Definition Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome.
Accession NC_009972
Length 6,346,587

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The map label for this gene is 159898099

Identifier: 159898099

GI number: 159898099

Start: 1831555

End: 1832973

Strand: Direct

Name: 159898099

Synonym: Haur_1575

Alternate gene names: NA

Gene position: 1831555-1832973 (Clockwise)

Preceding gene: 159898098

Following gene: 159898100

Centisome position: 28.86

GC content: 46.44

Gene sequence:

>1419_bases
ATGGAGGCGCGTTGCATTTTGGAACACCCTAAAAAAGGCATTCGTACATTTCTGATTGTTTGGTTTACCCAATCAATCTC
TGTGATGGGGAGTTCGCTAACCTTTTTTACGATTATTATTTGGCTGACCAAGCATCAATATCCCGATGAATCGCAAAAAC
AACTGTTAGCTTTTGCCTTATCAACCTTGGGCTTGGCGCGTGCCCTAACGACAATCGTGCTAGCTCCGATTGCTGGAGCT
TGGGTTGATCGCCATGATCGGAAGCAGACCATGATTATTGCGAATATAATCAATAGTTTGTTAGCATTTGGCCTGATGGC
GCTTATGCTGGTTAATTCACTCGAATTATGGTCATTGATGCTGCTTCAAGTTGGGCTTGCCGCATCAGGGTCGTTTCATG
CTGCGGCCTTTGATACCGCCTATTCGACCCTGGTTCCGAAGCGTTTTCTGCCGCGGGCTAATGGCATGATGCAAACAATG
TGGTCGCTTTCGACCATTTTAGCCCCGACCGTGGCTGCTGCCTTGATTGCCCTACCGGATATGCTCCGGAAAAGTGGTGG
ATCAGCTGGTTGGACTAGCGTTATTACTAACTTAGCAGATGGCACAGCCTTGACGATTGGGGTTGATGCACTGAGTTTTT
TAATTGTTGCAATCATTCTCAGTTTTCTAACCATTCCATCACCGCAACGAGCTGATTTAAATACCACACAAGGCAAAAAG
AAAAGTCTCTGGCTCGATATTAAGGAAGGGTTTGCCTATATTTGGCAGCGACCAGCGTTCTTATGGTTATTAAGTGCCTT
TACGATTGCCAATTTTGTCGTTTCAACCCGCAGTATTTTTCAGCCGCTGATTCTCAAATTTAATTTGGTTGCCGATTGGA
CGCTGCATGGTTTTTCGTATGATACCGCATTGGCGTTGCTGAGTACATCGGCAAGTGTTGGTGGAATTATTGGGGGCATT
TTTATTAGTTCTTGGGGTGGCTTGAAAACGAAACGGGTTTATGGGGTGTTGTTGCCAATGGTGGTTTTTAGTCTCGGACA
GATTTTGTTTGGATTGGCTTCCTCGATTTACCTAACTGCGATTGCGGCCCTGATCTCCTCAGGCGCGATTCCTATTCTCA
ATGCCCATTCGCAGTCGATTTGGCAAGCCCAAACCCCATCGGAAATTCAGGGTCGCGTGTTTGCAGTCCGACGGTTGATT
GCCCAATGTACGTTGCCACTTGGCACGATGTTAGCCGGAATTTTAGGTGGCTTGTTTAATCCAGGCATGATGATGGCACT
CTTAGGGGTTGGAATGGGCGTGTATTGTTTCTTCCAATTTATGAACCCTACGCTGTTGCAGATCGAGCATGATCCAAATA
ATCCACCCGAGCCTGATCCAAATAATCCGCAACATGGGATACCGCAAACAGCCAAGTAA

Upstream 100 bases:

>100_bases
TGCTGGTAGGATTTTTTGCTCTCGATATTGTGATTGAATTTGCAGCATCAATTGCCTTGACAAAAGCGAATATGCCGATG
TTTAGGGGATTGGTTGTTGT

Downstream 100 bases:

>100_bases
GGCGATGTGGCTAAAACAGTCAGGAGCAAGGGCATAAATGTATGAGTGAAGAACTTATTTTTACCCATAGTGAAGATGGG
GTTGGCTTGGCCGGAGTGAT

Product: major facilitator transporter

Products: NA

Alternate protein names: Macrolide-Efflux Protein; Non-Ribosomal Peptide Synthetase-Like Protein; Facilitator Family Transporter; Amino Acid Adenylation Domain-Containing Protein; Facilitator Superfamily Transporter; Facilitator Superfamily Protein; Amino Acid Adenylation Domain Protein; Transporter Facilitator Family; ABC Transporter Permease Protein; Macrolide-Efflux Transmembrane Protein; Non-Ribosomal Peptide Synthetase; ABC Transporter Permease; Non-Ribosomal Peptide Synthetase/Polyketide Synthase; Facilitator Superfamily Mfs-1 Family Protein; H+ Antiporter Protein; Facilitator Superfamily MacrolideCation Symporter; Macrolide-Efflux Pump; Macrolide Efflux Protein; Facilitator Family Protein

Number of amino acids: Translated: 472; Mature: 472

Protein sequence:

>472_residues
MEARCILEHPKKGIRTFLIVWFTQSISVMGSSLTFFTIIIWLTKHQYPDESQKQLLAFALSTLGLARALTTIVLAPIAGA
WVDRHDRKQTMIIANIINSLLAFGLMALMLVNSLELWSLMLLQVGLAASGSFHAAAFDTAYSTLVPKRFLPRANGMMQTM
WSLSTILAPTVAAALIALPDMLRKSGGSAGWTSVITNLADGTALTIGVDALSFLIVAIILSFLTIPSPQRADLNTTQGKK
KSLWLDIKEGFAYIWQRPAFLWLLSAFTIANFVVSTRSIFQPLILKFNLVADWTLHGFSYDTALALLSTSASVGGIIGGI
FISSWGGLKTKRVYGVLLPMVVFSLGQILFGLASSIYLTAIAALISSGAIPILNAHSQSIWQAQTPSEIQGRVFAVRRLI
AQCTLPLGTMLAGILGGLFNPGMMMALLGVGMGVYCFFQFMNPTLLQIEHDPNNPPEPDPNNPQHGIPQTAK

Sequences:

>Translated_472_residues
MEARCILEHPKKGIRTFLIVWFTQSISVMGSSLTFFTIIIWLTKHQYPDESQKQLLAFALSTLGLARALTTIVLAPIAGA
WVDRHDRKQTMIIANIINSLLAFGLMALMLVNSLELWSLMLLQVGLAASGSFHAAAFDTAYSTLVPKRFLPRANGMMQTM
WSLSTILAPTVAAALIALPDMLRKSGGSAGWTSVITNLADGTALTIGVDALSFLIVAIILSFLTIPSPQRADLNTTQGKK
KSLWLDIKEGFAYIWQRPAFLWLLSAFTIANFVVSTRSIFQPLILKFNLVADWTLHGFSYDTALALLSTSASVGGIIGGI
FISSWGGLKTKRVYGVLLPMVVFSLGQILFGLASSIYLTAIAALISSGAIPILNAHSQSIWQAQTPSEIQGRVFAVRRLI
AQCTLPLGTMLAGILGGLFNPGMMMALLGVGMGVYCFFQFMNPTLLQIEHDPNNPPEPDPNNPQHGIPQTAK
>Mature_472_residues
MEARCILEHPKKGIRTFLIVWFTQSISVMGSSLTFFTIIIWLTKHQYPDESQKQLLAFALSTLGLARALTTIVLAPIAGA
WVDRHDRKQTMIIANIINSLLAFGLMALMLVNSLELWSLMLLQVGLAASGSFHAAAFDTAYSTLVPKRFLPRANGMMQTM
WSLSTILAPTVAAALIALPDMLRKSGGSAGWTSVITNLADGTALTIGVDALSFLIVAIILSFLTIPSPQRADLNTTQGKK
KSLWLDIKEGFAYIWQRPAFLWLLSAFTIANFVVSTRSIFQPLILKFNLVADWTLHGFSYDTALALLSTSASVGGIIGGI
FISSWGGLKTKRVYGVLLPMVVFSLGQILFGLASSIYLTAIAALISSGAIPILNAHSQSIWQAQTPSEIQGRVFAVRRLI
AQCTLPLGTMLAGILGGLFNPGMMMALLGVGMGVYCFFQFMNPTLLQIEHDPNNPPEPDPNNPQHGIPQTAK

Specific function: Unknown

COG id: COG0477

COG function: function code GEPR; Permeases of the major facilitator superfamily

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 51183; Mature: 51183

Theoretical pI: Translated: 9.99; Mature: 9.99

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEARCILEHPKKGIRTFLIVWFTQSISVMGSSLTFFTIIIWLTKHQYPDESQKQLLAFAL
CCCCCCHHCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHH
STLGLARALTTIVLAPIAGAWVDRHDRKQTMIIANIINSLLAFGLMALMLVNSLELWSLM
HHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LLQVGLAASGSFHAAAFDTAYSTLVPKRFLPRANGMMQTMWSLSTILAPTVAAALIALPD
HHHHHHCCCCCCCHHHHHHHHHHHCCHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
MLRKSGGSAGWTSVITNLADGTALTIGVDALSFLIVAIILSFLTIPSPQRADLNTTQGKK
HHHHCCCCCHHHHHHHHHCCCCEEEEHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCC
KSLWLDIKEGFAYIWQRPAFLWLLSAFTIANFVVSTRSIFQPLILKFNLVADWTLHGFSY
HHEEEEHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCCH
DTALALLSTSASVGGIIGGIFISSWGGLKTKRVYGVLLPMVVFSLGQILFGLASSIYLTA
HHHHHHHHCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IAALISSGAIPILNAHSQSIWQAQTPSEIQGRVFAVRRLIAQCTLPLGTMLAGILGGLFN
HHHHHCCCCCEEEECCCHHHHCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCC
PGMMMALLGVGMGVYCFFQFMNPTLLQIEHDPNNPPEPDPNNPQHGIPQTAK
HHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MEARCILEHPKKGIRTFLIVWFTQSISVMGSSLTFFTIIIWLTKHQYPDESQKQLLAFAL
CCCCCCHHCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHH
STLGLARALTTIVLAPIAGAWVDRHDRKQTMIIANIINSLLAFGLMALMLVNSLELWSLM
HHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LLQVGLAASGSFHAAAFDTAYSTLVPKRFLPRANGMMQTMWSLSTILAPTVAAALIALPD
HHHHHHCCCCCCCHHHHHHHHHHHCCHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
MLRKSGGSAGWTSVITNLADGTALTIGVDALSFLIVAIILSFLTIPSPQRADLNTTQGKK
HHHHCCCCCHHHHHHHHHCCCCEEEEHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCC
KSLWLDIKEGFAYIWQRPAFLWLLSAFTIANFVVSTRSIFQPLILKFNLVADWTLHGFSY
HHEEEEHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCCH
DTALALLSTSASVGGIIGGIFISSWGGLKTKRVYGVLLPMVVFSLGQILFGLASSIYLTA
HHHHHHHHCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IAALISSGAIPILNAHSQSIWQAQTPSEIQGRVFAVRRLIAQCTLPLGTMLAGILGGLFN
HHHHHCCCCCEEEECCCHHHHCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCC
PGMMMALLGVGMGVYCFFQFMNPTLLQIEHDPNNPPEPDPNNPQHGIPQTAK
HHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA