Definition Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome.
Accession NC_009972
Length 6,346,587

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The map label for this gene is 159898622

Identifier: 159898622

GI number: 159898622

Start: 2625759

End: 2626790

Strand: Reverse

Name: 159898622

Synonym: Haur_2101

Alternate gene names: NA

Gene position: 2626790-2625759 (Counterclockwise)

Preceding gene: 159898623

Following gene: 159898621

Centisome position: 41.39

GC content: 51.36

Gene sequence:

>1032_bases
ATGTTAAAACATTGTTTCGCACCCATGATTGGTGTCTTGCTGATCATCACTGCTTGTGGGACAACCCTTACCACCCAGAC
CCCTGATGCGGTTCAACCAACGAATCCATCAACGAGTACCGCAACGATCAGTACCACCACTGCTCCAGCATCGGCAGGGT
ACCCTGTCACGATTGAAAACTGTGGGCGGAAACTTACCTTTGCGAAAGCGCCAGAGCGGATAATTAGTCTCTGGCAACCA
CCAACGGAAATGCTGCTTGCCTTAGGTTTAGGTGACCGCATTGTTGCGGTTGGTGGCAATTACGATGACTATCCCGCAAA
TCTTCAGGCCGAAGCCGCGACCCTCAAACAAATCGGGACGGCGATGCAATGGCCGGTCAAAGAAGTGACGCTTGCCGAAA
ATCCTGATTTCGTTATCTCGGAACAACTCGAAGGCTTTGCATTCGATAGCAATTCAGGGTATGCCACGGTCGCTGAATTG
GAAGCCGCTGGGGCACAGGTCTATTCCAACAATGCCTGTACGATGGCTGATGCAGGAAGCAAACGTCTTGAGCAAGTCTA
TACTGATCTTGCGAACTTGGGGGCGATTTTTGGGGTGTCGGAACGAGCTAATGCGATTATCACCGACCTTCAGTCCCGTC
AAGCCGCGATTGAACAACGGATGGTTGGGGTTTCACCTGTGAACGTTCTGTTCTACACCGGGGGAGAAGGCCCGCTCAAC
GTGCTCTCGGGTGGAGTCTGGGGCGATTTGATTGTGCGAGCTGGCGGAAAAAATGTCTTTGATCAGGATGTTTTTCAAGT
GAGTGCCGAAGAATTTGCGGCGGCGCAACCCGATGTCATTTTGCTGGGGACATTTCCTGGTCAGGATGCCGCAATGCTGG
AGTCGTATCTCAAAACAACCTTTCCGACCATCCCAGCAGTCCAAAATAATCGGTTGATACCTATTCCCACGATTAATACC
GAAGCCAGTATTCGCATTATTGATGGCCTTGAGCAAATTGCTCGGGCGCTGCACCCAGAGGTATTCGAGTGA

Upstream 100 bases:

>100_bases
GGATAGATACACTGGTTCTTAATTGATACGCTTGTCGCATTTCTTGGTCGGATGGCAGCATCCCGACCGCTGTATGATCT
TTTTCTGAAAGAGTGTCTCC

Downstream 100 bases:

>100_bases
TCGTGCGTCATTCCCATGACCCACAATCGTCACCGCGCGTACCACCAGCAATTCCCGCCATTGGGGGGTTGCTGGTGGTA
CTCACGCTCATGTTGATTGG

Product: periplasmic binding protein

Products: NA

Alternate protein names: Vitamin; ABC Transporter; Iron Transport Lipoprotein; Iron ABC Transporter; Transporter Subunit; Fe3+-Hydroxamate ABC Transporter Periplasmic Protein; ABC-Type Transport System Periplasmic Component; MoxR-Like ATPases-Like; Iron ABC Transporter Periplasmic Protein; Iron Compound ABC Transporter; Ferric Ion ABC Transporter; Ferric Ion ABC Transpoter

Number of amino acids: Translated: 343; Mature: 343

Protein sequence:

>343_residues
MLKHCFAPMIGVLLIITACGTTLTTQTPDAVQPTNPSTSTATISTTTAPASAGYPVTIENCGRKLTFAKAPERIISLWQP
PTEMLLALGLGDRIVAVGGNYDDYPANLQAEAATLKQIGTAMQWPVKEVTLAENPDFVISEQLEGFAFDSNSGYATVAEL
EAAGAQVYSNNACTMADAGSKRLEQVYTDLANLGAIFGVSERANAIITDLQSRQAAIEQRMVGVSPVNVLFYTGGEGPLN
VLSGGVWGDLIVRAGGKNVFDQDVFQVSAEEFAAAQPDVILLGTFPGQDAAMLESYLKTTFPTIPAVQNNRLIPIPTINT
EASIRIIDGLEQIARALHPEVFE

Sequences:

>Translated_343_residues
MLKHCFAPMIGVLLIITACGTTLTTQTPDAVQPTNPSTSTATISTTTAPASAGYPVTIENCGRKLTFAKAPERIISLWQP
PTEMLLALGLGDRIVAVGGNYDDYPANLQAEAATLKQIGTAMQWPVKEVTLAENPDFVISEQLEGFAFDSNSGYATVAEL
EAAGAQVYSNNACTMADAGSKRLEQVYTDLANLGAIFGVSERANAIITDLQSRQAAIEQRMVGVSPVNVLFYTGGEGPLN
VLSGGVWGDLIVRAGGKNVFDQDVFQVSAEEFAAAQPDVILLGTFPGQDAAMLESYLKTTFPTIPAVQNNRLIPIPTINT
EASIRIIDGLEQIARALHPEVFE
>Mature_343_residues
MLKHCFAPMIGVLLIITACGTTLTTQTPDAVQPTNPSTSTATISTTTAPASAGYPVTIENCGRKLTFAKAPERIISLWQP
PTEMLLALGLGDRIVAVGGNYDDYPANLQAEAATLKQIGTAMQWPVKEVTLAENPDFVISEQLEGFAFDSNSGYATVAEL
EAAGAQVYSNNACTMADAGSKRLEQVYTDLANLGAIFGVSERANAIITDLQSRQAAIEQRMVGVSPVNVLFYTGGEGPLN
VLSGGVWGDLIVRAGGKNVFDQDVFQVSAEEFAAAQPDVILLGTFPGQDAAMLESYLKTTFPTIPAVQNNRLIPIPTINT
EASIRIIDGLEQIARALHPEVFE

Specific function: Unknown

COG id: COG0614

COG function: function code P; ABC-type Fe3+-hydroxamate transport system, periplasmic component

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 36453; Mature: 36453

Theoretical pI: Translated: 4.17; Mature: 4.17

Prosite motif: PS00013 PROKAR_LIPOPROTEIN ; PS50983 FE_B12_PBP

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLKHCFAPMIGVLLIITACGTTLTTQTPDAVQPTNPSTSTATISTTTAPASAGYPVTIEN
CCHHHHHHHHHHHHHHHHCCCEEECCCCCCCCCCCCCCCEEEEEECCCCCCCCCCEEHHH
CGRKLTFAKAPERIISLWQPPTEMLLALGLGDRIVAVGGNYDDYPANLQAEAATLKQIGT
CCCEEEEHHCCHHHHHHCCCHHHHHHHHCCCCEEEEECCCCCCCCCCCHHHHHHHHHHHH
AMQWPVKEVTLAENPDFVISEQLEGFAFDSNSGYATVAELEAAGAQVYSNNACTMADAGS
HHCCCCCEEEECCCCCEEEECCCCCEEEECCCCEEEEEEHHHCCCEEECCCCEEECCCCH
KRLEQVYTDLANLGAIFGVSERANAIITDLQSRQAAIEQRMVGVSPVNVLFYTGGEGPLN
HHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCHH
VLSGGVWGDLIVRAGGKNVFDQDVFQVSAEEFAAAQPDVILLGTFPGQDAAMLESYLKTT
HHCCCCCEEEEEECCCCCCCHHHHHHHCHHHHHCCCCCEEEEECCCCCHHHHHHHHHHHH
FPTIPAVQNNRLIPIPTINTEASIRIIDGLEQIARALHPEVFE
CCCCCCCCCCEEEECCCCCCCCCEEEHHHHHHHHHHHCCCCCC
>Mature Secondary Structure
MLKHCFAPMIGVLLIITACGTTLTTQTPDAVQPTNPSTSTATISTTTAPASAGYPVTIEN
CCHHHHHHHHHHHHHHHHCCCEEECCCCCCCCCCCCCCCEEEEEECCCCCCCCCCEEHHH
CGRKLTFAKAPERIISLWQPPTEMLLALGLGDRIVAVGGNYDDYPANLQAEAATLKQIGT
CCCEEEEHHCCHHHHHHCCCHHHHHHHHCCCCEEEEECCCCCCCCCCCHHHHHHHHHHHH
AMQWPVKEVTLAENPDFVISEQLEGFAFDSNSGYATVAELEAAGAQVYSNNACTMADAGS
HHCCCCCEEEECCCCCEEEECCCCCEEEECCCCEEEEEEHHHCCCEEECCCCEEECCCCH
KRLEQVYTDLANLGAIFGVSERANAIITDLQSRQAAIEQRMVGVSPVNVLFYTGGEGPLN
HHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCHH
VLSGGVWGDLIVRAGGKNVFDQDVFQVSAEEFAAAQPDVILLGTFPGQDAAMLESYLKTT
HHCCCCCEEEEEECCCCCCCHHHHHHHCHHHHHCCCCCEEEEECCCCCHHHHHHHHHHHH
FPTIPAVQNNRLIPIPTINTEASIRIIDGLEQIARALHPEVFE
CCCCCCCCCCEEEECCCCCCCCCEEEHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA