| Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
|---|---|
| Accession | NC_009972 |
| Length | 6,346,587 |
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The map label for this gene is 159898502
Identifier: 159898502
GI number: 159898502
Start: 2434193
End: 2434654
Strand: Reverse
Name: 159898502
Synonym: Haur_1978
Alternate gene names: NA
Gene position: 2434654-2434193 (Counterclockwise)
Preceding gene: 159898504
Following gene: 159898501
Centisome position: 38.36
GC content: 47.4
Gene sequence:
>462_bases ATGCCTATCGGTCAGGTAGCGTTCGTTAATCACTGTGACATCGCCGCACCTCGCGAATTATGTTTTCGCTATATCAGCGA CTTTACTCACGATCCAGAATGGTGGCTGCCAGTTACCTCATCGCAACGCATTTGTGGCCAAGGGCTAGGAGCTATCTACG AGCAAGTTGCCAGCGTTGGGGTATTGCATTTTTCTTCGTTAATCGAAATCACTGCCTATCATCCTGAGCAGTCAATGGCC TTTACAATCACATCGCATGGGGTTATGCATTGCCAAGTACAGTATGATTTTAGTGACCATGGAGGAATTACGACCTTCAC GATGAGCAGCACTATCAGCTTTCTACCAATGTGGATTCGCTTGATTGCCCCTATTTTCAAGGGTCTCCTGATTCAACAAG TAACCAGCCATTTCGCCATTCTCAAACAGCAGATCGAGATGCTCGCTGCTGTGGAGGCTTAG
Upstream 100 bases:
>100_bases AGGCATACAACTCCTCATAGTGCCAACAAAAACAACCATTTTGCATCAATCTGCGGCTAGGTCTATACTAACATATGCCC AGTTTAGCAAGGAGACTCGT
Downstream 100 bases:
>100_bases GGTTAATCGATAGGGCTGGATGACGGCAAAACCTTGCAAGAAAGCCAGAGCATGGAATACCAAGAATCTGAAGTTCCCAG CCTTATTCGACGATTATTGC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 153; Mature: 152
Protein sequence:
>153_residues MPIGQVAFVNHCDIAAPRELCFRYISDFTHDPEWWLPVTSSQRICGQGLGAIYEQVASVGVLHFSSLIEITAYHPEQSMA FTITSHGVMHCQVQYDFSDHGGITTFTMSSTISFLPMWIRLIAPIFKGLLIQQVTSHFAILKQQIEMLAAVEA
Sequences:
>Translated_153_residues MPIGQVAFVNHCDIAAPRELCFRYISDFTHDPEWWLPVTSSQRICGQGLGAIYEQVASVGVLHFSSLIEITAYHPEQSMA FTITSHGVMHCQVQYDFSDHGGITTFTMSSTISFLPMWIRLIAPIFKGLLIQQVTSHFAILKQQIEMLAAVEA >Mature_152_residues PIGQVAFVNHCDIAAPRELCFRYISDFTHDPEWWLPVTSSQRICGQGLGAIYEQVASVGVLHFSSLIEITAYHPEQSMAF TITSHGVMHCQVQYDFSDHGGITTFTMSSTISFLPMWIRLIAPIFKGLLIQQVTSHFAILKQQIEMLAAVEA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17118; Mature: 16987
Theoretical pI: Translated: 6.05; Mature: 6.05
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.6 %Cys (Translated Protein) 3.9 %Met (Translated Protein) 6.5 %Cys+Met (Translated Protein) 2.6 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 5.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPIGQVAFVNHCDIAAPRELCFRYISDFTHDPEWWLPVTSSQRICGQGLGAIYEQVASVG CCCCCEEEECCCCCCCHHHHHHHHHHHCCCCCCCEEECCCCCHHHHHHHHHHHHHHHHHH VLHFSSLIEITAYHPEQSMAFTITSHGVMHCQVQYDFSDHGGITTFTMSSTISFLPMWIR HHHHHHHHHHEEECCCCCEEEEEECCCEEEEEEEECCCCCCCEEEEEHHHHHHHHHHHHH LIAPIFKGLLIQQVTSHFAILKQQIEMLAAVEA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure PIGQVAFVNHCDIAAPRELCFRYISDFTHDPEWWLPVTSSQRICGQGLGAIYEQVASVG CCCCEEEECCCCCCCHHHHHHHHHHHCCCCCCCEEECCCCCHHHHHHHHHHHHHHHHHH VLHFSSLIEITAYHPEQSMAFTITSHGVMHCQVQYDFSDHGGITTFTMSSTISFLPMWIR HHHHHHHHHHEEECCCCCEEEEEECCCEEEEEEEECCCCCCCEEEEEHHHHHHHHHHHHH LIAPIFKGLLIQQVTSHFAILKQQIEMLAAVEA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA