| Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
|---|---|
| Accession | NC_009972 |
| Length | 6,346,587 |
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The map label for this gene is 159898522
Identifier: 159898522
GI number: 159898522
Start: 2466872
End: 2467435
Strand: Direct
Name: 159898522
Synonym: Haur_1998
Alternate gene names: NA
Gene position: 2466872-2467435 (Clockwise)
Preceding gene: 159898521
Following gene: 159898524
Centisome position: 38.87
GC content: 46.63
Gene sequence:
>564_bases ATGGAAGATCAATTAATCCCATTGCTGCGGCCTATGACAATTGTGCCTGTGGCGAATTTAATCGATCAACGCAATGCTGT TCCGGCAGAATCAGGGATATATGGCTGGTGGTTTAAAACGCTTCCACCGCAAGTTCCTAGTGCAGGCTGTTTACAGGTTG ATGATTGGACTTTGCTGCACATCGGAATTTCTCCCTCTGGGCATAATCCAAAAACGACCCGCCATTTGCGCCATCGTTTG AATGACCATTTGTCTGGTGGTGCTAATCGTTCGACCTTGCGGATGAGTTTAGGCTGTTTGTTGAGCGAGCAACTGAATTT ATGCCTAGCTCCCCATGGAGCGAGTAAATATTTAACGTTTGGCGCTGGTGAGCAGCGCTTATCGCATTGGCTAACGCAGC ATACTGGTATTTCTTGGATGCTGCATTCCCAGCCTTGGGAGCTTAAACCTATAATTCTTAAGCAATATTCCCTTCCACTC AATATCAACAATAATGATCATCCGTTTGTTGCGACGCTCAAGCGTTTGCGAGAGCAGGCAAAGCTTCAGGCTCGATTGGA ATGA
Upstream 100 bases:
>100_bases TTGAGCCTACGATGCAAGGCCTCTATCGCCGTACATCGGCGCTTGAGGAGTATTGATGAGGAGTGTAATAAAACACTCAG TATTTTTTATAAGAGAAACT
Downstream 100 bases:
>100_bases AATCTCCGTCATCAAGTATTCATAGTTTGTACTTGTTGACGGAGATTTTCGTATTGGTCTAGCTTAGAGGGTTCCAGCCC TGAGCTAGGTAACTGATGCT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 187; Mature: 187
Protein sequence:
>187_residues MEDQLIPLLRPMTIVPVANLIDQRNAVPAESGIYGWWFKTLPPQVPSAGCLQVDDWTLLHIGISPSGHNPKTTRHLRHRL NDHLSGGANRSTLRMSLGCLLSEQLNLCLAPHGASKYLTFGAGEQRLSHWLTQHTGISWMLHSQPWELKPIILKQYSLPL NINNNDHPFVATLKRLREQAKLQARLE
Sequences:
>Translated_187_residues MEDQLIPLLRPMTIVPVANLIDQRNAVPAESGIYGWWFKTLPPQVPSAGCLQVDDWTLLHIGISPSGHNPKTTRHLRHRL NDHLSGGANRSTLRMSLGCLLSEQLNLCLAPHGASKYLTFGAGEQRLSHWLTQHTGISWMLHSQPWELKPIILKQYSLPL NINNNDHPFVATLKRLREQAKLQARLE >Mature_187_residues MEDQLIPLLRPMTIVPVANLIDQRNAVPAESGIYGWWFKTLPPQVPSAGCLQVDDWTLLHIGISPSGHNPKTTRHLRHRL NDHLSGGANRSTLRMSLGCLLSEQLNLCLAPHGASKYLTFGAGEQRLSHWLTQHTGISWMLHSQPWELKPIILKQYSLPL NINNNDHPFVATLKRLREQAKLQARLE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21123; Mature: 21123
Theoretical pI: Translated: 9.66; Mature: 9.66
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEDQLIPLLRPMTIVPVANLIDQRNAVPAESGIYGWWFKTLPPQVPSAGCLQVDDWTLLH CCCCCCHHHCCCHHHHHHHHHHHCCCCCCCCCEEEEECCCCCCCCCCCCCEEECCEEEEE IGISPSGHNPKTTRHLRHRLNDHLSGGANRSTLRMSLGCLLSEQLNLCLAPHGASKYLTF EEECCCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCEEECCCCCCCEEEE GAGEQRLSHWLTQHTGISWMLHSQPWELKPIILKQYSLPLNINNNDHPFVATLKRLREQA CCCHHHHHHHHHHCCCCEEEECCCCCCCCCEEEEEEECEEEECCCCCHHHHHHHHHHHHH KLQARLE HHHHCCC >Mature Secondary Structure MEDQLIPLLRPMTIVPVANLIDQRNAVPAESGIYGWWFKTLPPQVPSAGCLQVDDWTLLH CCCCCCHHHCCCHHHHHHHHHHHCCCCCCCCCEEEEECCCCCCCCCCCCCEEECCEEEEE IGISPSGHNPKTTRHLRHRLNDHLSGGANRSTLRMSLGCLLSEQLNLCLAPHGASKYLTF EEECCCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCEEECCCCCCCEEEE GAGEQRLSHWLTQHTGISWMLHSQPWELKPIILKQYSLPLNINNNDHPFVATLKRLREQA CCCHHHHHHHHHHCCCCEEEECCCCCCCCCEEEEEEECEEEECCCCCHHHHHHHHHHHHH KLQARLE HHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA