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The map label for this gene is torT [H]

Identifier: 159898732

GI number: 159898732

Start: 2810163

End: 2811302

Strand: Reverse

Name: torT [H]

Synonym: Haur_2211

Alternate gene names: 159898732

Gene position: 2811302-2810163 (Counterclockwise)

Preceding gene: 159898733

Following gene: 159898731

Centisome position: 44.3

GC content: 49.04

Gene sequence:

>1140_bases
ATGCAGACTGCAACCAAACGCTCAAAATGGGTTCTTGGCAGTTTATTGGCCGCTAGTTTGGCCGCTTGTGGCACGGCTCA
GCCAACCGCCCAACCAACATCCGTGCCTAGTGCAACCGTCGCGCTCAGCCAAACCAGCACCAGCACCAGCTATCAAGTTG
AAGTCTGGAATCCACCATTCGATTTTGCTAGCCCCCGTACATCAACCGACTATGTGCCCTTGGTTGTGGCCGATAAGGCT
GAGACAATTTGTGTTTCAATTCCGCACATCAAGGATAGCTATTGGTTGGCCGTTAATTATGGTGTAGTTTCCGAAGCCGA
ACGCTTAGGCATCAATGTGGAAATTGTTGAAGCTGGTGGCTATGGTAATTTGCCAACCCAAATTACCCAAATTCGCCAAT
GTGTGGCTAACGGAGCCAAGGCTGTGGTGATTGGGGCAATCTCGCTTGATGGCCTCAACGATTTAATTGTTGAGCTACAA
AGCCAAAAGATTCCCGTGATTGCCTTTATGAATGATATTTCGTCGAAGGCCATTACCGCCAAATCGCTATCGGTGCCAGG
CGAAGGCGGCCAAGAAATTGCTAAATATTTAGTGCAAAAACATGCCAAGGGCAGTGATGCTGTGGATGTCGCTTGGTTCC
CTGGCCCCGAAAAGGCTGGCTGGTCGAAAGCCGCCGATGAAAAATTTAAGGCTACTATTACTGGTGGCGCAATTAACATT
GTCGAAACCAAATATGGCGATACTGGCAAAGAAGAGCAGGCAAAATTGATCGAAGAGGTCTTGATCGCACATCCCGAGAT
CGATTATATTGTAGGTACTGGCCAAACTGCGGTAACTGCTGCCGAAATTCTGCGCGAACGCAAGCTGCAAGATAAAATCA
AAATTATGGCATATTACATCAGTCCAGAAGTGTATGCTGAATTGCAGAGTGGTGGTATCCAAGCAGCGGCGGTGGCTCCC
CCAGTTACGATTGCGCGAATAGCCATCGATCAAACGGTGCGCATTTTGGAAGGCAAAGAATTCATGGCCCATGTTGGCCC
GAAGAGCTTCGTGATCGATACAGCATCGCTCACCAGCTTTGATCCGACGACTTCGATCCCACCCGAAACGTTCAAAATTA
CGCTGCGTGTGTCGCAATAG

Upstream 100 bases:

>100_bases
TAGGCCTGCCCATCTTTGTTTGTTTAGCCACGCTTCCCCACAATGCCCGCCTCATGCTCTCAACATTGTTGCACTAGGGT
TTAAGTAAGAAGGAGATCCT

Downstream 100 bases:

>100_bases
GTTGTTGTAGGTGGAGGATGGACGATGCTCCATAGTTTACGCAGGCAAGTTATTGTTATCCTCTTATTGGGAACATCGCT
CTTGGCGTTGCTCAATTTAG

Product: TMAO reductase system periplasmic protein TorT

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 379; Mature: 379

Protein sequence:

>379_residues
MQTATKRSKWVLGSLLAASLAACGTAQPTAQPTSVPSATVALSQTSTSTSYQVEVWNPPFDFASPRTSTDYVPLVVADKA
ETICVSIPHIKDSYWLAVNYGVVSEAERLGINVEIVEAGGYGNLPTQITQIRQCVANGAKAVVIGAISLDGLNDLIVELQ
SQKIPVIAFMNDISSKAITAKSLSVPGEGGQEIAKYLVQKHAKGSDAVDVAWFPGPEKAGWSKAADEKFKATITGGAINI
VETKYGDTGKEEQAKLIEEVLIAHPEIDYIVGTGQTAVTAAEILRERKLQDKIKIMAYYISPEVYAELQSGGIQAAAVAP
PVTIARIAIDQTVRILEGKEFMAHVGPKSFVIDTASLTSFDPTTSIPPETFKITLRVSQ

Sequences:

>Translated_379_residues
MQTATKRSKWVLGSLLAASLAACGTAQPTAQPTSVPSATVALSQTSTSTSYQVEVWNPPFDFASPRTSTDYVPLVVADKA
ETICVSIPHIKDSYWLAVNYGVVSEAERLGINVEIVEAGGYGNLPTQITQIRQCVANGAKAVVIGAISLDGLNDLIVELQ
SQKIPVIAFMNDISSKAITAKSLSVPGEGGQEIAKYLVQKHAKGSDAVDVAWFPGPEKAGWSKAADEKFKATITGGAINI
VETKYGDTGKEEQAKLIEEVLIAHPEIDYIVGTGQTAVTAAEILRERKLQDKIKIMAYYISPEVYAELQSGGIQAAAVAP
PVTIARIAIDQTVRILEGKEFMAHVGPKSFVIDTASLTSFDPTTSIPPETFKITLRVSQ
>Mature_379_residues
MQTATKRSKWVLGSLLAASLAACGTAQPTAQPTSVPSATVALSQTSTSTSYQVEVWNPPFDFASPRTSTDYVPLVVADKA
ETICVSIPHIKDSYWLAVNYGVVSEAERLGINVEIVEAGGYGNLPTQITQIRQCVANGAKAVVIGAISLDGLNDLIVELQ
SQKIPVIAFMNDISSKAITAKSLSVPGEGGQEIAKYLVQKHAKGSDAVDVAWFPGPEKAGWSKAADEKFKATITGGAINI
VETKYGDTGKEEQAKLIEEVLIAHPEIDYIVGTGQTAVTAAEILRERKLQDKIKIMAYYISPEVYAELQSGGIQAAAVAP
PVTIARIAIDQTVRILEGKEFMAHVGPKSFVIDTASLTSFDPTTSIPPETFKITLRVSQ

Specific function: Upon binding a putative inducer it probably interacts with torS and allows it to play a role in the induction of the torCAD operon for trimethylamine N-oxide reductase [H]

COG id: COG1879

COG function: function code G; ABC-type sugar transport system, periplasmic component

Gene ontology:

Cell location: Periplasm [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the bacterial solute-binding protein 2 family [H]

Homologues:

Organism=Escherichia coli, GI1787228, Length=298, Percent_Identity=34.2281879194631, Blast_Score=158, Evalue=4e-40,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001761
- InterPro:   IPR014301 [H]

Pfam domain/function: PF00532 Peripla_BP_1 [H]

EC number: NA

Molecular weight: Translated: 40392; Mature: 40392

Theoretical pI: Translated: 5.10; Mature: 5.10

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQTATKRSKWVLGSLLAASLAACGTAQPTAQPTSVPSATVALSQTSTSTSYQVEVWNPPF
CCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEEECCCCCEEEEEEECCCC
DFASPRTSTDYVPLVVADKAETICVSIPHIKDSYWLAVNYGVVSEAERLGINVEIVEAGG
CCCCCCCCCCEEEEEEECCCCEEEEECCCCCCCEEEEEECCCHHHHHHCCCEEEEEECCC
YGNLPTQITQIRQCVANGAKAVVIGAISLDGLNDLIVELQSQKIPVIAFMNDISSKAITA
CCCCCHHHHHHHHHHHCCCCEEEEEEEECCCHHHHHHHHHCCCCCEEEEECCCCCCEEEE
KSLSVPGEGGQEIAKYLVQKHAKGSDAVDVAWFPGPEKAGWSKAADEKFKATITGGAINI
EECCCCCCCHHHHHHHHHHHCCCCCCCEEEEECCCCCCCCCCCCCCCCEEEEEECCEEEE
VETKYGDTGKEEQAKLIEEVLIAHPEIDYIVGTGQTAVTAAEILRERKLQDKIKIMAYYI
EEECCCCCCCHHHHHHHHHHHHCCCCCCEEEECCCHHHHHHHHHHHHHHHHHEEEEEEEE
SPEVYAELQSGGIQAAAVAPPVTIARIAIDQTVRILEGKEFMAHVGPKSFVIDTASLTSF
CHHHHHHHHCCCEEEEECCCCCEEEEEHHHHHHHHHCCCHHHHHCCCCCEEEEECCCCCC
DPTTSIPPETFKITLRVSQ
CCCCCCCCCEEEEEEEECC
>Mature Secondary Structure
MQTATKRSKWVLGSLLAASLAACGTAQPTAQPTSVPSATVALSQTSTSTSYQVEVWNPPF
CCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEEECCCCCEEEEEEECCCC
DFASPRTSTDYVPLVVADKAETICVSIPHIKDSYWLAVNYGVVSEAERLGINVEIVEAGG
CCCCCCCCCCEEEEEEECCCCEEEEECCCCCCCEEEEEECCCHHHHHHCCCEEEEEECCC
YGNLPTQITQIRQCVANGAKAVVIGAISLDGLNDLIVELQSQKIPVIAFMNDISSKAITA
CCCCCHHHHHHHHHHHCCCCEEEEEEEECCCHHHHHHHHHCCCCCEEEEECCCCCCEEEE
KSLSVPGEGGQEIAKYLVQKHAKGSDAVDVAWFPGPEKAGWSKAADEKFKATITGGAINI
EECCCCCCCHHHHHHHHHHHCCCCCCCEEEEECCCCCCCCCCCCCCCCEEEEEECCEEEE
VETKYGDTGKEEQAKLIEEVLIAHPEIDYIVGTGQTAVTAAEILRERKLQDKIKIMAYYI
EEECCCCCCCHHHHHHHHHHHHCCCCCCEEEECCCHHHHHHHHHHHHHHHHHEEEEEEEE
SPEVYAELQSGGIQAAAVAPPVTIARIAIDQTVRILEGKEFMAHVGPKSFVIDTASLTSF
CHHHHHHHHCCCEEEEECCCCCEEEEEHHHHHHHHHCCCHHHHHCCCCCEEEEECCCCCC
DPTTSIPPETFKITLRVSQ
CCCCCCCCCEEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]