| Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
|---|---|
| Accession | NC_009972 |
| Length | 6,346,587 |
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The map label for this gene is celC307 [H]
Identifier: 159898426
GI number: 159898426
Start: 2294773
End: 2295852
Strand: Direct
Name: celC307 [H]
Synonym: Haur_1902
Alternate gene names: 159898426
Gene position: 2294773-2295852 (Clockwise)
Preceding gene: 159898425
Following gene: 159898428
Centisome position: 36.16
GC content: 49.91
Gene sequence:
>1080_bases ATGACAACGTTGTCGAACCCAAAAACGGCGATTAGCGATACACGGTTTGCCAAGCTAGCCCGTGGCATTAATTTAAGCCA TTGGTTTGCCCAAGATTATACCAACCAATATAGTTTGGAGCATTTGCGCACGTACAACACCGAGGCCGATATTGCGCTGC TAGCCAAGCTTGGTTGTAGCCATTTGCGCTTTACGCTCAACCCAGTTGTGCTGCTGAATGAGAGCAATCCAACCGAGTTG AATCCTAGCTATTTGGCCGAAGTTGATCGGGTGATCGATTTGATGTTGGCCCATGATTTGGCGGTCATTGTCGATTTACA CCCCGAAGACGATTTTAAGCAGCGTTTGTTTAGCTCGCCCAGCTTGGTCAAAATCTTTGCTAGTTTCTGGCAACGTTTGG CTGCTCACTTGGCTCAGCGTGATCCAGAAATGCTCTTTTTAGAGGTCTTGAACGAACCAGTCGTGACCGATGCTCAGCAA TGGGCTTTTGTCCAAGCCGAATTATTGGCGGCGATGCGGGCTGGCGCACCCAACCATACCTTGATTGCAACTGGCCATAA ATGGTCGAGCATTACCGAGTTGTTAGAGCTTGAGCCATTGGCTGATCCGAATATTATCTACAATTTCCACTGTTATGATC CGCATACTTTTACGCATCAGGCGGCAACCTGGGGCGCACCCTACTGGCCGTATCTCGAATATTTGCCCTATCCATCGAGT CCCGAAGCCTTAGCCCCGATTGTGGCGACGATTGATGACGACGTTGCGCGTGATGCTGCAATTAACTATGGCAACGAACG CTGGAACATTGATACGCTACGTGAGTGGATTGGCCAAGCGGCGGCATGGGCTGAGCAGCATCAAGTGCGTTTGACCTGCA ACGAATTTGGGGTCTATCGCTTCAAAAGCAAGCCTGAAGATCGGGCGGCGTGGTTGCATGATCTGCGCAGCGTGCTTGAA GAATTTAATATTGGCTGGACGATGTGGGATTATGCAGGTGGATTTAGCGTGGTCAATCAACTGAGTGGTCAGCGTGAAAT TGATGCGCTGACGGTCGAAGCCCTCGGTTTACAGCAATAA
Upstream 100 bases:
>100_bases AACGCCCGCGCCTGAACGAAGACGCAGCAGGAGCCTAATTGATTAATTGAACAAACACGAAGCCTTAGTTGCTTCGTGTT TTTGTGTGTGAGGAATGATC
Downstream 100 bases:
>100_bases TTTAATCAAGCCGTAGCACAATCAACATGCTACGGCTTGATCATTTAAACCATTGCCATTTGTTGAATCGCAGTGCGCAA ATTGGGGTAGGTAACCAGGG
Product: glycoside hydrolase family protein
Products: NA
Alternate protein names: Cellulase C307; Endo-1,4-beta-glucanase C307 [H]
Number of amino acids: Translated: 359; Mature: 358
Protein sequence:
>359_residues MTTLSNPKTAISDTRFAKLARGINLSHWFAQDYTNQYSLEHLRTYNTEADIALLAKLGCSHLRFTLNPVVLLNESNPTEL NPSYLAEVDRVIDLMLAHDLAVIVDLHPEDDFKQRLFSSPSLVKIFASFWQRLAAHLAQRDPEMLFLEVLNEPVVTDAQQ WAFVQAELLAAMRAGAPNHTLIATGHKWSSITELLELEPLADPNIIYNFHCYDPHTFTHQAATWGAPYWPYLEYLPYPSS PEALAPIVATIDDDVARDAAINYGNERWNIDTLREWIGQAAAWAEQHQVRLTCNEFGVYRFKSKPEDRAAWLHDLRSVLE EFNIGWTMWDYAGGFSVVNQLSGQREIDALTVEALGLQQ
Sequences:
>Translated_359_residues MTTLSNPKTAISDTRFAKLARGINLSHWFAQDYTNQYSLEHLRTYNTEADIALLAKLGCSHLRFTLNPVVLLNESNPTEL NPSYLAEVDRVIDLMLAHDLAVIVDLHPEDDFKQRLFSSPSLVKIFASFWQRLAAHLAQRDPEMLFLEVLNEPVVTDAQQ WAFVQAELLAAMRAGAPNHTLIATGHKWSSITELLELEPLADPNIIYNFHCYDPHTFTHQAATWGAPYWPYLEYLPYPSS PEALAPIVATIDDDVARDAAINYGNERWNIDTLREWIGQAAAWAEQHQVRLTCNEFGVYRFKSKPEDRAAWLHDLRSVLE EFNIGWTMWDYAGGFSVVNQLSGQREIDALTVEALGLQQ >Mature_358_residues TTLSNPKTAISDTRFAKLARGINLSHWFAQDYTNQYSLEHLRTYNTEADIALLAKLGCSHLRFTLNPVVLLNESNPTELN PSYLAEVDRVIDLMLAHDLAVIVDLHPEDDFKQRLFSSPSLVKIFASFWQRLAAHLAQRDPEMLFLEVLNEPVVTDAQQW AFVQAELLAAMRAGAPNHTLIATGHKWSSITELLELEPLADPNIIYNFHCYDPHTFTHQAATWGAPYWPYLEYLPYPSSP EALAPIVATIDDDVARDAAINYGNERWNIDTLREWIGQAAAWAEQHQVRLTCNEFGVYRFKSKPEDRAAWLHDLRSVLEE FNIGWTMWDYAGGFSVVNQLSGQREIDALTVEALGLQQ
Specific function: This enzyme catalyzes the endohydrolysis of 1,4-beta- glucosidic linkages in cellulose, lichenin and cereal beta-D- glucans [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the glycosyl hydrolase 5 (cellulase A) family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001547 - InterPro: IPR018087 - InterPro: IPR017853 - InterPro: IPR013781 [H]
Pfam domain/function: PF00150 Cellulase [H]
EC number: =3.2.1.4 [H]
Molecular weight: Translated: 40810; Mature: 40679
Theoretical pI: Translated: 4.68; Mature: 4.68
Prosite motif: PS00659 GLYCOSYL_HYDROL_F5
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTTLSNPKTAISDTRFAKLARGINLSHWFAQDYTNQYSLEHLRTYNTEADIALLAKLGCS CCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHCCHHHHHHHHHCCCCHHHHHHHHHCHH HLRFTLNPVVLLNESNPTELNPSYLAEVDRVIDLMLAHDLAVIVDLHPEDDFKQRLFSSP HEEEEECEEEEEECCCCCCCCHHHHHHHHHHHHHHHHCCEEEEEECCCCHHHHHHHHCCC SLVKIFASFWQRLAAHLAQRDPEMLFLEVLNEPVVTDAQQWAFVQAELLAAMRAGAPNHT HHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCCCE LIATGHKWSSITELLELEPLADPNIIYNFHCYDPHTFTHQAATWGAPYWPYLEYLPYPSS EEEECCCHHHHHHHHHHCCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCHHHHCCCCCC PEALAPIVATIDDDVARDAAINYGNERWNIDTLREWIGQAAAWAEQHQVRLTCNEFGVYR CHHHHHHHHHCCHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCEEEEEECCCCEEE FKSKPEDRAAWLHDLRSVLEEFNIGWTMWDYAGGFSVVNQLSGQREIDALTVEALGLQQ ECCCCCHHHHHHHHHHHHHHHHCCCEEEHHHCCHHHHHHHHCCCCHHHHEEHHHHCCCC >Mature Secondary Structure TTLSNPKTAISDTRFAKLARGINLSHWFAQDYTNQYSLEHLRTYNTEADIALLAKLGCS CCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHCCHHHHHHHHHCCCCHHHHHHHHHCHH HLRFTLNPVVLLNESNPTELNPSYLAEVDRVIDLMLAHDLAVIVDLHPEDDFKQRLFSSP HEEEEECEEEEEECCCCCCCCHHHHHHHHHHHHHHHHCCEEEEEECCCCHHHHHHHHCCC SLVKIFASFWQRLAAHLAQRDPEMLFLEVLNEPVVTDAQQWAFVQAELLAAMRAGAPNHT HHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCCCE LIATGHKWSSITELLELEPLADPNIIYNFHCYDPHTFTHQAATWGAPYWPYLEYLPYPSS EEEECCCHHHHHHHHHHCCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCHHHHCCCCCC PEALAPIVATIDDDVARDAAINYGNERWNIDTLREWIGQAAAWAEQHQVRLTCNEFGVYR CHHHHHHHHHCCHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCEEEEEECCCCEEE FKSKPEDRAAWLHDLRSVLEEFNIGWTMWDYAGGFSVVNQLSGQREIDALTVEALGLQQ ECCCCCHHHHHHHHHHHHHHHHCCCEEEHHHCCHHHHHHHHCCCCHHHHEEHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 1368690 [H]