Click here to switch to the map view.

The map label for this gene is 159898574

Identifier: 159898574

GI number: 159898574

Start: 2561944

End: 2562198

Strand: Reverse

Name: 159898574

Synonym: Haur_2052

Alternate gene names: NA

Gene position: 2562198-2561944 (Counterclockwise)

Preceding gene: 159898575

Following gene: 159898572

Centisome position: 40.37

GC content: 52.55

Gene sequence:

>255_bases
ATGGCTAAACTCATGATTCACAACCGGATTCGCCACCTGCGCGTTGAGGCCCATGGGATGACGCAACAAGCGCTCGCCGA
TCATGTCGGGATTACCCGCCAAACCGTGATTGCCCTCGAACAGGGCCGATATTACCCATCCCTTGAATTGGCATTTCGGA
TTGCGCTGCTTTTTGGTACGCCGCTCGAGCAGGTGTTTCAGGTTGATAGGACGATTGAAATCCACGATGCTTTTATCCAA
CCACAAGCACAGTAG

Upstream 100 bases:

>100_bases
ACGCAAGTATTAACCGCAATTCACTGGCTGTTTGCGAGTTTTGTGCTTGCCAACTGCGTGTATTACGCCAGCATTGTGGT
TAGCTATCGGAAACTCACGC

Downstream 100 bases:

>100_bases
CGTTTTTTGCACGATACACACGTCCGATTGATTACTCGACTAATCAATCGGACGTGTTTTTATTTAATCCACCATCGTAT
AAGATACTGGAATTAAATCA

Product: XRE family transcriptional regulator

Products: NA

Alternate protein names: Transcriptional Regulator XRE Family; HTH-Type Transcriptional Regulator; Helix-Turn-Helix; Transcriptional Regulator; Transciptional Regulator

Number of amino acids: Translated: 84; Mature: 83

Protein sequence:

>84_residues
MAKLMIHNRIRHLRVEAHGMTQQALADHVGITRQTVIALEQGRYYPSLELAFRIALLFGTPLEQVFQVDRTIEIHDAFIQ
PQAQ

Sequences:

>Translated_84_residues
MAKLMIHNRIRHLRVEAHGMTQQALADHVGITRQTVIALEQGRYYPSLELAFRIALLFGTPLEQVFQVDRTIEIHDAFIQ
PQAQ
>Mature_83_residues
AKLMIHNRIRHLRVEAHGMTQQALADHVGITRQTVIALEQGRYYPSLELAFRIALLFGTPLEQVFQVDRTIEIHDAFIQP
QAQ

Specific function: Unknown

COG id: COG1476

COG function: function code K; Predicted transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 9663; Mature: 9532

Theoretical pI: Translated: 7.91; Mature: 7.91

Prosite motif: PS50943 HTH_CROC1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAKLMIHNRIRHLRVEAHGMTQQALADHVGITRQTVIALEQGRYYPSLELAFRIALLFGT
CCCHHHHHHHHHEEECCCCCCHHHHHHHCCCCHHHHEEEECCCCCCCHHHHHHHHHHHCC
PLEQVFQVDRTIEIHDAFIQPQAQ
CHHHHHHHCCEEEEEHHCCCCCCC
>Mature Secondary Structure 
AKLMIHNRIRHLRVEAHGMTQQALADHVGITRQTVIALEQGRYYPSLELAFRIALLFGT
CCHHHHHHHHHEEECCCCCCHHHHHHHCCCCHHHHEEEECCCCCCCHHHHHHHHHHHCC
PLEQVFQVDRTIEIHDAFIQPQAQ
CHHHHHHHCCEEEEEHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA