Definition Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome.
Accession NC_009972
Length 6,346,587

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The map label for this gene is 159898439

Identifier: 159898439

GI number: 159898439

Start: 2308474

End: 2310057

Strand: Direct

Name: 159898439

Synonym: Haur_1915

Alternate gene names: NA

Gene position: 2308474-2310057 (Clockwise)

Preceding gene: 159898438

Following gene: 159898440

Centisome position: 36.37

GC content: 42.87

Gene sequence:

>1584_bases
ATGACTCCAGTTTTAGTGTTGATCGAAACCAGTGGAATTCAACAGTACATCTTTGGCAGTAACCGCCTACGTGAACAAAT
TGGCGCATCACATCTCGTTGATCAAGTGACTGATACTTGGTTACAAGAATATGGTTTCTCGGAAGCTGAGCCTCTATTAC
CACCAAAAGAACTTCCCGCTGCCCAAATTCTTTGGAGTGGTGGCGGTAATACGCGGCTATTATTTGCTAACAGTGAATTA
GCGGTTCAATTTACCCGCACATGGAGCGAAAAACTATTGCGTGAAGCTCCCGATTTGCGCTGTTTGGTGGTACATCAAGC
CTGGAATGAGAATTTAAATGAAACTCATCGGCAGGCGCTCGCACAGATGCGCCTTAAGAAGCAGACAACCCCAACCCAAA
CACCCAGTCTTGGCCTTGCAGTGAATGCCTTTTGCCAATCAACCGGTATGCCCGCAACAGGTTTTAATCGAGCTACCGAT
AAAGAAGCACCAGAGTTGTATCCAGTTTCGCATGCGGTTGCTGCAAAATTGGTTTCACTTAAAGATGCAAACGACAGGTT
GGATGAAACATTACTTAGTGCTGAGCAAGCTAAAAAATATGTATTTCCCTACGATTTCGATAACCTTGGGCGGAGTGAAC
ATGAACATAGCTATATCGCCGTGGTGCATATTGATGGCAATGGTATGGGCAAGCGCTTTGCAGCAATTCAGCAAAAATAT
CGGGATGATGACCAAGGGTATTTAGAAAAAGTACGCAAATTATCTGAGCTAGTGAGATGCGCAAGCAAAAAAGCTTTACA
GGAATGTGTAAGGCTTGTTATAAAACAAATTATTGATACGAAAGAGCTTAAAGCAAGCATTCTGTCTGATAAAAAGCCTC
CTAAAAAAGCTTTTCGATTTCCGTCGTTAGAAAATGAGTCTGAACAGTTTTTCTATTTAAACGATACACGACAAGGAGAT
CAAACATTTCTGCCGTTTCGGCCAATTATTTATGGTGGCGATGATGTGACCTTTGTGTGTGATGGACGGCTGGGAATTGC
CCTCGCGATTAAGTTTCTCCAAGCGTTTAACCAAGCAAGTGCTCCCGAAAACTTGCATGGGTGTGCTGGGATCGCAATTG
TTAAGGCCCACTACCCTTTTGCGCGAGCCTACGATTTAGCCGAACAGTTGTGTAGCTCGGCTAAGCAGAAAATTGGCGAC
CATAAGGCCTCAGCAATCGATTGGCAAATTGCCATGACTGGAATTACTGGATCATTGGGAGAGATTCGTGAGCGTGAATA
TCAAACAACTTCTGGTGCATCACTGAGTCTACGTCCAGTTTCAATTACTGAGAATGCGCCATCAGATATGGTTGATTGGA
ATTCGGTAGCAGAAATTATTGATAACCTCCGATCGAGCGAATGGACTGATAAGAAAAATAAAATAATGCAACTGCGCGAA
GTTCTACGCCAAGGCTCAGATAAAGTCGCTGAATTTGAAAAATTATACAAGATTGATATTAATCGAGGATGGATTGATAA
CGTATGTATGTACTTTGATCCAATTGAATTACTTGATTTTTATTATCCGTTGGAGGCCCGATGA

Upstream 100 bases:

>100_bases
AGTCTTTTAATAACTAGGTTTTGTTGATAGTTTTTGATATAATCTGGTTACTCATTTACTCCATTACCCTCTTTTGGAGT
GTTACGGAGGATTCCCCCAT

Downstream 100 bases:

>100_bases
GCAGCTACACAATCAAAATTACACTATTGAGCGATACAACTTTTGGGACTGGTGATGGCATTGTTGGTTTAATTGATCAA
GAAGTTGAATATGATCAGTA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 527; Mature: 526

Protein sequence:

>527_residues
MTPVLVLIETSGIQQYIFGSNRLREQIGASHLVDQVTDTWLQEYGFSEAEPLLPPKELPAAQILWSGGGNTRLLFANSEL
AVQFTRTWSEKLLREAPDLRCLVVHQAWNENLNETHRQALAQMRLKKQTTPTQTPSLGLAVNAFCQSTGMPATGFNRATD
KEAPELYPVSHAVAAKLVSLKDANDRLDETLLSAEQAKKYVFPYDFDNLGRSEHEHSYIAVVHIDGNGMGKRFAAIQQKY
RDDDQGYLEKVRKLSELVRCASKKALQECVRLVIKQIIDTKELKASILSDKKPPKKAFRFPSLENESEQFFYLNDTRQGD
QTFLPFRPIIYGGDDVTFVCDGRLGIALAIKFLQAFNQASAPENLHGCAGIAIVKAHYPFARAYDLAEQLCSSAKQKIGD
HKASAIDWQIAMTGITGSLGEIREREYQTTSGASLSLRPVSITENAPSDMVDWNSVAEIIDNLRSSEWTDKKNKIMQLRE
VLRQGSDKVAEFEKLYKIDINRGWIDNVCMYFDPIELLDFYYPLEAR

Sequences:

>Translated_527_residues
MTPVLVLIETSGIQQYIFGSNRLREQIGASHLVDQVTDTWLQEYGFSEAEPLLPPKELPAAQILWSGGGNTRLLFANSEL
AVQFTRTWSEKLLREAPDLRCLVVHQAWNENLNETHRQALAQMRLKKQTTPTQTPSLGLAVNAFCQSTGMPATGFNRATD
KEAPELYPVSHAVAAKLVSLKDANDRLDETLLSAEQAKKYVFPYDFDNLGRSEHEHSYIAVVHIDGNGMGKRFAAIQQKY
RDDDQGYLEKVRKLSELVRCASKKALQECVRLVIKQIIDTKELKASILSDKKPPKKAFRFPSLENESEQFFYLNDTRQGD
QTFLPFRPIIYGGDDVTFVCDGRLGIALAIKFLQAFNQASAPENLHGCAGIAIVKAHYPFARAYDLAEQLCSSAKQKIGD
HKASAIDWQIAMTGITGSLGEIREREYQTTSGASLSLRPVSITENAPSDMVDWNSVAEIIDNLRSSEWTDKKNKIMQLRE
VLRQGSDKVAEFEKLYKIDINRGWIDNVCMYFDPIELLDFYYPLEAR
>Mature_526_residues
TPVLVLIETSGIQQYIFGSNRLREQIGASHLVDQVTDTWLQEYGFSEAEPLLPPKELPAAQILWSGGGNTRLLFANSELA
VQFTRTWSEKLLREAPDLRCLVVHQAWNENLNETHRQALAQMRLKKQTTPTQTPSLGLAVNAFCQSTGMPATGFNRATDK
EAPELYPVSHAVAAKLVSLKDANDRLDETLLSAEQAKKYVFPYDFDNLGRSEHEHSYIAVVHIDGNGMGKRFAAIQQKYR
DDDQGYLEKVRKLSELVRCASKKALQECVRLVIKQIIDTKELKASILSDKKPPKKAFRFPSLENESEQFFYLNDTRQGDQ
TFLPFRPIIYGGDDVTFVCDGRLGIALAIKFLQAFNQASAPENLHGCAGIAIVKAHYPFARAYDLAEQLCSSAKQKIGDH
KASAIDWQIAMTGITGSLGEIREREYQTTSGASLSLRPVSITENAPSDMVDWNSVAEIIDNLRSSEWTDKKNKIMQLREV
LRQGSDKVAEFEKLYKIDINRGWIDNVCMYFDPIELLDFYYPLEAR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 59410; Mature: 59279

Theoretical pI: Translated: 6.21; Mature: 6.21

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTPVLVLIETSGIQQYIFGSNRLREQIGASHLVDQVTDTWLQEYGFSEAEPLLPPKELPA
CCCEEEEEECCCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCC
AQILWSGGGNTRLLFANSELAVQFTRTWSEKLLREAPDLRCLVVHQAWNENLNETHRQAL
EEEEECCCCCEEEEEECCCEEEEEHHHHHHHHHHHCCCCEEEEEEHHHCCCHHHHHHHHH
AQMRLKKQTTPTQTPSLGLAVNAFCQSTGMPATGFNRATDKEAPELYPVSHAVAAKLVSL
HHHHHHHCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHH
KDANDRLDETLLSAEQAKKYVFPYDFDNLGRSEHEHSYIAVVHIDGNGMGKRFAAIQQKY
CCCHHHHHHHHHHHHHHHCEECCCCHHHCCCCCCCCCEEEEEEECCCCCHHHHHHHHHHH
RDDDQGYLEKVRKLSELVRCASKKALQECVRLVIKQIIDTKELKASILSDKKPPKKAFRF
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHCCCCCHHHHHCC
PSLENESEQFFYLNDTRQGDQTFLPFRPIIYGGDDVTFVCDGRLGIALAIKFLQAFNQAS
CCCCCCCCCEEEEECCCCCCCCCCCCCCEEECCCCEEEEECCCHHHHHHHHHHHHHHHCC
APENLHGCAGIAIVKAHYPFARAYDLAEQLCSSAKQKIGDHKASAIDWQIAMTGITGSLG
CCCCCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEEECCCCCHH
EIREREYQTTSGASLSLRPVSITENAPSDMVDWNSVAEIIDNLRSSEWTDKKNKIMQLRE
HHHHHHHCCCCCCEEEEEEEEECCCCCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHH
VLRQGSDKVAEFEKLYKIDINRGWIDNVCMYFDPIELLDFYYPLEAR
HHHCCCHHHHHHHHHHEEECCCCCHHHHHHHCCHHHHHHHHCCCCCC
>Mature Secondary Structure 
TPVLVLIETSGIQQYIFGSNRLREQIGASHLVDQVTDTWLQEYGFSEAEPLLPPKELPA
CCEEEEEECCCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCC
AQILWSGGGNTRLLFANSELAVQFTRTWSEKLLREAPDLRCLVVHQAWNENLNETHRQAL
EEEEECCCCCEEEEEECCCEEEEEHHHHHHHHHHHCCCCEEEEEEHHHCCCHHHHHHHHH
AQMRLKKQTTPTQTPSLGLAVNAFCQSTGMPATGFNRATDKEAPELYPVSHAVAAKLVSL
HHHHHHHCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHH
KDANDRLDETLLSAEQAKKYVFPYDFDNLGRSEHEHSYIAVVHIDGNGMGKRFAAIQQKY
CCCHHHHHHHHHHHHHHHCEECCCCHHHCCCCCCCCCEEEEEEECCCCCHHHHHHHHHHH
RDDDQGYLEKVRKLSELVRCASKKALQECVRLVIKQIIDTKELKASILSDKKPPKKAFRF
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHCCCCCHHHHHCC
PSLENESEQFFYLNDTRQGDQTFLPFRPIIYGGDDVTFVCDGRLGIALAIKFLQAFNQAS
CCCCCCCCCEEEEECCCCCCCCCCCCCCEEECCCCEEEEECCCHHHHHHHHHHHHHHHCC
APENLHGCAGIAIVKAHYPFARAYDLAEQLCSSAKQKIGDHKASAIDWQIAMTGITGSLG
CCCCCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEEECCCCCHH
EIREREYQTTSGASLSLRPVSITENAPSDMVDWNSVAEIIDNLRSSEWTDKKNKIMQLRE
HHHHHHHCCCCCCEEEEEEEEECCCCCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHH
VLRQGSDKVAEFEKLYKIDINRGWIDNVCMYFDPIELLDFYYPLEAR
HHHCCCHHHHHHHHHHEEECCCCCHHHHHHHCCHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA