| Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
|---|---|
| Accession | NC_009972 |
| Length | 6,346,587 |
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The map label for this gene is 159897996
Identifier: 159897996
GI number: 159897996
Start: 1715842
End: 1716300
Strand: Direct
Name: 159897996
Synonym: Haur_1471
Alternate gene names: NA
Gene position: 1715842-1716300 (Clockwise)
Preceding gene: 159897995
Following gene: 159897998
Centisome position: 27.04
GC content: 48.8
Gene sequence:
>459_bases ATGCGCTGGCGTTTTGGATTATTGAGCTGTTTGAGCATTATCTTGCTGAGTTGTGCCTCCCAAACCCCTGATCAACCAAC CCCAACTGCCTTTGGTGATTTATCGGCAATTACCGCTGGCACAGGCTATATTCAAATATTTTCAGGCATGCCTAATCCAA GTTGGCTTTTGAATGCGAATGCTGTTGATGCGATTCAACAGGTACTCCAAACCGCTACGCCAGCTACCACCCGCCCCGAA CCACCAGGTTTAGGCTATAGCGGTATGTATCTAGAGCTTATGAGCACTGGCATGCCGCTGCGATTGACGGTTTTTGGCGA AGTCATTGCCGTAGAACAAGGCGCTTCAACCCACTATTTGAACGATCCGAATCACGTTTTTGAGCGCTGGCTGCTCGAAC AAGCTCGCCCACAGCTCCAACCTGCAATCTATGCCATGATCAAAAAGAACTTGCCATAA
Upstream 100 bases:
>100_bases TCGCAGCATTTGCGAGAGGGTTTTTGTTGCCCTGCATTAATTATTAACTCATGTGATTCTGGTAGGCTTAGCTTAATTAA TCACGTTGTGAGGATTAACG
Downstream 100 bases:
>100_bases TTATTTAGTGCTGATCAGTTGCAGATTGCTCAATTGCAGGCTGATTAGCCGTTGATCGCCGTTGTTGGCAATTGCGTCGC CGGTTGTCGCTGGTTCAAGT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 152; Mature: 152
Protein sequence:
>152_residues MRWRFGLLSCLSIILLSCASQTPDQPTPTAFGDLSAITAGTGYIQIFSGMPNPSWLLNANAVDAIQQVLQTATPATTRPE PPGLGYSGMYLELMSTGMPLRLTVFGEVIAVEQGASTHYLNDPNHVFERWLLEQARPQLQPAIYAMIKKNLP
Sequences:
>Translated_152_residues MRWRFGLLSCLSIILLSCASQTPDQPTPTAFGDLSAITAGTGYIQIFSGMPNPSWLLNANAVDAIQQVLQTATPATTRPE PPGLGYSGMYLELMSTGMPLRLTVFGEVIAVEQGASTHYLNDPNHVFERWLLEQARPQLQPAIYAMIKKNLP >Mature_152_residues MRWRFGLLSCLSIILLSCASQTPDQPTPTAFGDLSAITAGTGYIQIFSGMPNPSWLLNANAVDAIQQVLQTATPATTRPE PPGLGYSGMYLELMSTGMPLRLTVFGEVIAVEQGASTHYLNDPNHVFERWLLEQARPQLQPAIYAMIKKNLP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16620; Mature: 16620
Theoretical pI: Translated: 5.64; Mature: 5.64
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 3.9 %Met (Translated Protein) 5.3 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 3.9 %Met (Mature Protein) 5.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRWRFGLLSCLSIILLSCASQTPDQPTPTAFGDLSAITAGTGYIQIFSGMPNPSWLLNAN CCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHCCCCEEEEECCCCCCCEEEECH AVDAIQQVLQTATPATTRPEPPGLGYSGMYLELMSTGMPLRLTVFGEVIAVEQGASTHYL HHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHCCCCEEEEEHHHEEEEECCCCCCCC NDPNHVFERWLLEQARPQLQPAIYAMIKKNLP CCHHHHHHHHHHHHHCHHHHHHHHHHHHHCCC >Mature Secondary Structure MRWRFGLLSCLSIILLSCASQTPDQPTPTAFGDLSAITAGTGYIQIFSGMPNPSWLLNAN CCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHCCCCEEEEECCCCCCCEEEECH AVDAIQQVLQTATPATTRPEPPGLGYSGMYLELMSTGMPLRLTVFGEVIAVEQGASTHYL HHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHCCCCEEEEEHHHEEEEECCCCCCCC NDPNHVFERWLLEQARPQLQPAIYAMIKKNLP CCHHHHHHHHHHHHHCHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA