCCCCCCCCCCCCCH IANAIVAASNYLTTLELSGNLILLELQIYQDLAGGPYTNTPNQPGRLLPVELEPANFEAI HHHHHHHHCCCEEEEEECCCEEEEEEEEHHHHCCCCCCCCCCCCCCEEEEEECCCCCHHE RLASELGIIVIEAAGNGASDLATCWDTVGTYQIEPETARYRDSGAILVGAVYSRDPNKAT EEHHHCCEEEEEECCCCHHHHHHHHHCCCCEEECCCHHCCCCCCCEEEEEEECCCCCHHH RTASSNYGQRVNCFAWGNGVFTTNASGYSLSFGGTSAAAAIIAGAAILAQAIGEQLRQAR HCCCCCCCCEEEEEEECCEEEEECCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHC FSPEELRRLLTHPDACTYSAQPQHDRVGVMPDLGRIIGLLQV CCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCC >Mature Secondary Structure MLFPPTNQHGPLARCIVVKFHDQQAPLIYTDQNFQGYVVQPLFNSVDPDQLVGLVQQAQQ CCCCCCCCCCCEEEEEEEEEECCCCCEEEECCCCCCEEEEHHHCCCCHHHHHHHHHHHHH TNPEYQAPNFLAFFAIDVEPDQDPFAIIEEINQWAELEYAYVESPPAPVPTDANPRRARQ CCCCCCCCCEEEEEEEEECCCCCHHHHHHHHHHHHHEEEEEECCCCCCCCCCCCHHHHHH TYLNPPSSTGPTIGGIDAEAAWKVLEHAGKAITIVDIEKSWQLEHPDLLQHGSSPITILP HHCCCCCCCCCCCCCCCHHHHHHHHHHCCCEEEEEEECCCCCCCCCHHHHCCCCCCEEEC SLLHCDMHDPACADHGTNVLGVLVAQNNTEGGVGIAHDAAAAVISPWQKPSNGTNQPSWN HHHHCCCCCCCCCCCCCCEEEEEEECCCCCCCCEECHHHHHHHHCCCCCCCCCCCCCCCH IANAIVAASNYLTTLELSGNLILLELQIYQDLAGGPYTNTPNQPGRLLPVELEPANFEAI HHHHHHHHCCCEEEEEECCCEEEEEEEEHHHHCCCCCCCCCCCCCCEEEEEECCCCCHHE RLASELGIIVIEAAGNGASDLATCWDTVGTYQIEPETARYRDSGAILVGAVYSRDPNKAT EEHHHCCEEEEEECCCCHHHHHHHHHCCCCEEECCCHHCCCCCCCEEEEEEECCCCCHHH RTASSNYGQRVNCFAWGNGVFTTNASGYSLSFGGTSAAAAIIAGAAILAQAIGEQLRQAR HCCCCCCCCEEEEEEECCEEEEECCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHC FSPEELRRLLTHPDACTYSAQPQHDRVGVMPDLGRIIGLLQV CCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA