| Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
|---|---|
| Accession | NC_009972 |
| Length | 6,346,587 |
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The map label for this gene is hslJ [C]
Identifier: 159898504
GI number: 159898504
Start: 2435252
End: 2435701
Strand: Reverse
Name: hslJ [C]
Synonym: Haur_1980
Alternate gene names: 159898504
Gene position: 2435701-2435252 (Counterclockwise)
Preceding gene: 159898505
Following gene: 159898502
Centisome position: 38.38
GC content: 50.44
Gene sequence:
>450_bases ATGCGTCACATCTTAAGTATAGCCATTGCCGCCTTATTAATCGTTGGTTGTGGCAACCAAGCCGCCTCAACCAGCCAACC AACCAATACGCCCAGCATTATTGTTGATCCTGCAGAACTCATTGGCTCACGCTGGAATGTCTTAACCATCAATGGTCAGC CGATCATTGGGCCGAATCCCTTGCCATTGACAATCGACTCGGCCAGCCAAGTCTCGGGGAATGGTGGTTGCAATGGTTAT GGTGGCGGCATCACCATTGATGGCTCAAAATTGACCATCGGCCCACTCGTGTCAACATTAATGGCATGTGCCGAAGCCGA CTTGCAAGCCCAAGAAGGTAGCTTGCTCCAAAGCTTGGAAAAGGTTCGCAGCTACCAGCAAACTGAGACAACGTTAAGTT TGCTTGATGATCAAGGCACGGTCGTGGTCACTTTAGCTCGCCAACCCTAA
Upstream 100 bases:
>100_bases GACGGAATAATTTGGCAATTTGAAGATTAACGGTGATGGGAACATAACTTGATGGGTAATCGTTGTTAGTTCAACAACAA TCAAGTTATGGAGTTACCAG
Downstream 100 bases:
>100_bases GCTCCAAGCGCATTGCGTAGCCACATCCAAGCCTCAACTTTTTTGGCAAATGCTTGGGTATTGGCTGGGCTTGTCGATGG CAAACCCACCAGTTCAAGCC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 149; Mature: 149
Protein sequence:
>149_residues MRHILSIAIAALLIVGCGNQAASTSQPTNTPSIIVDPAELIGSRWNVLTINGQPIIGPNPLPLTIDSASQVSGNGGCNGY GGGITIDGSKLTIGPLVSTLMACAEADLQAQEGSLLQSLEKVRSYQQTETTLSLLDDQGTVVVTLARQP
Sequences:
>Translated_149_residues MRHILSIAIAALLIVGCGNQAASTSQPTNTPSIIVDPAELIGSRWNVLTINGQPIIGPNPLPLTIDSASQVSGNGGCNGY GGGITIDGSKLTIGPLVSTLMACAEADLQAQEGSLLQSLEKVRSYQQTETTLSLLDDQGTVVVTLARQP >Mature_149_residues MRHILSIAIAALLIVGCGNQAASTSQPTNTPSIIVDPAELIGSRWNVLTINGQPIIGPNPLPLTIDSASQVSGNGGCNGY GGGITIDGSKLTIGPLVSTLMACAEADLQAQEGSLLQSLEKVRSYQQTETTLSLLDDQGTVVVTLARQP
Specific function: Unknown
COG id: COG3187
COG function: function code O; Heat shock protein
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15352; Mature: 15352
Theoretical pI: Translated: 4.27; Mature: 4.27
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRHILSIAIAALLIVGCGNQAASTSQPTNTPSIIVDPAELIGSRWNVLTINGQPIIGPNP CHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEECCHHHHCCCCCEEEECCCCCCCCCC LPLTIDSASQVSGNGGCNGYGGGITIDGSKLTIGPLVSTLMACAEADLQAQEGSLLQSLE CEEEECCCCCCCCCCCCCCCCCCEEECCCEEEHHHHHHHHHHHHHCCCCCCCCHHHHHHH KVRSYQQTETTLSLLDDQGTVVVTLARQP HHHHHHHHHHHHHEECCCCCEEEEEECCC >Mature Secondary Structure MRHILSIAIAALLIVGCGNQAASTSQPTNTPSIIVDPAELIGSRWNVLTINGQPIIGPNP CHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEECCHHHHCCCCCEEEECCCCCCCCCC LPLTIDSASQVSGNGGCNGYGGGITIDGSKLTIGPLVSTLMACAEADLQAQEGSLLQSLE CEEEECCCCCCCCCCCCCCCCCCEEECCCEEEHHHHHHHHHHHHHCCCCCCCCHHHHHHH KVRSYQQTETTLSLLDDQGTVVVTLARQP HHHHHHHHHHHHHEECCCCCEEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA