| Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
|---|---|
| Accession | NC_009972 |
| Length | 6,346,587 |
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The map label for this gene is 159898561
Identifier: 159898561
GI number: 159898561
Start: 2540728
End: 2541438
Strand: Reverse
Name: 159898561
Synonym: Haur_2037
Alternate gene names: NA
Gene position: 2541438-2540728 (Counterclockwise)
Preceding gene: 159898562
Following gene: 159898555
Centisome position: 40.04
GC content: 42.05
Gene sequence:
>711_bases ATGATAACTCCAGATGTGTTTAAAGATGCCCTTTTAACACAAGATTATGAGACGATGCGTTTCGCTATTGCTACGGGATT TGATGTCAATACCGTTTGGCAGCTAGGACGGCCTTCATTTCTTCAAATCGCGCAAACTATGAACGATATGGAAAGCTTGA GAATCCTGTATGAGGCTGGTGCAGTGCCAGATACGCCATGGTTAGAAAATCTTTTTAAGGACTTTTCTCGTGGCGTTATT CGCACCCATGATGGATCAGCTCACAACCCGTGTCTTCAACCAGGTATCCGCGATCTTACTGAAAACTTCACGGTTTTAAG TCTTGAATACGAGAGGGGGATATGTCATTTTTCGCGTGGCATGCACACGATAGAAATTACCCTAAAACCGTTTATACTTG ATGGCGAATGTGTTCAAACATCGATACAAGCTGATCGGATTGCCTTACCTCCGTCGCTTGACGATCTTTTAGGGCAACGT TTTATCTTTCCCCGCAATCCTGATGCGGGATATATCGATGCATCACTCTATCTTCGTCAAGCACATAATCCTGTTTATAT TAGCTCAATTCTCTTTAAGAACTTTGTCCATGATAAACGTCAGATAGAGGTCGTTATGCAAATGATGTTTGATTTTGAAG AGGAAATGATCGGGTTTGCGAATGAAGCATTAACGCTCGAGATAGCATTGTTTTTAGAGGGTTGGGAATAA
Upstream 100 bases:
>100_bases TTGCTCTGCAAGTCTTGATTTTGAGAATTGGATTGCATAGACATCAGTATTATATTTATTTTCCTTTCGCTGTGACGAGT ATCTCTTGGAGAACCCAATA
Downstream 100 bases:
>100_bases TCATTCGATAGGACGTGATCCTGAATGGAGAGACCAGTATAGTATCACCTCTACGGGAAAGCAACCCATCGATGACATAG CAAAAACCACGCACGTTTAC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 236; Mature: 236
Protein sequence:
>236_residues MITPDVFKDALLTQDYETMRFAIATGFDVNTVWQLGRPSFLQIAQTMNDMESLRILYEAGAVPDTPWLENLFKDFSRGVI RTHDGSAHNPCLQPGIRDLTENFTVLSLEYERGICHFSRGMHTIEITLKPFILDGECVQTSIQADRIALPPSLDDLLGQR FIFPRNPDAGYIDASLYLRQAHNPVYISSILFKNFVHDKRQIEVVMQMMFDFEEEMIGFANEALTLEIALFLEGWE
Sequences:
>Translated_236_residues MITPDVFKDALLTQDYETMRFAIATGFDVNTVWQLGRPSFLQIAQTMNDMESLRILYEAGAVPDTPWLENLFKDFSRGVI RTHDGSAHNPCLQPGIRDLTENFTVLSLEYERGICHFSRGMHTIEITLKPFILDGECVQTSIQADRIALPPSLDDLLGQR FIFPRNPDAGYIDASLYLRQAHNPVYISSILFKNFVHDKRQIEVVMQMMFDFEEEMIGFANEALTLEIALFLEGWE >Mature_236_residues MITPDVFKDALLTQDYETMRFAIATGFDVNTVWQLGRPSFLQIAQTMNDMESLRILYEAGAVPDTPWLENLFKDFSRGVI RTHDGSAHNPCLQPGIRDLTENFTVLSLEYERGICHFSRGMHTIEITLKPFILDGECVQTSIQADRIALPPSLDDLLGQR FIFPRNPDAGYIDASLYLRQAHNPVYISSILFKNFVHDKRQIEVVMQMMFDFEEEMIGFANEALTLEIALFLEGWE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 27046; Mature: 27046
Theoretical pI: Translated: 4.39; Mature: 4.39
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 3.8 %Met (Translated Protein) 5.1 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 3.8 %Met (Mature Protein) 5.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MITPDVFKDALLTQDYETMRFAIATGFDVNTVWQLGRPSFLQIAQTMNDMESLRILYEAG CCCHHHHHHHHHCCCHHHHEEEEECCCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCC AVPDTPWLENLFKDFSRGVIRTHDGSAHNPCLQPGIRDLTENFTVLSLEYERGICHFSRG CCCCCHHHHHHHHHHHCCEEEECCCCCCCCCCCCCHHHHHCCCEEEEEECCCCCHHHHCC MHTIEITLKPFILDGECVQTSIQADRIALPPSLDDLLGQRFIFPRNPDAGYIDASLYLRQ CEEEEEEEEEEEECCHHHHHHHCCCCEECCCCHHHHHCCCCCCCCCCCCCEEHHHHHHHH AHNPVYISSILFKNFVHDKRQIEVVMQMMFDFEEEMIGFANEALTLEIALFLEGWE CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEEEECCC >Mature Secondary Structure MITPDVFKDALLTQDYETMRFAIATGFDVNTVWQLGRPSFLQIAQTMNDMESLRILYEAG CCCHHHHHHHHHCCCHHHHEEEEECCCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCC AVPDTPWLENLFKDFSRGVIRTHDGSAHNPCLQPGIRDLTENFTVLSLEYERGICHFSRG CCCCCHHHHHHHHHHHCCEEEECCCCCCCCCCCCCHHHHHCCCEEEEEECCCCCHHHHCC MHTIEITLKPFILDGECVQTSIQADRIALPPSLDDLLGQRFIFPRNPDAGYIDASLYLRQ CEEEEEEEEEEEECCHHHHHHHCCCCEECCCCHHHHHCCCCCCCCCCCCCEEHHHHHHHH AHNPVYISSILFKNFVHDKRQIEVVMQMMFDFEEEMIGFANEALTLEIALFLEGWE CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA