| Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
|---|---|
| Accession | NC_009972 |
| Length | 6,346,587 |
Click here to switch to the map view.
The map label for this gene is 159898444
Identifier: 159898444
GI number: 159898444
Start: 2314499
End: 2316658
Strand: Direct
Name: 159898444
Synonym: Haur_1920
Alternate gene names: NA
Gene position: 2314499-2316658 (Clockwise)
Preceding gene: 159898443
Following gene: 159898445
Centisome position: 36.47
GC content: 38.89
Gene sequence:
>2160_bases ATGAAAAAGCACATTCGTAAGATAGAAAATGATAACCGTATTGCAATTGCGCCTTACAATTTTGTGCCCCTACCGGATCG GGTTATCACGCTTGATCCTGATAAAGATAAGATCGATCACGCTAGGTATGCTAATAATAGAAATACTGGGCAAATTGACT GTAAACTGACAACGGAAACGGATCTCTATATTCGCAGCGGATTAACTGCCAGCGAATTTGCAGCGTCGCAACAAAATGCC CAACCCGTAGATCCTCCCCAACGTGCTAGTTTAGAAGAATTAATCGCAGTATTACAAACCAACCCGAAAAATAAACCCCA ATTTTTCTCCACTACCAATAGCAATCAACCTGTAATTCCGGCTAGCTCGTTGCGCGGCATGATTCGTTCCTTGGTCGAGA TTGCTAGTTTTAGCAAAGTTGGCTGGGTGAGTGATAATCCTCAATTCTTTTTTCGAGCAGTAGCCGACAATAAGAGATCT ATAGGGATCTATTATAAAAATAAAATTAAAAATGTTCAGGCAGGGTATGTTTGTAAAATTGGAGATAAATGGGTAATATT CAAAGCGAAAGTTATTAATGGGAAAAATTTTTGTTGGTATAAACCTTGGAATTCCTTGAACGACGATATTATCAGAGAAA TTGGCATATCTATGTTTAATGATAATGATTTTTCTATAGGTTATAAGCCAATATATTTTGATAATCCGAATTTTGATGAA CACAGAAAATTTATAACAGATAGAATATCAGTAAGAAATAATTTGAATAATAAAGGATTTATAACTAATAGTGGTAATAT GTTAGAAACAGGTGAGGAAGGAAATAGTAATAGGAAGAATTATTGTATTATTTTTGAGAAATCTCAAGAGCATAAATACA CAATCAATGATCAAGCAATCTATGACTACTGTAATAATCTGACTGAATTTCAAAAATTATTAGGCGAAAAAGGATGTCTG ATAAATGGTCGTCCTATTTTCTTCATTGAGCCTACTCAAGAAAAAGGGGAAGTTATTTATTTTGGGCATAGTCCTAATTT TCGTTTGGCTTATCGTAGGGATGATCTCGATAAAGCAGTATCAGCCTTGGATTGTCTCCCTTCTGAAATCAGTAGTAACT TAAATATACCTGATCTGGCCGAATCAATCTTTGGTTATGTGCGTCAAACCAAAACAAATGATCAGAATCGGGCTGCCGTT AACAATAGCTTGTCTCAAGAGGGAGAAAAAAAGCAAGCCTTAGCCGGGCGGGTATTTTTTAGTAATGCCCATCTCTCGCC TGAACAAGGTGATGTATTAAAAGAAACACACATTCCGCAGATTTTGGCTAGCCCGAAACCAACAACCTTCCAGCATTATT TGGTTCAAATAGATCCTGCGCAAGATCAATTAGCGCATTATTCAACCAAAGGTGCTGTAATTCGTGGGCGTAAACTGTAT TGGCATCAACAACCTTCAAATGCTTATACGACCGATATTAAACAGGTTGAAAAAGCTCAAACCCAATACACTTGCATTAC TCCTGTAAACCCAGGCACAACTTTTGAATTCACCATTCGCTTTGAAAATTTGAGCGATGTTGAATTAGGGGCGTTGTTAT GGGTGCTGGATCTCGCTTCATGTGCAGGAAAATATCGCTTTAAACTGGGTATGGGCAAGCCTTTAGGCCTTGGTTCAGTG GCGATTAATTATGAGTTGCAATTGACTGACCGCAAACAGCGCTATCAGCGCTTGTTTGCTCGTGATGGCAATTGGGAGAC GGGTTTTGAACCATCAAGCCAAGCGACCCAAACCAAGGCGATTGATGCCTTTTGTAAGTTTATTGATGATAACCTTGGTA TGGATATTGAGGAGACCGAACAAATTCAACAACTTAGATCATTGTTAGCCTACCGTAACGGCGAAGGAATTTTATTTGCA GGGTTTTCGAGTGGTGAAGACTCAGCCTTACGTTATATGGAGATTGAACGGAATACCAAGATGTCGTTTTTGCCAAGTCA AGAGGATAAAAAAAATAAGGAAGCAATGATCAATGAATATGATGATCGTAGAGTTTTGCCAAAACCTTCGCAAGTTGCAC CGCCACCTCCCCGAGAATTACCACGACCACCAATCGCAGATGATCCAATAAAGGTTACGGTGCGCCGTGTCACACGATGA
Upstream 100 bases:
>100_bases TGGTGTTGCACCATTCAATCGAATTCGATGAACATGGAATCGCCACAATTCGCGCTAGCCGCTATGTTGATTTGCGTTGG CAAACTCAAGGAGCTGAAGT
Downstream 100 bases:
>100_bases CAGATCACCCGTTCAACGGGTAGGGATTGGCTCGAATATCCTTGGTTCACCAGCCTTACCTAGCGTGGAAACACAAAGGG GACAGCAGCATGGCTGGAAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 719; Mature: 719
Protein sequence:
>719_residues MKKHIRKIENDNRIAIAPYNFVPLPDRVITLDPDKDKIDHARYANNRNTGQIDCKLTTETDLYIRSGLTASEFAASQQNA QPVDPPQRASLEELIAVLQTNPKNKPQFFSTTNSNQPVIPASSLRGMIRSLVEIASFSKVGWVSDNPQFFFRAVADNKRS IGIYYKNKIKNVQAGYVCKIGDKWVIFKAKVINGKNFCWYKPWNSLNDDIIREIGISMFNDNDFSIGYKPIYFDNPNFDE HRKFITDRISVRNNLNNKGFITNSGNMLETGEEGNSNRKNYCIIFEKSQEHKYTINDQAIYDYCNNLTEFQKLLGEKGCL INGRPIFFIEPTQEKGEVIYFGHSPNFRLAYRRDDLDKAVSALDCLPSEISSNLNIPDLAESIFGYVRQTKTNDQNRAAV NNSLSQEGEKKQALAGRVFFSNAHLSPEQGDVLKETHIPQILASPKPTTFQHYLVQIDPAQDQLAHYSTKGAVIRGRKLY WHQQPSNAYTTDIKQVEKAQTQYTCITPVNPGTTFEFTIRFENLSDVELGALLWVLDLASCAGKYRFKLGMGKPLGLGSV AINYELQLTDRKQRYQRLFARDGNWETGFEPSSQATQTKAIDAFCKFIDDNLGMDIEETEQIQQLRSLLAYRNGEGILFA GFSSGEDSALRYMEIERNTKMSFLPSQEDKKNKEAMINEYDDRRVLPKPSQVAPPPPRELPRPPIADDPIKVTVRRVTR
Sequences:
>Translated_719_residues MKKHIRKIENDNRIAIAPYNFVPLPDRVITLDPDKDKIDHARYANNRNTGQIDCKLTTETDLYIRSGLTASEFAASQQNA QPVDPPQRASLEELIAVLQTNPKNKPQFFSTTNSNQPVIPASSLRGMIRSLVEIASFSKVGWVSDNPQFFFRAVADNKRS IGIYYKNKIKNVQAGYVCKIGDKWVIFKAKVINGKNFCWYKPWNSLNDDIIREIGISMFNDNDFSIGYKPIYFDNPNFDE HRKFITDRISVRNNLNNKGFITNSGNMLETGEEGNSNRKNYCIIFEKSQEHKYTINDQAIYDYCNNLTEFQKLLGEKGCL INGRPIFFIEPTQEKGEVIYFGHSPNFRLAYRRDDLDKAVSALDCLPSEISSNLNIPDLAESIFGYVRQTKTNDQNRAAV NNSLSQEGEKKQALAGRVFFSNAHLSPEQGDVLKETHIPQILASPKPTTFQHYLVQIDPAQDQLAHYSTKGAVIRGRKLY WHQQPSNAYTTDIKQVEKAQTQYTCITPVNPGTTFEFTIRFENLSDVELGALLWVLDLASCAGKYRFKLGMGKPLGLGSV AINYELQLTDRKQRYQRLFARDGNWETGFEPSSQATQTKAIDAFCKFIDDNLGMDIEETEQIQQLRSLLAYRNGEGILFA GFSSGEDSALRYMEIERNTKMSFLPSQEDKKNKEAMINEYDDRRVLPKPSQVAPPPPRELPRPPIADDPIKVTVRRVTR >Mature_719_residues MKKHIRKIENDNRIAIAPYNFVPLPDRVITLDPDKDKIDHARYANNRNTGQIDCKLTTETDLYIRSGLTASEFAASQQNA QPVDPPQRASLEELIAVLQTNPKNKPQFFSTTNSNQPVIPASSLRGMIRSLVEIASFSKVGWVSDNPQFFFRAVADNKRS IGIYYKNKIKNVQAGYVCKIGDKWVIFKAKVINGKNFCWYKPWNSLNDDIIREIGISMFNDNDFSIGYKPIYFDNPNFDE HRKFITDRISVRNNLNNKGFITNSGNMLETGEEGNSNRKNYCIIFEKSQEHKYTINDQAIYDYCNNLTEFQKLLGEKGCL INGRPIFFIEPTQEKGEVIYFGHSPNFRLAYRRDDLDKAVSALDCLPSEISSNLNIPDLAESIFGYVRQTKTNDQNRAAV NNSLSQEGEKKQALAGRVFFSNAHLSPEQGDVLKETHIPQILASPKPTTFQHYLVQIDPAQDQLAHYSTKGAVIRGRKLY WHQQPSNAYTTDIKQVEKAQTQYTCITPVNPGTTFEFTIRFENLSDVELGALLWVLDLASCAGKYRFKLGMGKPLGLGSV AINYELQLTDRKQRYQRLFARDGNWETGFEPSSQATQTKAIDAFCKFIDDNLGMDIEETEQIQQLRSLLAYRNGEGILFA GFSSGEDSALRYMEIERNTKMSFLPSQEDKKNKEAMINEYDDRRVLPKPSQVAPPPPRELPRPPIADDPIKVTVRRVTR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 81902; Mature: 81902
Theoretical pI: Translated: 8.35; Mature: 8.35
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKHIRKIENDNRIAIAPYNFVPLPDRVITLDPDKDKIDHARYANNRNTGQIDCKLTTET CCCHHHHHCCCCEEEEECCCCCCCCCEEEEECCCCCHHHHHHHCCCCCCCEEEEEEECCC DLYIRSGLTASEFAASQQNAQPVDPPQRASLEELIAVLQTNPKNKPQFFSTTNSNQPVIP CEEEECCCCHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCEEEECCCCCCCCC ASSLRGMIRSLVEIASFSKVGWVSDNPQFFFRAVADNKRSIGIYYKNKIKNVQAGYVCKI HHHHHHHHHHHHHHHHCCCCCCCCCCHHEEEEEECCCCCEEEEEEECCCCCCCCCEEEEE GDKWVIFKAKVINGKNFCWYKPWNSLNDDIIREIGISMFNDNDFSIGYKPIYFDNPNFDE CCEEEEEEEEEECCCCEEEECCCCCCCHHHHHHHCCEEECCCCCCCCEEEEEECCCCHHH HRKFITDRISVRNNLNNKGFITNSGNMLETGEEGNSNRKNYCIIFEKSQEHKYTINDQAI HHHHHHHHHHHHCCCCCCCEEECCCCEEECCCCCCCCCCCEEEEEECCCCCEEEECCHHH YDYCNNLTEFQKLLGEKGCLINGRPIFFIEPTQEKGEVIYFGHSPNFRLAYRRDDLDKAV HHHHCCHHHHHHHHCCCCCEECCCEEEEECCCCCCCCEEEEECCCCEEEEEECCCHHHHH SALDCLPSEISSNLNIPDLAESIFGYVRQTKTNDQNRAAVNNSLSQEGEKKQALAGRVFF HHHHHCHHHHHCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHCCHHHCCHHHHHHEEEEEE SNAHLSPEQGDVLKETHIPQILASPKPTTFQHYLVQIDPAQDQLAHYSTKGAVIRGRKLY ECCCCCCCCCCHHHHHCCCHHHCCCCCCCEEEEEEEECCCHHHHHHHCCCCCEEECCEEE WHQQPSNAYTTDIKQVEKAQTQYTCITPVNPGTTFEFTIRFENLSDVELGALLWVLDLAS EEECCCCCHHHHHHHHHHHCCCEEEEEECCCCCEEEEEEEECCCCCCHHHHHHHHHHHHH CAGKYRFKLGMGKPLGLGSVAINYELQLTDRKQRYQRLFARDGNWETGFEPSSQATQTKA HCCCEEEEECCCCCCCCCEEEEEEEEEECCHHHHHHHHHHCCCCCCCCCCCCCHHHHHHH IDAFCKFIDDNLGMDIEETEQIQQLRSLLAYRNGEGILFAGFSSGEDSALRYMEIERNTK HHHHHHHHHHCCCCCHHHHHHHHHHHHHHHEECCCEEEEEECCCCCCCEEEEEEECCCCC MSFLPSQEDKKNKEAMINEYDDRRVLPKPSQVAPPPPRELPRPPIADDPIKVTVRRVTR EEECCCCCCCCCHHHHHCCCCCCCCCCCCCCCCCCCCHHCCCCCCCCCCCEEEEEECCC >Mature Secondary Structure MKKHIRKIENDNRIAIAPYNFVPLPDRVITLDPDKDKIDHARYANNRNTGQIDCKLTTET CCCHHHHHCCCCEEEEECCCCCCCCCEEEEECCCCCHHHHHHHCCCCCCCEEEEEEECCC DLYIRSGLTASEFAASQQNAQPVDPPQRASLEELIAVLQTNPKNKPQFFSTTNSNQPVIP CEEEECCCCHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCEEEECCCCCCCCC ASSLRGMIRSLVEIASFSKVGWVSDNPQFFFRAVADNKRSIGIYYKNKIKNVQAGYVCKI HHHHHHHHHHHHHHHHCCCCCCCCCCHHEEEEEECCCCCEEEEEEECCCCCCCCCEEEEE GDKWVIFKAKVINGKNFCWYKPWNSLNDDIIREIGISMFNDNDFSIGYKPIYFDNPNFDE CCEEEEEEEEEECCCCEEEECCCCCCCHHHHHHHCCEEECCCCCCCCEEEEEECCCCHHH HRKFITDRISVRNNLNNKGFITNSGNMLETGEEGNSNRKNYCIIFEKSQEHKYTINDQAI HHHHHHHHHHHHCCCCCCCEEECCCCEEECCCCCCCCCCCEEEEEECCCCCEEEECCHHH YDYCNNLTEFQKLLGEKGCLINGRPIFFIEPTQEKGEVIYFGHSPNFRLAYRRDDLDKAV HHHHCCHHHHHHHHCCCCCEECCCEEEEECCCCCCCCEEEEECCCCEEEEEECCCHHHHH SALDCLPSEISSNLNIPDLAESIFGYVRQTKTNDQNRAAVNNSLSQEGEKKQALAGRVFF HHHHHCHHHHHCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHCCHHHCCHHHHHHEEEEEE SNAHLSPEQGDVLKETHIPQILASPKPTTFQHYLVQIDPAQDQLAHYSTKGAVIRGRKLY ECCCCCCCCCCHHHHHCCCHHHCCCCCCCEEEEEEEECCCHHHHHHHCCCCCEEECCEEE WHQQPSNAYTTDIKQVEKAQTQYTCITPVNPGTTFEFTIRFENLSDVELGALLWVLDLAS EEECCCCCHHHHHHHHHHHCCCEEEEEECCCCCEEEEEEEECCCCCCHHHHHHHHHHHHH CAGKYRFKLGMGKPLGLGSVAINYELQLTDRKQRYQRLFARDGNWETGFEPSSQATQTKA HCCCEEEEECCCCCCCCCEEEEEEEEEECCHHHHHHHHHHCCCCCCCCCCCCCHHHHHHH IDAFCKFIDDNLGMDIEETEQIQQLRSLLAYRNGEGILFAGFSSGEDSALRYMEIERNTK HHHHHHHHHHCCCCCHHHHHHHHHHHHHHHEECCCEEEEEECCCCCCCEEEEEEECCCCC MSFLPSQEDKKNKEAMINEYDDRRVLPKPSQVAPPPPRELPRPPIADDPIKVTVRRVTR EEECCCCCCCCCHHHHHCCCCCCCCCCCCCCCCCCCCHHCCCCCCCCCCCEEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA