| Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
|---|---|
| Accession | NC_009972 |
| Length | 6,346,587 |
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The map label for this gene is 159898517
Identifier: 159898517
GI number: 159898517
Start: 2459066
End: 2460895
Strand: Direct
Name: 159898517
Synonym: Haur_1993
Alternate gene names: NA
Gene position: 2459066-2460895 (Clockwise)
Preceding gene: 159898516
Following gene: 159898521
Centisome position: 38.75
GC content: 51.37
Gene sequence:
>1830_bases ATGAGCAACGATTTGATTTTTGCTGAGCATCATTTGCCAGCCTTACCGCTTGGGAAATATAGCCTGACGGTTACCCAAAC CCTGAGCTCAACTGGCCAATTGCCTGCTGGAGCTGAGCCAATTCGCCAAACGGACTATCGGACGACTGGCGAAATGTTGA TTAGTGGCGAGCGTTGGAGCTTGCCCGAAACGCTGATTGGCGCGGTTTTTCCGCCAGTTGGCAGTACGGGTGATCATTCG ACAACTTTGCCACACATTATGCTGACCCGCTCGACCTTGCCATGGGAACGCACGGCGCAGGCTAGTGGCCAGTTGCCTTG GTTGGCGCTTTTAGTCTTCAATGAGGACGAAAAACCGACTCCCAAGGTGTTGAAACGGGCAGATTTAGCTGATCCGACAG TGCTGTATCAGCTGCCGACCAGCGAATCGAACGAAACGGCTGCGGATTTGGTAACGGTGATTGATCTACCTTGGGCTACT TTGCAACCCTTGTTGCCAACGCTTGCTGATTTACCGTTGCTGACCCATGTGCGGCGAGTTGACGTAAATGAACAGGCGGT GGTTTGGGCCAACCGAATTCCCCAAGCCGATCGGATGAGCACTGTCCATTTGGTGTCGCTTGAGCAACGCTATGATCAAA CAGGGTTTATGGCTGCTGGGGCAAGTGCTGAAACGATGGTTCGTTTGGTGAGCTTGTATAGTTGGCAGTTTGCTTGTGTG GCTGAAGGTCAGCGGATTGAAGAATTGCTGACCCATTTGGATGTGGCAACGATTGGCTTGCCCAGCATCAACAACCCTCA TGCTGATGCATTTTTGGCTCAGGGTGCGGTGTTGTTACCGCATCATTTGCGCAATGGCGAACAAACGGTTGCCTGGTATC ATGGCCCGTTGCGTGCATCCCTGCAGGTGGCTGCTGCCAATTATCCCCATGCGGTCAGTGCCGATAGCTTGTTGCGGTTT GATCAACGGGTAGGCGTGTTTGATGTTTCATATGCGGCGGCGTGGGAGTTGGGGCGATTGCTCGGCTTACAAAACCAGCA ATTTAGCCAAGCCTTGTATGCTTGGAAAAGCCAACAAGCGAGCCAAAGTGTTTCCCGCTTACAAGCGCGTAACACCCGCT ACGATCATCTGCCTAGCTTTGGTCGTCAGGTTCGAGCGCGTTCGTTAAGCGAGCCAATTCCGCCAGCGATTATGAATTTT GTGCGGCGACTGAGTTTGCTCGAAGGTGTGCCATTTAGCTCATTGTTTCCTGATGAGCGCTTATTGCCACTCGAAAGCAT TCGCTTTTTTAGCCTCGATCGGGCTTGGCTGGCAGCATTAATTGATGGGGCTTTGAGTATTGGTCGGGCTAATATCGACC ATGGGAACGATGGCTATTTACGTTTGCAAATTGTGCAGCAGCTGAATTTACCTACCAGTATTTCTGGTTTTGCGATTCGT TCGAGTGTAATTGCTGGCTGGTCAGCGCTAGAAATTGAAGCCAAATCGAGCGCTGGCAGCCGCTTGGAGCACTTAAACGA AGACACAATTCGACTTGGTGAAAATATGCTGCTGTTGCTGTTTGCTGATGAGTTAGCGAGCCTCAGTATCCATCAACATG CGCAAACTATCCACTTTGGGCTTGATCGCGATAGCAATGGTTGGCACAAAACGTTGCGCAATGGCAGTGAGATTCGGCCA TTAGCATGGCATGATCAACAGCGCCAAATTCTGGATGTTGCCCAGCTTGCCAGCCAGATGAGCCAAACCCTCAATCAACC AGTTCATAGTGGCAGCTTTGCACTGCAGATGATTGAAGGCGTGGCGCGGGTAACGTTTGAACGTCGCTAG
Upstream 100 bases:
>100_bases AAGCATTGGGGCAAACCGCAATCTGCAGGATCAATCACGAATATCTTGATGGTTTGGCTGATGTACCGCAGCTTGGAAGC TGGACAATAGGGAGTTAGCG
Downstream 100 bases:
>100_bases CAGGTAATCATCGCTGGACTGGTCACGATCTAACAGATGATCGTGACCAGTCCATGGTCGTGGTTATGGAGTCACGACGC GCACCCCGATATGATGATCC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 609; Mature: 608
Protein sequence:
>609_residues MSNDLIFAEHHLPALPLGKYSLTVTQTLSSTGQLPAGAEPIRQTDYRTTGEMLISGERWSLPETLIGAVFPPVGSTGDHS TTLPHIMLTRSTLPWERTAQASGQLPWLALLVFNEDEKPTPKVLKRADLADPTVLYQLPTSESNETAADLVTVIDLPWAT LQPLLPTLADLPLLTHVRRVDVNEQAVVWANRIPQADRMSTVHLVSLEQRYDQTGFMAAGASAETMVRLVSLYSWQFACV AEGQRIEELLTHLDVATIGLPSINNPHADAFLAQGAVLLPHHLRNGEQTVAWYHGPLRASLQVAAANYPHAVSADSLLRF DQRVGVFDVSYAAAWELGRLLGLQNQQFSQALYAWKSQQASQSVSRLQARNTRYDHLPSFGRQVRARSLSEPIPPAIMNF VRRLSLLEGVPFSSLFPDERLLPLESIRFFSLDRAWLAALIDGALSIGRANIDHGNDGYLRLQIVQQLNLPTSISGFAIR SSVIAGWSALEIEAKSSAGSRLEHLNEDTIRLGENMLLLLFADELASLSIHQHAQTIHFGLDRDSNGWHKTLRNGSEIRP LAWHDQQRQILDVAQLASQMSQTLNQPVHSGSFALQMIEGVARVTFERR
Sequences:
>Translated_609_residues MSNDLIFAEHHLPALPLGKYSLTVTQTLSSTGQLPAGAEPIRQTDYRTTGEMLISGERWSLPETLIGAVFPPVGSTGDHS TTLPHIMLTRSTLPWERTAQASGQLPWLALLVFNEDEKPTPKVLKRADLADPTVLYQLPTSESNETAADLVTVIDLPWAT LQPLLPTLADLPLLTHVRRVDVNEQAVVWANRIPQADRMSTVHLVSLEQRYDQTGFMAAGASAETMVRLVSLYSWQFACV AEGQRIEELLTHLDVATIGLPSINNPHADAFLAQGAVLLPHHLRNGEQTVAWYHGPLRASLQVAAANYPHAVSADSLLRF DQRVGVFDVSYAAAWELGRLLGLQNQQFSQALYAWKSQQASQSVSRLQARNTRYDHLPSFGRQVRARSLSEPIPPAIMNF VRRLSLLEGVPFSSLFPDERLLPLESIRFFSLDRAWLAALIDGALSIGRANIDHGNDGYLRLQIVQQLNLPTSISGFAIR SSVIAGWSALEIEAKSSAGSRLEHLNEDTIRLGENMLLLLFADELASLSIHQHAQTIHFGLDRDSNGWHKTLRNGSEIRP LAWHDQQRQILDVAQLASQMSQTLNQPVHSGSFALQMIEGVARVTFERR >Mature_608_residues SNDLIFAEHHLPALPLGKYSLTVTQTLSSTGQLPAGAEPIRQTDYRTTGEMLISGERWSLPETLIGAVFPPVGSTGDHST TLPHIMLTRSTLPWERTAQASGQLPWLALLVFNEDEKPTPKVLKRADLADPTVLYQLPTSESNETAADLVTVIDLPWATL QPLLPTLADLPLLTHVRRVDVNEQAVVWANRIPQADRMSTVHLVSLEQRYDQTGFMAAGASAETMVRLVSLYSWQFACVA EGQRIEELLTHLDVATIGLPSINNPHADAFLAQGAVLLPHHLRNGEQTVAWYHGPLRASLQVAAANYPHAVSADSLLRFD QRVGVFDVSYAAAWELGRLLGLQNQQFSQALYAWKSQQASQSVSRLQARNTRYDHLPSFGRQVRARSLSEPIPPAIMNFV RRLSLLEGVPFSSLFPDERLLPLESIRFFSLDRAWLAALIDGALSIGRANIDHGNDGYLRLQIVQQLNLPTSISGFAIRS SVIAGWSALEIEAKSSAGSRLEHLNEDTIRLGENMLLLLFADELASLSIHQHAQTIHFGLDRDSNGWHKTLRNGSEIRPL AWHDQQRQILDVAQLASQMSQTLNQPVHSGSFALQMIEGVARVTFERR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 67464; Mature: 67333
Theoretical pI: Translated: 6.39; Mature: 6.39
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSNDLIFAEHHLPALPLGKYSLTVTQTLSSTGQLPAGAEPIRQTDYRTTGEMLISGERWS CCCCCEEECCCCCCCCCCCEEEEEEHHHHHCCCCCCCCCCHHHCCCCCCCCEEECCCCCC LPETLIGAVFPPVGSTGDHSTTLPHIMLTRSTLPWERTAQASGQLPWLALLVFNEDEKPT CHHHHHHHHCCCCCCCCCCCCCCCEEEEECCCCCCHHHHHCCCCCCEEEEEEECCCCCCC PKVLKRADLADPTVLYQLPTSESNETAADLVTVIDLPWATLQPLLPTLADLPLLTHVRRV HHHHHHCCCCCCEEEEECCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHCCHHHHHHHHC DVNEQAVVWANRIPQADRMSTVHLVSLEQRYDQTGFMAAGASAETMVRLVSLYSWQFACV CCCCCEEEEECCCCCCCCCCEEEEEEHHHHHCCCCCEECCCCHHHHHHHHHHHCCEEEEE AEGQRIEELLTHLDVATIGLPSINNPHADAFLAQGAVLLPHHLRNGEQTVAWYHGPLRAS CCCHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHCCCEEEHHHHCCCCEEEEEEECCCCCE LQVAAANYPHAVSADSLLRFDQRVGVFDVSYAAAWELGRLLGLQNQQFSQALYAWKSQQA EEEEECCCCCCCCHHHHHHHHHHCCEEEEHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHH SQSVSRLQARNTRYDHLPSFGRQVRARSLSEPIPPAIMNFVRRLSLLEGVPFSSLFPDER HHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCHHCCCCCC LLPLESIRFFSLDRAWLAALIDGALSIGRANIDHGNDGYLRLQIVQQLNLPTSISGFAIR CCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEEEHHCCCCCCCCCHHHH SSVIAGWSALEIEAKSSAGSRLEHLNEDTIRLGENMLLLLFADELASLSIHQHAQTIHFG HHHHCCCEEEEEEECCCCCHHHHHCCCHHHHHCCCEEEEEEECHHHHHHHHHHHEEEEEC LDRDSNGWHKTLRNGSEIRPLAWHDQQRQILDVAQLASQMSQTLNQPVHSGSFALQMIEG CCCCCCHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHH VARVTFERR HHHHHCCCC >Mature Secondary Structure SNDLIFAEHHLPALPLGKYSLTVTQTLSSTGQLPAGAEPIRQTDYRTTGEMLISGERWS CCCCEEECCCCCCCCCCCEEEEEEHHHHHCCCCCCCCCCHHHCCCCCCCCEEECCCCCC LPETLIGAVFPPVGSTGDHSTTLPHIMLTRSTLPWERTAQASGQLPWLALLVFNEDEKPT CHHHHHHHHCCCCCCCCCCCCCCCEEEEECCCCCCHHHHHCCCCCCEEEEEEECCCCCCC PKVLKRADLADPTVLYQLPTSESNETAADLVTVIDLPWATLQPLLPTLADLPLLTHVRRV HHHHHHCCCCCCEEEEECCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHCCHHHHHHHHC DVNEQAVVWANRIPQADRMSTVHLVSLEQRYDQTGFMAAGASAETMVRLVSLYSWQFACV CCCCCEEEEECCCCCCCCCCEEEEEEHHHHHCCCCCEECCCCHHHHHHHHHHHCCEEEEE AEGQRIEELLTHLDVATIGLPSINNPHADAFLAQGAVLLPHHLRNGEQTVAWYHGPLRAS CCCHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHCCCEEEHHHHCCCCEEEEEEECCCCCE LQVAAANYPHAVSADSLLRFDQRVGVFDVSYAAAWELGRLLGLQNQQFSQALYAWKSQQA EEEEECCCCCCCCHHHHHHHHHHCCEEEEHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHH SQSVSRLQARNTRYDHLPSFGRQVRARSLSEPIPPAIMNFVRRLSLLEGVPFSSLFPDER HHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCHHCCCCCC LLPLESIRFFSLDRAWLAALIDGALSIGRANIDHGNDGYLRLQIVQQLNLPTSISGFAIR CCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEEEHHCCCCCCCCCHHHH SSVIAGWSALEIEAKSSAGSRLEHLNEDTIRLGENMLLLLFADELASLSIHQHAQTIHFG HHHHCCCEEEEEEECCCCCHHHHHCCCHHHHHCCCEEEEEEECHHHHHHHHHHHEEEEEC LDRDSNGWHKTLRNGSEIRPLAWHDQQRQILDVAQLASQMSQTLNQPVHSGSFALQMIEG CCCCCCHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHH VARVTFERR HHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA