| Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
|---|---|
| Accession | NC_009972 |
| Length | 6,346,587 |
Click here to switch to the map view.
The map label for this gene is quiP [H]
Identifier: 159898624
GI number: 159898624
Start: 2628280
End: 2630712
Strand: Reverse
Name: quiP [H]
Synonym: Haur_2103
Alternate gene names: 159898624
Gene position: 2630712-2628280 (Counterclockwise)
Preceding gene: 159898625
Following gene: 159898623
Centisome position: 41.45
GC content: 50.55
Gene sequence:
>2433_bases ATGCGTCGAATTTGGAAATTTACGCGCTGGATTTTGTTGGGCTTGCTCGTGCTTGGCTTGATCACAGGTACTGGCGGCTA TGTGTATTTACGCCAGTCGTTGCCCCAAACCAGCGGCACAATTGAGCTGACTGGGATTCAACAACCTGTCACAATTGTGC GCGATCAAGCTGGAGTGCCGCATATACAGGCTGCCAATTATCATGATGGCTTGTTTGGATTAGGCTTTGTGCATGCCCAA GATCGGCTGTGGCAGCTGGAGTTTCAGCGCCGCTTGGCACGGGGCGAGCTTTCGGAGGTGCTTGGCCCAGCAACGATCGA AACTGATCGATTTTTGCGAGCTTTAGGCTTGGTTGATGCTGCTGTAAACGCTTGGAACGCGCTTGATCCAGCTAGTCAAC AGGCAATTCAAGCTTATATTGCGGGAATCAATCAATTTATTATTCATCACGATGGCATGGATTTGCCGCCAGAATTTACT ATTCTGGGGTTTAGCCCACGTTTGTGGCAGCCAATCGATGTGCTGTTGACTGGGAAGTTACAGGCTTGGAGCCTTGGGGC CAATTGGAGTGCTGAGGTTTTGTATAGCCAGCTCATTGCTCAGGTTGGGCCAGAACGCGCAGCTTTTTTGTTGCCAGCGG CTAGCCCCGACGATCCATTGATTTTGCCCGATGCAACCTATAGCGCTGGTTCGGCTCCTGCTCCGACGATGGCCAGCTCT AACTTCTGTGGAGCTAATGCCGACAGTTGTACAAGCCTGTTGACCCGAGTTGAGCAGTTGCATCAGCAATTTAAGCTTGC TGGGAGTTATGTAGGCAGCAATAGTTGGGTTTTGGCAGGCCAACATACTAGCAGTGGTAAGCCATTGCTGGCAAATGACC CTCATCTTGCGGCCCAAGCACCCTCAATTTGGTATCTAGCCCAGATTCAAGCCGGTGAACTTGACGTAATTGGTGCAACC TTACCTGGTGTTCCGGCAGTGATGATTGGGCATAATCGTTCGATTGCCTGGGGGCTGACGAATACCGGGGTTGACGTGCA AGATTTGGTGATCGAACGGCTTGATCAAGCAGGCAACGCTGAATATCTGGGCAAACCTTATCCGTTGACTCGACGCGATG AAATAATTAAAGTTAAAGATCAACCAGATCACATGCTGCAAGTACGCAGTAGTCGGAATGGGCCGATTATCTCCGATGTT GATGCTGAACTACAAGCCACCAACCAAGTGCTTGCGTTGCGTTGGACTGCGCTCGAACCGACTGATACAACCATCACTGC TTTGTTGCAATTGAATCTTGCCAGCGATTGGCAGACATTTCGCGCAGCTTTGGCCTGGTACCAAGCCCCTATGCAAAACT TTAGCTATGCCGATGTCAATAACAATATTGGCTTGCAAATCGCTGGCCGCTTGCCAATTCGCGCTAACGGTGATGGCCGC TTGCCCGTTGAAGGTTGGAATCAGCAGGCAGCGTGGTTACGCTTGAGTGAGTTTGATGAATTGCCATTTAGCTATAATCC GCCAAGTGGCATGCTGGTTTCGGCCAATAATCAGGCAGTTGCCGATGATTATCCCTTGTTGATTAGCCGCAGTTGGGCTC CAGCCTATCGTGCTCAGCGAATTTGGCAATTGCTCAGTGAAAAGCCAACCTTTGATCAAGCTGATATGCAACGAATGCAG GCTGATCAACGCTCATTGCAAGCTCAACAGCTTTTACCGTTATTGCTCACGGCCCAAACCACTAATCCCCAAGCCTTGCA AGCCTTGGAATTGCTCAAAAACTGGGATGCAAGCTTGACAAGTGATAGTGCGGCGGCGGCAATCTACGAAACATGGTACT TGCGCTTGGCACGGGCAATTGTAGTTGATGATATAGGTGAGCAACTCTGGCGCTCGTATAGCTATCATGAACAATTTTTT GCGCTGGCGATTCCCACCATCTTGCAAACCAACGATCAGGCGTGGTGTGATGATCAAACAACTGCCGAGCCTGAATCGTG CGCATTATTGATCGGTCGGGTGTTGGAGCAAACGCTGGCCGAATTAAGCGCTGAGCATGGCGGCGAGATTGAGCAATGGC GTTGGGATTCAATCCACCAAGCAGTCTTCCCACATGCCGTATTCGCTGGCATCGAACCGCTTGATAGCTGGTTTGGTCAT ACAATTGGCAATGGCGGTGATAGCGCGACGATCAATGCTGGTCCAACCGATCGGATTGATTTTGTGCAATATGGTGGGCC GATCTATCGCCAAATTGTGGATCTTGGTGCGCTTGATAACGCCGTCTATATCCAAACCCCTGGGCAATCGGCGCATATCC TGAGCACCCATTTTGACGATTTACTTGAACCATGGCAACGTGGCGAATATCTGCCAATGCGCTTGCCACAGCCCGCTGAA ACCCAAACGACGCTGAGGCTTCAGCCAGAATAG
Upstream 100 bases:
>100_bases ATCCATTGTTTCGATAATGCAGGGCTGAGCAAGAAACTGGTTAGCTCTGCGTGACGTTTTGCTAGCAACTTACCCATCCT AATTAAAACAGGGATCGATC
Downstream 100 bases:
>100_bases GAACCAGCATGACAACTACCGATTGGGGCGCAATCGATCAAACCAGTGCTGCCCCCACCCATTGTATTGGCTATCTCAAC ACGGTCAGCGAGCTTGACCA
Product: peptidase S45 penicillin amidase
Products: NA
Alternate protein names: AHL acylase quiP; Acyl-HSL acylase quiP; Acyl-HSL acylase quiP subunit alpha; Acyl-HSL acylase quiP subunit beta [H]
Number of amino acids: Translated: 810; Mature: 810
Protein sequence:
>810_residues MRRIWKFTRWILLGLLVLGLITGTGGYVYLRQSLPQTSGTIELTGIQQPVTIVRDQAGVPHIQAANYHDGLFGLGFVHAQ DRLWQLEFQRRLARGELSEVLGPATIETDRFLRALGLVDAAVNAWNALDPASQQAIQAYIAGINQFIIHHDGMDLPPEFT ILGFSPRLWQPIDVLLTGKLQAWSLGANWSAEVLYSQLIAQVGPERAAFLLPAASPDDPLILPDATYSAGSAPAPTMASS NFCGANADSCTSLLTRVEQLHQQFKLAGSYVGSNSWVLAGQHTSSGKPLLANDPHLAAQAPSIWYLAQIQAGELDVIGAT LPGVPAVMIGHNRSIAWGLTNTGVDVQDLVIERLDQAGNAEYLGKPYPLTRRDEIIKVKDQPDHMLQVRSSRNGPIISDV DAELQATNQVLALRWTALEPTDTTITALLQLNLASDWQTFRAALAWYQAPMQNFSYADVNNNIGLQIAGRLPIRANGDGR LPVEGWNQQAAWLRLSEFDELPFSYNPPSGMLVSANNQAVADDYPLLISRSWAPAYRAQRIWQLLSEKPTFDQADMQRMQ ADQRSLQAQQLLPLLLTAQTTNPQALQALELLKNWDASLTSDSAAAAIYETWYLRLARAIVVDDIGEQLWRSYSYHEQFF ALAIPTILQTNDQAWCDDQTTAEPESCALLIGRVLEQTLAELSAEHGGEIEQWRWDSIHQAVFPHAVFAGIEPLDSWFGH TIGNGGDSATINAGPTDRIDFVQYGGPIYRQIVDLGALDNAVYIQTPGQSAHILSTHFDDLLEPWQRGEYLPMRLPQPAE TQTTLRLQPE
Sequences:
>Translated_810_residues MRRIWKFTRWILLGLLVLGLITGTGGYVYLRQSLPQTSGTIELTGIQQPVTIVRDQAGVPHIQAANYHDGLFGLGFVHAQ DRLWQLEFQRRLARGELSEVLGPATIETDRFLRALGLVDAAVNAWNALDPASQQAIQAYIAGINQFIIHHDGMDLPPEFT ILGFSPRLWQPIDVLLTGKLQAWSLGANWSAEVLYSQLIAQVGPERAAFLLPAASPDDPLILPDATYSAGSAPAPTMASS NFCGANADSCTSLLTRVEQLHQQFKLAGSYVGSNSWVLAGQHTSSGKPLLANDPHLAAQAPSIWYLAQIQAGELDVIGAT LPGVPAVMIGHNRSIAWGLTNTGVDVQDLVIERLDQAGNAEYLGKPYPLTRRDEIIKVKDQPDHMLQVRSSRNGPIISDV DAELQATNQVLALRWTALEPTDTTITALLQLNLASDWQTFRAALAWYQAPMQNFSYADVNNNIGLQIAGRLPIRANGDGR LPVEGWNQQAAWLRLSEFDELPFSYNPPSGMLVSANNQAVADDYPLLISRSWAPAYRAQRIWQLLSEKPTFDQADMQRMQ ADQRSLQAQQLLPLLLTAQTTNPQALQALELLKNWDASLTSDSAAAAIYETWYLRLARAIVVDDIGEQLWRSYSYHEQFF ALAIPTILQTNDQAWCDDQTTAEPESCALLIGRVLEQTLAELSAEHGGEIEQWRWDSIHQAVFPHAVFAGIEPLDSWFGH TIGNGGDSATINAGPTDRIDFVQYGGPIYRQIVDLGALDNAVYIQTPGQSAHILSTHFDDLLEPWQRGEYLPMRLPQPAE TQTTLRLQPE >Mature_810_residues MRRIWKFTRWILLGLLVLGLITGTGGYVYLRQSLPQTSGTIELTGIQQPVTIVRDQAGVPHIQAANYHDGLFGLGFVHAQ DRLWQLEFQRRLARGELSEVLGPATIETDRFLRALGLVDAAVNAWNALDPASQQAIQAYIAGINQFIIHHDGMDLPPEFT ILGFSPRLWQPIDVLLTGKLQAWSLGANWSAEVLYSQLIAQVGPERAAFLLPAASPDDPLILPDATYSAGSAPAPTMASS NFCGANADSCTSLLTRVEQLHQQFKLAGSYVGSNSWVLAGQHTSSGKPLLANDPHLAAQAPSIWYLAQIQAGELDVIGAT LPGVPAVMIGHNRSIAWGLTNTGVDVQDLVIERLDQAGNAEYLGKPYPLTRRDEIIKVKDQPDHMLQVRSSRNGPIISDV DAELQATNQVLALRWTALEPTDTTITALLQLNLASDWQTFRAALAWYQAPMQNFSYADVNNNIGLQIAGRLPIRANGDGR LPVEGWNQQAAWLRLSEFDELPFSYNPPSGMLVSANNQAVADDYPLLISRSWAPAYRAQRIWQLLSEKPTFDQADMQRMQ ADQRSLQAQQLLPLLLTAQTTNPQALQALELLKNWDASLTSDSAAAAIYETWYLRLARAIVVDDIGEQLWRSYSYHEQFF ALAIPTILQTNDQAWCDDQTTAEPESCALLIGRVLEQTLAELSAEHGGEIEQWRWDSIHQAVFPHAVFAGIEPLDSWFGH TIGNGGDSATINAGPTDRIDFVQYGGPIYRQIVDLGALDNAVYIQTPGQSAHILSTHFDDLLEPWQRGEYLPMRLPQPAE TQTTLRLQPE
Specific function: Catalyzes the deacylation of acyl-homoserine lactone (AHL or acyl-HSL), releasing homoserine lactone (HSL) and the corresponding fatty acid. Possesses a specificity for the degradation of long-chain acyl-HSLs (side chains of seven or more carbons in lengt
COG id: COG2366
COG function: function code R; Protein related to penicillin acylase
Gene ontology:
Cell location: Periplasm (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the peptidase S45 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR014395 - InterPro: IPR002692 [H]
Pfam domain/function: PF01804 Penicil_amidase [H]
EC number: =3.5.1.97 [H]
Molecular weight: Translated: 89413; Mature: 89413
Theoretical pI: Translated: 4.58; Mature: 4.58
Prosite motif: PS01191 RIBOSOMAL_S3AE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 1.7 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRRIWKFTRWILLGLLVLGLITGTGGYVYLRQSLPQTSGTIELTGIQQPVTIVRDQAGVP CCHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCEEEEEECCCCHHHHHCCCCCC HIQAANYHDGLFGLGFVHAQDRLWQLEFQRRLARGELSEVLGPATIETDRFLRALGLVDA CEEECCCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHH AVNAWNALDPASQQAIQAYIAGINQFIIHHDGMDLPPEFTILGFSPRLWQPIDVLLTGKL HHHHHCCCCHHHHHHHHHHHHHHHHEEEECCCCCCCCCEEEEECCCCCCCCEEEEEECCE QAWSLGANWSAEVLYSQLIAQVGPERAAFLLPAASPDDPLILPDATYSAGSAPAPTMASS EEEECCCCCHHHHHHHHHHHHCCCCCEEEEEECCCCCCCEEECCCCCCCCCCCCCCCCCC NFCGANADSCTSLLTRVEQLHQQFKLAGSYVGSNSWVLAGQHTSSGKPLLANDPHLAAQA CCCCCCHHHHHHHHHHHHHHHHHHHHHHHEECCCCEEEEECCCCCCCCEECCCCCCCCCC PSIWYLAQIQAGELDVIGATLPGVPAVMIGHNRSIAWGLTNTGVDVQDLVIERLDQAGNA CCEEEEEEECCCCEEEEECCCCCCCEEEEECCCEEEEECCCCCCCHHHHHHHHHHCCCCC EYLGKPYPLTRRDEIIKVKDQPDHMLQVRSSRNGPIISDVDAELQATNQVLALRWTALEP CCCCCCCCCCCCCCEEEECCCCCHHHHHHCCCCCCEEECCCHHHHHCCCEEEEEEEECCC TDTTITALLQLNLASDWQTFRAALAWYQAPMQNFSYADVNNNIGLQIAGRLPIRANGDGR CCHHEEEHEEECCHHHHHHHHHHHHHHHHHHHCCCEEECCCCCCEEEEECCCEEECCCCC LPVEGWNQQAAWLRLSEFDELPFSYNPPSGMLVSANNQAVADDYPLLISRSWAPAYRAQR CCCCCCCCCHHEEEHHHHCCCCCCCCCCCCEEEECCCCEECCCCCEEEECCCCHHHHHHH IWQLLSEKPTFDQADMQRMQADQRSLQAQQLLPLLLTAQTTNPQALQALELLKNWDASLT HHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHEEECCCCHHHHHHHHHHHHCCCCCC SDSAAAAIYETWYLRLARAIVVDDIGEQLWRSYSYHEQFFALAIPTILQTNDQAWCDDQT CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC TAEPESCALLIGRVLEQTLAELSAEHGGEIEQWRWDSIHQAVFPHAVFAGIEPLDSWFGH CCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHCC TIGNGGDSATINAGPTDRIDFVQYGGPIYRQIVDLGALDNAVYIQTPGQSAHILSTHFDD CCCCCCCCCEECCCCCCCCCHHHCCCHHHHHHHHHCCCCCEEEEECCCCCCEEHHHHHHH LLEPWQRGEYLPMRLPQPAETQTTLRLQPE HHHHHHCCCCCCCCCCCCCCCCEEEEECCC >Mature Secondary Structure MRRIWKFTRWILLGLLVLGLITGTGGYVYLRQSLPQTSGTIELTGIQQPVTIVRDQAGVP CCHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCEEEEEECCCCHHHHHCCCCCC HIQAANYHDGLFGLGFVHAQDRLWQLEFQRRLARGELSEVLGPATIETDRFLRALGLVDA CEEECCCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHH AVNAWNALDPASQQAIQAYIAGINQFIIHHDGMDLPPEFTILGFSPRLWQPIDVLLTGKL HHHHHCCCCHHHHHHHHHHHHHHHHEEEECCCCCCCCCEEEEECCCCCCCCEEEEEECCE QAWSLGANWSAEVLYSQLIAQVGPERAAFLLPAASPDDPLILPDATYSAGSAPAPTMASS EEEECCCCCHHHHHHHHHHHHCCCCCEEEEEECCCCCCCEEECCCCCCCCCCCCCCCCCC NFCGANADSCTSLLTRVEQLHQQFKLAGSYVGSNSWVLAGQHTSSGKPLLANDPHLAAQA CCCCCCHHHHHHHHHHHHHHHHHHHHHHHEECCCCEEEEECCCCCCCCEECCCCCCCCCC PSIWYLAQIQAGELDVIGATLPGVPAVMIGHNRSIAWGLTNTGVDVQDLVIERLDQAGNA CCEEEEEEECCCCEEEEECCCCCCCEEEEECCCEEEEECCCCCCCHHHHHHHHHHCCCCC EYLGKPYPLTRRDEIIKVKDQPDHMLQVRSSRNGPIISDVDAELQATNQVLALRWTALEP CCCCCCCCCCCCCCEEEECCCCCHHHHHHCCCCCCEEECCCHHHHHCCCEEEEEEEECCC TDTTITALLQLNLASDWQTFRAALAWYQAPMQNFSYADVNNNIGLQIAGRLPIRANGDGR CCHHEEEHEEECCHHHHHHHHHHHHHHHHHHHCCCEEECCCCCCEEEEECCCEEECCCCC LPVEGWNQQAAWLRLSEFDELPFSYNPPSGMLVSANNQAVADDYPLLISRSWAPAYRAQR CCCCCCCCCHHEEEHHHHCCCCCCCCCCCCEEEECCCCEECCCCCEEEECCCCHHHHHHH IWQLLSEKPTFDQADMQRMQADQRSLQAQQLLPLLLTAQTTNPQALQALELLKNWDASLT HHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHEEECCCCHHHHHHHHHHHHCCCCCC SDSAAAAIYETWYLRLARAIVVDDIGEQLWRSYSYHEQFFALAIPTILQTNDQAWCDDQT CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC TAEPESCALLIGRVLEQTLAELSAEHGGEIEQWRWDSIHQAVFPHAVFAGIEPLDSWFGH CCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHCC TIGNGGDSATINAGPTDRIDFVQYGGPIYRQIVDLGALDNAVYIQTPGQSAHILSTHFDD CCCCCCCCCEECCCCCCCCCHHHCCCHHHHHHHHHCCCCCEEEEECCCCCCEEHHHHHHH LLEPWQRGEYLPMRLPQPAETQTTLRLQPE HHHHHHCCCCCCCCCCCCCCCCEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA