| Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
|---|---|
| Accession | NC_009972 |
| Length | 6,346,587 |
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The map label for this gene is 159898671
Identifier: 159898671
GI number: 159898671
Start: 2708285
End: 2709319
Strand: Reverse
Name: 159898671
Synonym: Haur_2150
Alternate gene names: NA
Gene position: 2709319-2708285 (Counterclockwise)
Preceding gene: 159898672
Following gene: 159898663
Centisome position: 42.69
GC content: 48.02
Gene sequence:
>1035_bases ATGCGTTGGATCATATTTCTTGGAATTATTGCTAGTTTAATCGGTTGTGGCTCAGTGCAATCAACCGCTGTGCCAACTTC TGTGCCAACTTTCGGTTCGCAAGGTTGGCGTTTGAGTTATGTGCAACAACCATTAACATCTGCCCATTTGATCATCAGTG GTGTTGCTGGATTTCGGACAATTGGCGCGGCAGTCAATGGCCCTGCTTGCTTCAGTCAAGGTCGTTTGGTCTATACCACG GCGACCAGCACAACCAAGCGTTTGGTTGCAAGTAATTTAGCCAATTTGCAAACCCAAATTTTGGTTGATGATCCTGAGGC GGTATTGAGTCAAGCCACATGTCATCCTACCAATGATCAACTGCTTTATTTGCGTTCGCCATTGGCCTTGATTGATGACG AGCCTGCGCCGCCCAGCATCTGGCAAATCAGCGCCAATTTGAGCCAGCCCCAAAGCTTGGATGTCGATCAAACGCCAGCT TTGAATCAACAATGGTCACCCGATGGGAATTGGTTGATCTATGAATTGGCTGATCGACCGCAATTGGTGCTGCAAGATGT TACTGGAGTAACCCGCGAATTAACCTTGACTGGGACGTTTACTTGGCAGCCTGATAGCCAAGCCTTAATTATTGCCCAAC TCACCGAGCCAGAAACTGGGCGTTTTGGTCGTTTGGTGCGTTATGATCTGGCGACTGAGCAATTAAATGTTGTGCTCGAA AGCGTTGATGCCGATGTGTATTATCCACGACTGGCTCCTGATGGTCAGCAATTAGCCTATATTCGCCGCCCGCTGGGTGC TGAACTCGGCGAAGTTTGGCTATTAAAGCTTAATAATTCCATCCAACCGATTCAACTTACCAACGATCCTCAATACGATA ATTTTGATCCCCAGTGGTCGCCAGATAGCCAGCAATTGGTTTGGAGTAGACTTGACCCACAGCAATCGCGCTATTCAATC TGGCAACAAAATCCTGAAACGGGCAATACCAGCCAATTTGCTGATGATGCGATTTGGCCGCGCTGGTTGCCCTAA
Upstream 100 bases:
>100_bases CTTTAAATAAAGATTGATTGTTGTGCGATAATCCGTCAGGCCTGCTGCTGTGAAGTGGCTAGCCTGACGGATTCTGGCTA TTTAAGAGGAATGTTGCCCC
Downstream 100 bases:
>100_bases AACACAATGCAGCAGGTTTGGCCTGCTGCATTGGTGATCGTGTGTTGTCGTGTAATTATTGTTTGACGATACGGTTTTCG ATGTTGGCGCTGATTGGCTG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 344; Mature: 344
Protein sequence:
>344_residues MRWIIFLGIIASLIGCGSVQSTAVPTSVPTFGSQGWRLSYVQQPLTSAHLIISGVAGFRTIGAAVNGPACFSQGRLVYTT ATSTTKRLVASNLANLQTQILVDDPEAVLSQATCHPTNDQLLYLRSPLALIDDEPAPPSIWQISANLSQPQSLDVDQTPA LNQQWSPDGNWLIYELADRPQLVLQDVTGVTRELTLTGTFTWQPDSQALIIAQLTEPETGRFGRLVRYDLATEQLNVVLE SVDADVYYPRLAPDGQQLAYIRRPLGAELGEVWLLKLNNSIQPIQLTNDPQYDNFDPQWSPDSQQLVWSRLDPQQSRYSI WQQNPETGNTSQFADDAIWPRWLP
Sequences:
>Translated_344_residues MRWIIFLGIIASLIGCGSVQSTAVPTSVPTFGSQGWRLSYVQQPLTSAHLIISGVAGFRTIGAAVNGPACFSQGRLVYTT ATSTTKRLVASNLANLQTQILVDDPEAVLSQATCHPTNDQLLYLRSPLALIDDEPAPPSIWQISANLSQPQSLDVDQTPA LNQQWSPDGNWLIYELADRPQLVLQDVTGVTRELTLTGTFTWQPDSQALIIAQLTEPETGRFGRLVRYDLATEQLNVVLE SVDADVYYPRLAPDGQQLAYIRRPLGAELGEVWLLKLNNSIQPIQLTNDPQYDNFDPQWSPDSQQLVWSRLDPQQSRYSI WQQNPETGNTSQFADDAIWPRWLP >Mature_344_residues MRWIIFLGIIASLIGCGSVQSTAVPTSVPTFGSQGWRLSYVQQPLTSAHLIISGVAGFRTIGAAVNGPACFSQGRLVYTT ATSTTKRLVASNLANLQTQILVDDPEAVLSQATCHPTNDQLLYLRSPLALIDDEPAPPSIWQISANLSQPQSLDVDQTPA LNQQWSPDGNWLIYELADRPQLVLQDVTGVTRELTLTGTFTWQPDSQALIIAQLTEPETGRFGRLVRYDLATEQLNVVLE SVDADVYYPRLAPDGQQLAYIRRPLGAELGEVWLLKLNNSIQPIQLTNDPQYDNFDPQWSPDSQQLVWSRLDPQQSRYSI WQQNPETGNTSQFADDAIWPRWLP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 38226; Mature: 38226
Theoretical pI: Translated: 4.22; Mature: 4.22
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 0.3 %Met (Translated Protein) 1.2 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 0.3 %Met (Mature Protein) 1.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRWIIFLGIIASLIGCGSVQSTAVPTSVPTFGSQGWRLSYVQQPLTSAHLIISGVAGFRT CEEEEEHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCEEHHHHCCHHHHHHEEHHHHHHHH IGAAVNGPACFSQGRLVYTTATSTTKRLVASNLANLQTQILVDDPEAVLSQATCHPTNDQ HCCCCCCCHHHCCCEEEEEECCCHHHHHHHHHHHCCEEEEEEECHHHHHHCCCCCCCCCC LLYLRSPLALIDDEPAPPSIWQISANLSQPQSLDVDQTPALNQQWSPDGNWLIYELADRP EEEEECCCCEECCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCC QLVLQDVTGVTRELTLTGTFTWQPDSQALIIAQLTEPETGRFGRLVRYDLATEQLNVVLE HHHHHHHCCCEEEEEEEEEEEECCCCCEEEEEEECCCCCCCCCCEEEEHHHHHHHHHHHH SVDADVYYPRLAPDGQQLAYIRRPLGAELGEVWLLKLNNSIQPIQLTNDPQYDNFDPQWS HCCCCEEECCCCCCCHHHHHHHCCCCCCCCEEEEEEECCCCCEEEECCCCCCCCCCCCCC PDSQQLVWSRLDPQQSRYSIWQQNPETGNTSQFADDAIWPRWLP CCHHHHHHHHCCCCHHHHHHHHCCCCCCCCCHHHHCCCCCCCCC >Mature Secondary Structure MRWIIFLGIIASLIGCGSVQSTAVPTSVPTFGSQGWRLSYVQQPLTSAHLIISGVAGFRT CEEEEEHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCEEHHHHCCHHHHHHEEHHHHHHHH IGAAVNGPACFSQGRLVYTTATSTTKRLVASNLANLQTQILVDDPEAVLSQATCHPTNDQ HCCCCCCCHHHCCCEEEEEECCCHHHHHHHHHHHCCEEEEEEECHHHHHHCCCCCCCCCC LLYLRSPLALIDDEPAPPSIWQISANLSQPQSLDVDQTPALNQQWSPDGNWLIYELADRP EEEEECCCCEECCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCC QLVLQDVTGVTRELTLTGTFTWQPDSQALIIAQLTEPETGRFGRLVRYDLATEQLNVVLE HHHHHHHCCCEEEEEEEEEEEECCCCCEEEEEEECCCCCCCCCCEEEEHHHHHHHHHHHH SVDADVYYPRLAPDGQQLAYIRRPLGAELGEVWLLKLNNSIQPIQLTNDPQYDNFDPQWS HCCCCEEECCCCCCCHHHHHHHCCCCCCCCEEEEEEECCCCCEEEECCCCCCCCCCCCCC PDSQQLVWSRLDPQQSRYSIWQQNPETGNTSQFADDAIWPRWLP CCHHHHHHHHCCCCHHHHHHHHCCCCCCCCCHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA